Basic Information

Insect: Ephemera danica
Gene Symbol: -
Assembly: GCA_000507165.2
Location: KZ501794.1:978896-987711[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0019 0.13 12.8 3.9 1 21 342 362 342 364 0.95

2 16 0.0001 0.0068 16.8 0.8 2 23 371 392 370 392 0.97

3 16 3.6e-07 2.4e-05 24.5 2.4 1 23 398 421 398 421 0.97

4 16 1.8e-06 0.00012 22.3 1.4 1 23 428 450 428 450 0.98

5 16 4.5e-05 0.003 17.9 1.7 1 23 456 478 456 478 0.98

6 16 3.3e-05 0.0022 18.3 0.2 2 23 486 506 486 506 0.96

7 16 0.00024 0.016 15.6 0.2 1 23 510 533 510 533 0.96

8 16 2.4e-05 0.0016 18.8 2.6 1 23 539 562 539 562 0.97

9 16 5.3e-06 0.00036 20.8 0.7 1 23 568 591 568 591 0.97

10 16 5.5e-06 0.00037 20.8 1.7 1 23 598 620 598 620 0.98

11 16 5.9e-05 0.004 17.5 0.3 1 23 626 648 626 648 0.95

12 16 0.0017 0.11 13.0 5.5 1 23 654 676 654 676 0.98

13 16 0.57 38 5.0 0.2 9 23 688 703 686 703 0.93

14 16 5.5e-06 0.00037 20.8 1.7 1 23 710 732 710 732 0.98

15 16 5.9e-05 0.004 17.5 0.3 1 23 738 760 738 760 0.95

16 16 0.0017 0.11 13.0 5.5 1 23 766 788 766 788 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0019	0.13	12.8	3.9	1	21	342	362	342	364	0.95
2	16	0.0001	0.0068	16.8	0.8	2	23	371	392	370	392	0.97
3	16	3.6e-07	2.4e-05	24.5	2.4	1	23	398	421	398	421	0.97
4	16	1.8e-06	0.00012	22.3	1.4	1	23	428	450	428	450	0.98
5	16	4.5e-05	0.003	17.9	1.7	1	23	456	478	456	478	0.98
6	16	3.3e-05	0.0022	18.3	0.2	2	23	486	506	486	506	0.96
7	16	0.00024	0.016	15.6	0.2	1	23	510	533	510	533	0.96
8	16	2.4e-05	0.0016	18.8	2.6	1	23	539	562	539	562	0.97
9	16	5.3e-06	0.00036	20.8	0.7	1	23	568	591	568	591	0.97
10	16	5.5e-06	0.00037	20.8	1.7	1	23	598	620	598	620	0.98
11	16	5.9e-05	0.004	17.5	0.3	1	23	626	648	626	648	0.95
12	16	0.0017	0.11	13.0	5.5	1	23	654	676	654	676	0.98
13	16	0.57	38	5.0	0.2	9	23	688	703	686	703	0.93
14	16	5.5e-06	0.00037	20.8	1.7	1	23	710	732	710	732	0.98
15	16	5.9e-05	0.004	17.5	0.3	1	23	738	760	738	760	0.95
16	16	0.0017	0.11	13.0	5.5	1	23	766	788	766	788	0.98

Sequence Information

Coding Sequence: ATGACAGAGATCGCGATGGAGGAGCCATACATCATCTGTCACCAGAGTTACTACGAGCACTTGATGGGCTCGCTGCGACGTCTGGAGTCTCTCATGGACACACACTTGGTTTTGGCGGGAAACGAGCTGGCCGCCATTCACGGCTTTGTTCTTGGAGCCCTCAGCAGTTACGTGCAAACATTACCTCGTGCAGCCAACCAGGCTGCGACCACGTACATCCTACTGCGTGAACTGGACCCGTGGAGCGTGCGTTGTCTGCTCGAGTATTTCCACTCTGGCGCGCTGATCGTCCCCAAACACAGTTTGCCATGCATGGACCGCATTTTACAAACCTTGGACGTTTCACTGGGAAGTGAGTTCTTTGAAAGTGAAGATTCAGTACATTTTAGTTTAAGCCAAGCTTTGAAATGCACCGTCATTGACACAATTTGGTTAAACAGAGAACATAACTATGACGTCAAGATACGTACTGAAGGCATGCATGAAACATTCGCCCACGCGGCTGTCTTGTCTGCGTGTAGTGAACAGCTTTCAACGTTGTTCCGTGCTGCTCAAAATTCTCGTCCAACTCTGATTGTTCTCCTTGATTTTCATCTGCAAGACGTCGAGTGTGTGTTACGTTTTTGTTACAAAGGTGAAACAGAAATTCCGAGAGAAAGAGCTCGTGCGGTGCTCAACTTAAGTCCTTACTTTAAACCTCTGTTTGAACTCAGCAATTGGCGCCACTCTCTTGTATTTCTGTCCGAACTCTCTCTGGATATAGTGCAGGCATTTGTGGACTATATGTATTACGGAGAGGTGTTGTTTACTGGTGGACTGACTGAATTTGCAACTGCCGTGAATGGTCTCATTGACTTTTCCATGTTGCCAGCGAACAATGTTGAACCTCAATGGAGTTCCATCGATCAACTTCCACCTCCCCAGTTGGAACCACCCCCACCACCACAAATGGAACCTCCGCCTGAAGTACAACAAAGTGAGCCATCTACAGAGACTTCTCAAACCAATGGTACTCCATTAACCTACACCTGTGATATATGTTCGGAAACTTTTTACAGCAGACGATCTTTGAAACTACATCTAAAGTGCCATCCTGAATCTGGGAACCTTCAATGCCAGTATTGTGACCAACAGTTCACCAAACCTAGTGCAAGACGAGCTCATGAACGGACTCATACTGGAGCGAAATCTCACGTTTGTCAGACGTGCGGGAAAACATACACCAGTCAGAGTGCTCTGAACAAGCACACACGGACAGTTCACGTCGCTGCAGTGCCAGTGTTTGAGTGTGCGCTGTGTGGCCGAACCTGTTCTAGGAAGGAGTATTTGGAGGAGCACATCCGAACTCATACAGGGAGCAAACCTTACCGATGTACTGTGTGCGGGAAACGGTTCGTAGGTCGAACTGGCTTGAATCACCACAGTAAAGTCCATGAACCTCCCCGTAGAGACGCTGTGTGTGAAGTTTGCGGCAAAGCTTTCACCAGGAAAGCTCTGTGGACTCATATGAAAATGCATAACAAGCAGTATAAGTGCGAACCGTGCAACAAGTTCTTCGCAACGCCTGGAACGTTGAGAGCGCACACCGCCATGACACATATCGAGAGCAGACTCTTTTCCTGTGGTTCGTGTGGCAAGAAATTTGCTCTCAAGAATCACCTCAATCGACATCAACGCAACGTGCACAATCCGGACCGTAGCTTTCCATGTCGCACTTGCGATAAGGTCTTCAGCAGTGAATCTCTGCTTCGTTCTCACGAGCGCTCGAGCCACGTCGTTTCTCCACGTCGTCACGAGTGCAAGATGTGCGGCCGGATGTTCGCTGGTCGCAGCTCGCTCGTGTACCATCAGCGGACACACACCGGGGAGCGTCCCCACGCCTGCTCGATGTGTCCGAAAGCGTTCTTCCGTCCGGACGCCCTGGTCAAGCACGAGCGCGGCCATCGTCGCGAGAGACCGTACCAGTGTGTGGTGTGTCACCTACGTTGCTCCTCCAAGAGTGCCTTGAACAAGCACAACAAGCGTCATGATCATCAGCAAGTTGTGACTCCGCAGACTGCTGTCTTCAGCAGTGAATCTCTGCTTCGTTCTCACGAGCGCTCGAGCCACGTCGTTTCTCCACGTCGTCACGAGTGCAAGATGTGCGGACGGATGTTCGCTGGTCGCAGCTCGCTCGTCTACCACCAGCGGACACACACCGGGGAGCGTCCCCACGCCTGCTCGATGTGTCCGAAAGCGTTCTTCCGTCCTGATGCCCTGGTCAAGCACGAGCGCGGCCATCGTCGCGAGAGACCGTACCAGTGTGTGGTGTGTCACCTACGTTGCTCCTCCAAGAGTGCCTTGAACAAGCACAACAAGCGTCATGATCATCAGCAAGTTAATGTGACTCCGCAGACTGCTGTACTCGCACCGGAGCTcactcagcagcagcaggattTCATGGAGCTCATACCCCATGAAAATAACGCCTTCTGA
Protein Sequence: MTEIAMEEPYIICHQSYYEHLMGSLRRLESLMDTHLVLAGNELAAIHGFVLGALSSYVQTLPRAANQAATTYILLRELDPWSVRCLLEYFHSGALIVPKHSLPCMDRILQTLDVSLGSEFFESEDSVHFSLSQALKCTVIDTIWLNREHNYDVKIRTEGMHETFAHAAVLSACSEQLSTLFRAAQNSRPTLIVLLDFHLQDVECVLRFCYKGETEIPRERARAVLNLSPYFKPLFELSNWRHSLVFLSELSLDIVQAFVDYMYYGEVLFTGGLTEFATAVNGLIDFSMLPANNVEPQWSSIDQLPPPQLEPPPPPQMEPPPEVQQSEPSTETSQTNGTPLTYTCDICSETFYSRRSLKLHLKCHPESGNLQCQYCDQQFTKPSARRAHERTHTGAKSHVCQTCGKTYTSQSALNKHTRTVHVAAVPVFECALCGRTCSRKEYLEEHIRTHTGSKPYRCTVCGKRFVGRTGLNHHSKVHEPPRRDAVCEVCGKAFTRKALWTHMKMHNKQYKCEPCNKFFATPGTLRAHTAMTHIESRLFSCGSCGKKFALKNHLNRHQRNVHNPDRSFPCRTCDKVFSSESLLRSHERSSHVVSPRRHECKMCGRMFAGRSSLVYHQRTHTGERPHACSMCPKAFFRPDALVKHERGHRRERPYQCVVCHLRCSSKSALNKHNKRHDHQQVVTPQTAVFSSESLLRSHERSSHVVSPRRHECKMCGRMFAGRSSLVYHQRTHTGERPHACSMCPKAFFRPDALVKHERGHRRERPYQCVVCHLRCSSKSALNKHNKRHDHQQVNVTPQTAVLAPELTQQQQDFMELIPHENNAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00651044;
90% Identity: iTF_00651044;
80% Identity: iTF_00651044;