Basic Information

Insect: Ephemera danica
Gene Symbol: L_1
Assembly: GCA_000507165.2
Location: KZ501762.1:2362389-2391814[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 9.1e-05 0.0062 16.9 0.7 1 23 155 177 155 177 0.98

2 21 1.6 1.1e+02 3.6 4.8 1 23 183 205 183 205 0.97

3 21 8.7e-07 5.9e-05 23.3 2.3 1 23 211 233 211 233 0.99

4 21 0.0017 0.12 12.9 0.2 1 23 239 261 239 261 0.98

5 21 0.05 3.4 8.3 0.6 1 23 449 472 449 472 0.90

6 21 3.5 2.4e+02 2.5 0.1 2 23 486 508 485 508 0.82

7 21 0.0038 0.25 11.9 0.5 3 23 541 561 540 561 0.99

8 21 0.00081 0.055 14.0 0.1 1 23 587 609 587 609 0.94

9 21 0.00015 0.01 16.3 0.6 1 23 617 640 617 640 0.95

10 21 1.2 84 3.9 0.1 1 23 645 668 645 668 0.89

11 21 3.3 2.2e+02 2.6 0.5 8 23 685 700 675 701 0.79

12 21 0.011 0.73 10.4 0.4 2 23 729 751 728 751 0.92

13 21 0.0013 0.085 13.4 0.6 1 23 755 778 755 778 0.97

14 21 9.2e-05 0.0062 16.9 2.6 2 23 835 856 834 857 0.94

15 21 0.0014 0.091 13.3 2.2 1 23 877 900 877 900 0.97

16 21 0.058 3.9 8.1 0.2 2 23 908 929 907 929 0.97

17 21 0.21 14 6.4 0.1 3 23 988 1009 986 1009 0.92

18 21 6.3 4.2e+02 1.7 0.1 1 23 1024 1047 1024 1047 0.89

19 21 0.56 38 5.0 2.9 2 23 1054 1075 1053 1075 0.91

20 21 0.00049 0.033 14.7 0.0 1 23 1083 1105 1083 1105 0.96

21 21 0.022 1.5 9.5 4.0 1 23 1112 1134 1112 1134 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	9.1e-05	0.0062	16.9	0.7	1	23	155	177	155	177	0.98
2	21	1.6	1.1e+02	3.6	4.8	1	23	183	205	183	205	0.97
3	21	8.7e-07	5.9e-05	23.3	2.3	1	23	211	233	211	233	0.99
4	21	0.0017	0.12	12.9	0.2	1	23	239	261	239	261	0.98
5	21	0.05	3.4	8.3	0.6	1	23	449	472	449	472	0.90
6	21	3.5	2.4e+02	2.5	0.1	2	23	486	508	485	508	0.82
7	21	0.0038	0.25	11.9	0.5	3	23	541	561	540	561	0.99
8	21	0.00081	0.055	14.0	0.1	1	23	587	609	587	609	0.94
9	21	0.00015	0.01	16.3	0.6	1	23	617	640	617	640	0.95
10	21	1.2	84	3.9	0.1	1	23	645	668	645	668	0.89
11	21	3.3	2.2e+02	2.6	0.5	8	23	685	700	675	701	0.79
12	21	0.011	0.73	10.4	0.4	2	23	729	751	728	751	0.92
13	21	0.0013	0.085	13.4	0.6	1	23	755	778	755	778	0.97
14	21	9.2e-05	0.0062	16.9	2.6	2	23	835	856	834	857	0.94
15	21	0.0014	0.091	13.3	2.2	1	23	877	900	877	900	0.97
16	21	0.058	3.9	8.1	0.2	2	23	908	929	907	929	0.97
17	21	0.21	14	6.4	0.1	3	23	988	1009	986	1009	0.92
18	21	6.3	4.2e+02	1.7	0.1	1	23	1024	1047	1024	1047	0.89
19	21	0.56	38	5.0	2.9	2	23	1054	1075	1053	1075	0.91
20	21	0.00049	0.033	14.7	0.0	1	23	1083	1105	1083	1105	0.96
21	21	0.022	1.5	9.5	4.0	1	23	1112	1134	1112	1134	0.97

Sequence Information

Coding Sequence: atgttatttaaagGTAATAGTAGTCGTTTAgaacttttaattgaaaaaattcaagcaaataaagaaaatactACAGCACATGATTTAAAAGAGGCCCTGGGCTCGGACCCTGGAAGCACAAGTAGCTGGCGTTCCACAGACACAGTACTGGAGGAGGACGACGCTCGCTCCGAGGATTTGGACGAAGATTTGGACGAGGACAGCGTCTCGACTGCGGCTGCCGGTAACGTTCCAGCCACTGCAGCCGCGGGCTTGCTACGAAGGTCGGGAGCAATAGTTGCGGCGAGTGCGGCCACAGCGGCCGGGAGCAGCACCACGGTGGCGGCGGGCGGTGTCAAGGCGACCCGGCGCAGCGTGTCGAGCGCCTCCTCCAGCTCGGTGTGCTCGTCCGGTTCCCATAGCAGCGTCCCAGGCGCCCCAGAGGACCTCGGCTTCACGCTGGGGGTGACTGAGGCAACGCCTTATCCATGCCAGTTCTGCGCCAAGGCTTTCCCCAGACTCAGCTACCTCAAGAAACACGAGCAGAGTCACGCAGAACATATGCCGTTCCGATGCGAGTTTTGTGCTCGCCTCTTTAAACACAAACGAAGCCGTGATCGTCACGTGAAACTGCATACTGGAGACCGCAAGTACAGATGTACGCAATGCGAGGCCGCTTTCTCACGCAGCGATCACCTGAAGATCCACATGAAGACGCACGACACTCAGAAGCCGTTCCAGTGCTCGGCATGTAACCGCGGCTACAACACTGCGGCTGCACTGACCTCGCACTCGCAGACTCACAAGCGTCCACCCTCATTGCCGGCCTCGCTGCCCCCGCGATCCAGCCCGCACCAGCAAACGCTCTCTCGCAGCCCTCCATCTGCCCCCACGCCCACGCGACGTGTCACCCCTGCCCCACCCAGTCCAGCTCCTGCCTTCCCGAGGAACCTACCGGGACCAGGACACCACGAGCTGCTGAGAGCACATCCTGCAGCCGCCGCCGCTGCTGCCGTGCTCTTCAATCGCGAGTTGCAGCAgGTTCTCCAGCAGCAACAGGAGGCGAGTGCCCGAGGTGGCGGGTCACCCCCGAGTGCTCGCAGTGCCCTGAACGCTGCCGCCATGGCCGCAGCCGCACTGGCCCACTCGGCTGGTCTCCAGTTCGCCGCACCCACTCTGGCGTGCATCTACTGCACCAAGGACAGCTTCACCAGCATGGAGAGTCTGCAACTGCACGTGCAAGCGATGCACGGTTCGATTTTGAATGGTGAAATTCGCGAGTACCAACCGCCCTCCCCAGCACACCACATGACGTCACAATCTGCGAAGCACGCCGCACCAAGTCCGACTCACCAGCACGAACCATTCTCGTGTGACTTCTGTACGATGAAGTTCGACAACATGCAAGGCTTACAGAAGCACAGTCTGGCAGTACACGCGATGCCGGCACCTCCCGCTCCTACAAGTCTCCCACTCACGTGCGCCCAATGTCCCGCGCAGTTCTCTTCACCTGGGCAGCACGCCGAGCACGTGGCAGTGTATCACACCGAGCAATTGAAACCTACGGATCTCAGTAACAAGAAGCCCGCGGCGACCAACGGCAAACGCGCCGACAATAAACTCCCGCAAAACACGTTACTCTGTAGTCAATGCAACGCTCCGTTCCCTGATTTTGAATCATTTCGCACTCATTTGAAAACTCATTTGGATGCGGAACAAGGGAAATCCACGTCATCTCACTCCAAACGTACCATGCTGAACAACAACATTGTTCCACACTATCAATGTACCGAATGTGAAGCGACTTTTTCAACTGAAAATGCTCTGGAAATTCATTCTCTTGGGCATTTTCTCACTACGACCACAGAATTCACTTGTCAAAGTTGTCTAAAGTCGTTCCAACGTCCTGacgaattacaaaaacatcTGATGGACATCCACGCTCATCATTTGTATCGTTGTGCGCTTTGTAGAGAGATTTTTGATTCCAGAGTCGGCGCTCAGGTGCATTTCGCAGTGAAACACAGCAATGAAACGCGAGTTTTACGTTGTGTCGCGTGTGGGGATAATTCAGTTAAGTTCCGAACTGAAATGGAATTCACTTTACATGTCCGCGTGCATCATTTGACACCTGCACATTTGGAAGCTCAATCGATGCGACAAGTTGCCAAACCCGATCTAAACTCATCACTTCCCAATCAATTGCGATGTTTATActgcaatgaattttataaatctgaagCTGAGCTTCAGTATCATATCGTAAACTTCCATCAAAAATTGTTCCGATGTAAGATTTGTGATGAAGCTTTCCACGTAGAGTTTCTACTCGACAAACACATGGAATCTGCTCACACGACATCAGCTGAGAAAATCACGAACAATATCGACTCACAGATCGAGTCTAATAAGCACCAAAACGGTGAGAAGGAATTGACGGAGAGTAAGAAATCCATTAATTTCTCGTCTTCTCCGCTGAAACAAAGCAAATCACCGTCGAACAACACGGTAGTTGTGAGTTTGGTGTGCGCTTACTGTAACGAGAACTGCAAATCTCGCAGCGAACTCGAAGCTCACATGAAAAGTCATCACCAAAATAGAACTTCAAATGGAACTCCTCACGCCACCAATGTTACAGGGATAGGTCGACACAAGTGCAACATTTGTGACCAAGTGTGTCCCACGTCGACACTTCTGGCTGAACATAAACTGACAACGCACTGTAAGGTCCTCCACAGCGACCAGTGCAGTATCTGCAAGTCCAGCCTTGCAGGAGAGGAGCAGTTCTTCGCGCACATGCAAAAACATTGTCCAAACAGTGTGGGGAACAATGAGAACCTGACTTTACCTACCGCGTGTATAATTTGTAGACAAACTGTAACTTCAGACGCCGAGGTACAATTACACGCAAAATTCCATCTACACCAGAAACTACAGGAATACTGTAATAATGCGACGAAAGAAGGTGAATTCTCGCTGGCTTGCAAAGAATGTACGAGTCGATTTGATAACGTCGCTGATTTAGAACTTCACTACGCAAATTTCCATACTAATAATACTGCCTTCCGTATGCCAAAAAATCGTGATTCCTACGAgtgtatttcctgtcaaatCAGTTTTGCTACGGAACTGGAAGTACGGAGTCACGTAGAAAGCACCCACAATTCAGATGACAGTCAAAGGTGTCACCTGTGTCAGGAGAGCTTCGATACTCCACTCAAACTACAGTGTCATCTCATTGAGCATACGTTCGCAGGGTGTCCAACCTTCGCGTGTTACTTGTGTGGTGCTGTGTTCACCGCTTCTGCAGGGCTACAACGTCACATGGTGTCTCATGGTCCTAACTCGAAACCCTACGATTGCAATAAATGCCACTTGAAATTCTACTTCCGTTCTGAGCTCGATAATCACGCTTTCACTCACGATCAGAAATTGGATAACAACGATCTGCAATTGGACTCATCGCTTCACAAACATAAAGTGAAGTCAGAGCAGGAGACGTATCACGGAGAAAACACATTCGATGagcctaaaattaaaaatgaaaacccAGATGAAGAGCAACAATCGGAAGCAATATCACTGACGAATCGAAAACGTAAGTCGGGTACAAATGATTGTCCTGCAGAGAATGGTATAGATTCCGTAATGATCGAAAATGGAGATGATTTAAAACGGCTAAAAACTGAACCAATCGatgaacaaaattga
Protein Sequence: MLFKGNSSRLELLIEKIQANKENTTAHDLKEALGSDPGSTSSWRSTDTVLEEDDARSEDLDEDLDEDSVSTAAAGNVPATAAAGLLRRSGAIVAASAATAAGSSTTVAAGGVKATRRSVSSASSSSVCSSGSHSSVPGAPEDLGFTLGVTEATPYPCQFCAKAFPRLSYLKKHEQSHAEHMPFRCEFCARLFKHKRSRDRHVKLHTGDRKYRCTQCEAAFSRSDHLKIHMKTHDTQKPFQCSACNRGYNTAAALTSHSQTHKRPPSLPASLPPRSSPHQQTLSRSPPSAPTPTRRVTPAPPSPAPAFPRNLPGPGHHELLRAHPAAAAAAAVLFNRELQQVLQQQQEASARGGGSPPSARSALNAAAMAAAALAHSAGLQFAAPTLACIYCTKDSFTSMESLQLHVQAMHGSILNGEIREYQPPSPAHHMTSQSAKHAAPSPTHQHEPFSCDFCTMKFDNMQGLQKHSLAVHAMPAPPAPTSLPLTCAQCPAQFSSPGQHAEHVAVYHTEQLKPTDLSNKKPAATNGKRADNKLPQNTLLCSQCNAPFPDFESFRTHLKTHLDAEQGKSTSSHSKRTMLNNNIVPHYQCTECEATFSTENALEIHSLGHFLTTTTEFTCQSCLKSFQRPDELQKHLMDIHAHHLYRCALCREIFDSRVGAQVHFAVKHSNETRVLRCVACGDNSVKFRTEMEFTLHVRVHHLTPAHLEAQSMRQVAKPDLNSSLPNQLRCLYCNEFYKSEAELQYHIVNFHQKLFRCKICDEAFHVEFLLDKHMESAHTTSAEKITNNIDSQIESNKHQNGEKELTESKKSINFSSSPLKQSKSPSNNTVVVSLVCAYCNENCKSRSELEAHMKSHHQNRTSNGTPHATNVTGIGRHKCNICDQVCPTSTLLAEHKLTTHCKVLHSDQCSICKSSLAGEEQFFAHMQKHCPNSVGNNENLTLPTACIICRQTVTSDAEVQLHAKFHLHQKLQEYCNNATKEGEFSLACKECTSRFDNVADLELHYANFHTNNTAFRMPKNRDSYECISCQISFATELEVRSHVESTHNSDDSQRCHLCQESFDTPLKLQCHLIEHTFAGCPTFACYLCGAVFTASAGLQRHMVSHGPNSKPYDCNKCHLKFYFRSELDNHAFTHDQKLDNNDLQLDSSLHKHKVKSEQETYHGENTFDEPKIKNENPDEEQQSEAISLTNRKRKSGTNDCPAENGIDSVMIENGDDLKRLKTEPIDEQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -