Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ497773.1:1037321-1039876[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00013 0.0089 16.4 0.2 2 23 402 423 401 423 0.97

2 9 8.4e-05 0.0057 17.1 1.3 1 23 430 452 430 452 0.98

3 9 7e-07 4.7e-05 23.6 2.5 3 23 504 525 502 525 0.96

4 9 0.0011 0.072 13.6 2.3 3 23 626 647 624 647 0.94

5 9 1.7e-05 0.0012 19.2 1.9 2 23 691 712 690 712 0.97

6 9 1.3e-06 8.5e-05 22.8 0.5 1 23 718 740 718 740 0.98

7 9 0.00018 0.012 16.0 2.9 1 19 746 764 746 769 0.91

8 9 7.8e-08 5.2e-06 26.6 0.7 1 23 775 797 775 797 0.99

9 9 2.3e-06 0.00015 22.0 2.9 1 23 803 825 803 825 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00013	0.0089	16.4	0.2	2	23	402	423	401	423	0.97
2	9	8.4e-05	0.0057	17.1	1.3	1	23	430	452	430	452	0.98
3	9	7e-07	4.7e-05	23.6	2.5	3	23	504	525	502	525	0.96
4	9	0.0011	0.072	13.6	2.3	3	23	626	647	624	647	0.94
5	9	1.7e-05	0.0012	19.2	1.9	2	23	691	712	690	712	0.97
6	9	1.3e-06	8.5e-05	22.8	0.5	1	23	718	740	718	740	0.98
7	9	0.00018	0.012	16.0	2.9	1	19	746	764	746	769	0.91
8	9	7.8e-08	5.2e-06	26.6	0.7	1	23	775	797	775	797	0.99
9	9	2.3e-06	0.00015	22.0	2.9	1	23	803	825	803	825	0.99

Sequence Information

Coding Sequence: ATGGAAGTAAACACCGACGTTGGAAAATTGTCACCCCATGGAACAGATGACAAAGGTCAGAGCGTTCTTAAAGGACCAAGTACTGAATTGGTTGAGGATGAACATTCTGAAAACCAACATGAAATGGTTATGAACCCTCAATACCTAGATCTGGAACGTAGTGAACCAGGCACGCACCCTGCCGGTACTCAGGTTGTCAAAGTTTCAGCTAATGGACAGTTGGTATCTTGCGAAATGCTTCAGCATGTGACAGGCATGGACAGTGACCAACACCCTGGCTTATTGGTACATGTTTTACCACCCTCCCACTCTGATCTTAAGGAAGCCACAGCGTCTTACTATACTCCTGCTACAACAGCACAGCAACTTCAAAGAGCTGGCACTCTTTTAACAGAAGAACGTTACTTGACTGAACAATTGACCTCACAACATTATGAGGACGATCTCTTGAGTCACGATCTTACAGATGATGACCGTAGATTAGCGGCAGCCCTAATGGCAGTCCAATATTCACAGCAACAAAAACAACAGCATTTAGCAAAGCTTCTTGAACCTGGTAGTATTGTTTGCACAAGTACATCAGAAGCTAATGTCATTATGAGTGTGAGTGATAGTATGCAAGGTCTAATTGCATCGAACCAGCTGGGTAAAGTGGTTTCTGATCCCTCTCAAGGCTCTATGAGCGACATGGTTGTTGAATACATTCAGCAAGTGGAAGGTGCGTCCCACCCTCATGATCCCACTCGCAAGCAAATGAGACTGGTTGCTTATCATTCAGACCCTCAGGGACTGCATCCTTCAGAATCTACCACACATCTTCAGTCAATGGATGAAACTCAGCTGCAAGCACATCATTTAAAAACCATCACACAAACTCCTCCTCAAGTACTGAAGAAGGCGCTCATGAATCCAATGTCTCCTAGGGCCAGATTTAAACGGACAATGGAGGAAAATCATCAAGTGGTGAACCAAGTTGGACTACAAGCTCTTCCAAGTGCAGAATCTGTAATCAGAGATCCTCATAGTACAATGCTTAAGAATGAAGAGGATGAACCAGAGTTTGATACTGATGAGGATTTAGATGATTCAGATTACGAAGTTGAAAGTGAAGCTAGATCTTCAAGGAGAAGTTTGcctcataaaaaaagaatttctcGCAAGTTAAAAACCCCCAGGAAATCACCAGGtcaagataaaatattaaaatgtaccAAATGCCCAGAAACATTCCAAACTCAAGCTGCTTTGTTAGCTCATAAGCAGATACACACTGTTAAGAAACCACTGTTTAATTGTGAAATATGTGGGAAAAATTTTGTTAACCAACTCAAATTTTTTGAACATTTGAAATCCCACTATGAACCAATGAAGAATTCACAAATTGGAGGTGATATGTTGGAAAATGAACCTGTAAAGGAAGAAGATGGCCCTGGAGAAGaggaacaacaacaacaacacactTCGGTGATAGTGCACGATCTTCCACCTGCATTGCCCCCACCACTGGCATGTCATCACTGTGGCAAGATTTTCCGCAGACAAAAGGCCTTGGAGAAGCACATCAGCACTGTCCATGAACAAGTGGAAGAGATGATTGAGGAAGATGTTGATGAAGATGATGGAATGGGGGACCACATGGACAACACAGAATTGTTGCCAGAAGACATGGGAGTGGAGGAGGAAGGAGAGGCCAAGGATGGCTGGTACACCACGCATCACGAGTTAACAGCTGTGCCTGCTGTACCAGTGCAAGAACAAATGACTGAACAGGAGCATGCAAAGTTAGATGGTCAACATGAGCAACCAGTACTCACAGAAATATCAGTTTCTGACTTACCACCAGTTGTAGAAGAGTTCCAACCAAATCATCATCTGTGTGACCATTGTGGGGACAGTTTTGAACTGAAGTCACAACTCACACTACACATGAGAGATGACCACCCTGAGATGAAACGTAAATCAAGGAAAAAGGAGCACATATCTGCAGTGCTAGCAACAGAGGGAGAGAGAACAGAGAACCCTGCTGCAACTGGGGAGAAACCTGTGGGTAACAGGAAGTGGGAGCAGTTAACCTGTCCTACGTGTGGTCGAATGTTTAACCATCGCAATTCCCTGGTGTATCATTTACGCAGCCATACTGGGGAACGCCCACATCAGTGTGAAGTGTGTGGCAAGAGCTTCTTTGCAGCGAGTGCCCTAAAAGTGCACATGCGATTGCATTCCGGAGACAAGCCCTATAAGTGTGAATTGTGTGGTCGCCACTTCAGACAGTGGGGAGATCTCAAGTACCACTGCATCTCCATTCATACAGATGAGAAACAGTATCAGTGTGAATACTGTGGCAAGGATTTCGCCAGAAAGTACAGTCTAATTGTCCACCGGCGTATCCACACTGGAGAAAAGAATTACAAGTGTGAATTCTGCAACAAGACCTTCCGAGCCTCTAGCTACCTACAAAACCACAGACGCATTCATACAGGATAG
Protein Sequence: MEVNTDVGKLSPHGTDDKGQSVLKGPSTELVEDEHSENQHEMVMNPQYLDLERSEPGTHPAGTQVVKVSANGQLVSCEMLQHVTGMDSDQHPGLLVHVLPPSHSDLKEATASYYTPATTAQQLQRAGTLLTEERYLTEQLTSQHYEDDLLSHDLTDDDRRLAAALMAVQYSQQQKQQHLAKLLEPGSIVCTSTSEANVIMSVSDSMQGLIASNQLGKVVSDPSQGSMSDMVVEYIQQVEGASHPHDPTRKQMRLVAYHSDPQGLHPSESTTHLQSMDETQLQAHHLKTITQTPPQVLKKALMNPMSPRARFKRTMEENHQVVNQVGLQALPSAESVIRDPHSTMLKNEEDEPEFDTDEDLDDSDYEVESEARSSRRSLPHKKRISRKLKTPRKSPGQDKILKCTKCPETFQTQAALLAHKQIHTVKKPLFNCEICGKNFVNQLKFFEHLKSHYEPMKNSQIGGDMLENEPVKEEDGPGEEEQQQQHTSVIVHDLPPALPPPLACHHCGKIFRRQKALEKHISTVHEQVEEMIEEDVDEDDGMGDHMDNTELLPEDMGVEEEGEAKDGWYTTHHELTAVPAVPVQEQMTEQEHAKLDGQHEQPVLTEISVSDLPPVVEEFQPNHHLCDHCGDSFELKSQLTLHMRDDHPEMKRKSRKKEHISAVLATEGERTENPAATGEKPVGNRKWEQLTCPTCGRMFNHRNSLVYHLRSHTGERPHQCEVCGKSFFAASALKVHMRLHSGDKPYKCELCGRHFRQWGDLKYHCISIHTDEKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYKCEFCNKTFRASSYLQNHRRIHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00651135;
90% Identity: iTF_00651135;
80% Identity: iTF_00651135;