Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ501791.1:1258304-1272948[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.11 7.1 7.3 0.7 1 23 361 384 361 384 0.95

2 18 0.31 21 5.9 1.9 1 23 389 411 389 412 0.91

3 18 0.00027 0.018 15.5 2.4 1 22 480 501 480 504 0.92

4 18 0.0097 0.66 10.6 6.4 3 23 512 533 510 533 0.95

5 18 0.0047 0.32 11.5 0.5 1 23 539 561 539 561 0.96

6 18 3e-05 0.002 18.5 0.2 1 23 567 589 567 589 0.98

7 18 2.9e-05 0.002 18.5 2.0 1 23 595 617 595 617 0.96

8 18 0.088 6 7.5 2.6 3 23 628 648 627 648 0.98

9 18 0.0001 0.0068 16.8 4.8 1 23 654 676 654 676 0.98

10 18 1.5e-05 0.001 19.4 2.0 1 23 682 704 682 704 0.99

11 18 0.0049 0.33 11.5 0.2 1 23 710 732 710 732 0.98

12 18 0.00068 0.046 14.2 1.5 1 23 755 777 755 777 0.99

13 18 1.5e-05 0.001 19.4 1.8 1 23 783 805 783 805 0.98

14 18 0.18 12 6.6 0.3 1 23 811 833 811 833 0.94

15 18 0.0076 0.51 10.9 1.6 1 23 839 861 839 861 0.98

16 18 1.3e-07 9e-06 25.9 3.5 1 23 867 889 867 889 0.98

17 18 5.1e-06 0.00034 20.9 0.4 1 23 895 917 895 917 0.98

18 18 0.52 35 5.1 1.7 2 23 924 945 924 945 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.11	7.1	7.3	0.7	1	23	361	384	361	384	0.95
2	18	0.31	21	5.9	1.9	1	23	389	411	389	412	0.91
3	18	0.00027	0.018	15.5	2.4	1	22	480	501	480	504	0.92
4	18	0.0097	0.66	10.6	6.4	3	23	512	533	510	533	0.95
5	18	0.0047	0.32	11.5	0.5	1	23	539	561	539	561	0.96
6	18	3e-05	0.002	18.5	0.2	1	23	567	589	567	589	0.98
7	18	2.9e-05	0.002	18.5	2.0	1	23	595	617	595	617	0.96
8	18	0.088	6	7.5	2.6	3	23	628	648	627	648	0.98
9	18	0.0001	0.0068	16.8	4.8	1	23	654	676	654	676	0.98
10	18	1.5e-05	0.001	19.4	2.0	1	23	682	704	682	704	0.99
11	18	0.0049	0.33	11.5	0.2	1	23	710	732	710	732	0.98
12	18	0.00068	0.046	14.2	1.5	1	23	755	777	755	777	0.99
13	18	1.5e-05	0.001	19.4	1.8	1	23	783	805	783	805	0.98
14	18	0.18	12	6.6	0.3	1	23	811	833	811	833	0.94
15	18	0.0076	0.51	10.9	1.6	1	23	839	861	839	861	0.98
16	18	1.3e-07	9e-06	25.9	3.5	1	23	867	889	867	889	0.98
17	18	5.1e-06	0.00034	20.9	0.4	1	23	895	917	895	917	0.98
18	18	0.52	35	5.1	1.7	2	23	924	945	924	945	0.91

Sequence Information

Coding Sequence: ATGAGTCGGGTCAGGCGTAAAGGTTCTGCATTACTAAATTTGAAAGAGACACCTCAAGAGTTCCTTCACACCcaagaaaaatcatttaaagtATCCAATAATGGCGAACTTTATCCATTTTCTCCTGAGACTGACAGTTTGCAGAGATTGAGAAGGGATCACAACCTAGCTAGTTGTGAGCCTACAGTTGAAGTGCATTTTGGGGCCATTGGAAATGAAATCAATAACCTCAGTGATGTGCCAATATTTGAAGTTGTTGTCAATGGAGATGAATCCTGTGGTGTTGCTTCTACCACAAAAATTGATGTCGGTGAACAGCAACCTTTCTTGTACTTGAATGACACGTTGGAGATGCAGGAACAAGAGGATGTGTTTCAGCACTTGGGCGAAGACCCACCTTTAGAATTACCTCTCACGTCAGAGTTGTGTCGCATTTGTGCTTGTCAAAGTTCTGAGCTTATGCAGATTTATGGAGATGAAGGGCAACATCTGCAGCTTGCTAACAAGATTACACAGCATCTACCAATCACGgTATGCGACACTGATCGTCTCCCTCTTCACGTGTGTGAGACATGTGTAGCTCAACTAAATATGTGCCACGAGCTGGTCAGGATATGTGGAGAAGCAGATCTTCGATTGAGATTGCTGTTGGACCAGGAAGAAAGGCAAAAGGAAAGACAGGCTTTATCTGTCCTGAATGTCAAAAGCTTTGGTAGACCTGTGGAAGAACAACTGaccagtgaaaattttgttgagTCATCTGATCTAGTCCAACAAAAAATGCATGAGATTGTAGAAGGAGAGTCGGGAATACCAGTCATTTCACAAGTCAAATCACTGCAGCAGTCTCTTACTTCTGGGATGCTGCAGGATGGGAAGCcatcaaaatttaaagttgTGGTTGTCAAACTCAGCAACAAAGGCAAGAGTCTCTCTAAAGAGGAAcaaatagcaaaagctttggAGATGATTAAATCAGGGGATCAAGTTAAACAACAAGGGGGCTCTGATGGAGAACACCAAGGAATGAGTTGGGGCAATGAAGGCAGATCCAGCACTGATCAGTGGGCCACACATACCTTCTTGTGCAGCATCTGCAGTGAAACTGTAGTGGGCTCTCATACTTTCCTGTTGCATCAGCAAACTGAGCACAACATTCATCTATATCACTGCAGTGTTTGCAACACCTTCTACGACACTCCAGAGGTACTGGAACTGCACTCTACGGAGCATCATCCACAGCAAGAGAAAAGCAACGAGAATgtgaaaattacaaatgttGCTGAAATCCAGTTAATGAATACCGCTCAGACATCATCAAGTTCTTCAAATTTGTGTATGAAAGTATCGAAAGAATTCGATAAAATGGATAAAGTGTTAAAATCAAAAATTGTTGATGCTATTCAAGACATGGTAATGCAAGATCAACTTACAAAATTCCAATGTGGTGTATGCAAGGAACATTTCAATACCAAGGAATTACTAAACAAACACCGTAAAGAAACTCTACATAAAACTGTTAGACCTATTAACTGCAGTTTATGCAAAACCACATTCAAAAACCATCAAGAATTACAAAAACACAAACACACATCTCATGATGATTTGAAATCATTCATTTGCAATTATTGTGAAATGAAATTCCTCACTAAGGGTCTTCTTCTCCGTCACATTACAGAACACGAGGAATATAAAGCTTTCACATGTGCTGAATGTGGAAAAGGTTACAATAGTAAAAGTGGCTATGAAATTCATTTATCAACCCATAAAACAGAAAAACCTTATTTGTGTGACTTGTGTGGAAAGGGCTTCAAACATGTAAGTAATCTAAAAGGTCACAAACGCTCACACTTATCAGATGAAGACAAAAAGAGGCATGGATGTCTTTACTGTGAAAAGAGGTTTCGATGCAAGTTCTTGGTGGAAGAGCATATGCGAATGCATACTGGGGAACGGCCTTTTGAATGCAATGTTTGCCATAAACGTTTCTATAAAAAACAGCAATTAAAGCAACACACACTTGTACATTCTACTGAAAACATATATGAGTGCCACATTTGTGGTTCTCGTTTTAATCGCCGAGGCAACATGATGGAGCACATTAAAAAACACGTGATGACCAAAAGATATACCTGCCGAGTGTGTAAAGAAGGATTTGAGACAATTAGCCAAATTGTGGCTCATAGGAAAATTCATTCAACTGAAGAAGTGGCTCAAAGTAAAATTCTAGAAGATGGTACTGGTGATAAAGAGAGTTCAAGCTTCCAGTGCCACATCTGTCAAAAATACTTGGCTTCAAAGTTGTCTTTAGTCTCCCATCTTAGAATTCACACAGGAGAAAAACCATTTTCTTGTGAATTTTGTGGACAGAGGTTTTCACAGAAACCAGCTTTAACATACCACAGAAGAAGACATACAGGAGAAAAGCCATTCGTGTGTTCATATTGTAACGAAGGATTCTTGTCACGCAATGCCAAAAATATCCACGAAAGAATACATACAGGCGAGAAACCGTATACCTGCTATGTGTGCAGCACATCATTCCGTTGTGCTGCTAGTTTGACTCAACATTTATTAGTGCACAGCGACCAACGACCGTTCTCCTGTTCACACTGTAACAAAACTTTCCGGAGACGAGAAGCGTTGCGGGTGCACATGAGGATACACACGGGTGAAAAACCATATGCATGTGATCTGTGTGGCAGAGCGTTCACTCAGCGAGGCGACATGGTCAAGCATAAGAGAACACATGCTAACGAGAAGCCTAACCGGTGCAGGTACTGTGACTTTACTAGCACATCTAGGAAAGATATAAAGCAGCATGAAGCTTTTCACCCAGTAGACACAGATTCTACCATCATTTCTTCTGATAATCTTTTAACCTCCTTTCCTGAAATAACTATTGTTGGACAAGACTGTGACTCTATGATGCTAGGCAGTGAAGAAGTCCAAGAAATTGTAGAAGATGAAATTCAATAA
Protein Sequence: MSRVRRKGSALLNLKETPQEFLHTQEKSFKVSNNGELYPFSPETDSLQRLRRDHNLASCEPTVEVHFGAIGNEINNLSDVPIFEVVVNGDESCGVASTTKIDVGEQQPFLYLNDTLEMQEQEDVFQHLGEDPPLELPLTSELCRICACQSSELMQIYGDEGQHLQLANKITQHLPITVCDTDRLPLHVCETCVAQLNMCHELVRICGEADLRLRLLLDQEERQKERQALSVLNVKSFGRPVEEQLTSENFVESSDLVQQKMHEIVEGESGIPVISQVKSLQQSLTSGMLQDGKPSKFKVVVVKLSNKGKSLSKEEQIAKALEMIKSGDQVKQQGGSDGEHQGMSWGNEGRSSTDQWATHTFLCSICSETVVGSHTFLLHQQTEHNIHLYHCSVCNTFYDTPEVLELHSTEHHPQQEKSNENVKITNVAEIQLMNTAQTSSSSSNLCMKVSKEFDKMDKVLKSKIVDAIQDMVMQDQLTKFQCGVCKEHFNTKELLNKHRKETLHKTVRPINCSLCKTTFKNHQELQKHKHTSHDDLKSFICNYCEMKFLTKGLLLRHITEHEEYKAFTCAECGKGYNSKSGYEIHLSTHKTEKPYLCDLCGKGFKHVSNLKGHKRSHLSDEDKKRHGCLYCEKRFRCKFLVEEHMRMHTGERPFECNVCHKRFYKKQQLKQHTLVHSTENIYECHICGSRFNRRGNMMEHIKKHVMTKRYTCRVCKEGFETISQIVAHRKIHSTEEVAQSKILEDGTGDKESSSFQCHICQKYLASKLSLVSHLRIHTGEKPFSCEFCGQRFSQKPALTYHRRRHTGEKPFVCSYCNEGFLSRNAKNIHERIHTGEKPYTCYVCSTSFRCAASLTQHLLVHSDQRPFSCSHCNKTFRRREALRVHMRIHTGEKPYACDLCGRAFTQRGDMVKHKRTHANEKPNRCRYCDFTSTSRKDIKQHEAFHPVDTDSTIISSDNLLTSFPEITIVGQDCDSMMLGSEEVQEIVEDEIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -