Edan004552.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- RCOR3
- Assembly
- GCA_000507165.2
- Location
- KZ497645.1:196798-212813[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 1.2e+03 -0.3 0.0 25 41 60 79 54 82 0.80 2 3 1.7e-07 0.00017 21.6 0.0 3 45 140 182 138 183 0.91 3 3 7.6e-13 7.5e-10 38.8 0.0 3 46 391 434 390 434 0.98
Sequence Information
- Coding Sequence
- ATGGTTCTAGCATCGGACAGAAACTCGGACAATATGAGAAATGGGAGAAGATCTGGGGGCCCAAGTCCAAATGGGCATGCCACCGAATCGAGCAGCGATGAAGAGAGTGGACCTCCTCCTGCACCAAATCCTCCTGTTCCAGAGGAGAAAATTCGAGTCGGGCGAGATTACCAGAGTTTAGTGCCTGCGCTTATTCCTAGTTCAGAGCGCCGTCCCGAAGAACAATGTGTGGAGAGAGCTCTACTAGTTTGGTCACCGTCACCCAACATTCCTGATGCAAAGCTTGATGAGTACATCACTTTAGCCAAAGAAAAATATGGCTACAATGGAGAGCAAGCTCTTGGGATGTTATTTTGGCACAAACATGACCTAGAAAGAGCCATTTTGGATCTTGCAAACTTCACCCCATTTCCTGATGAGTGGACAGTCGAGGACAAAGTGTTGTTCGAGCAGGCTTTTCAATTCCATGGCAAGAGCTTTCATCGCATACGCCAAATGCTTCCTGACAAGTCCATTCCATGCCTGGTCAAGTACTACTACTCGTGGAAGAAAACTCGCAGTCGGACCAGCTTAATGGATCGGCAGGCACGTCGCATGGCCGCTCATCGGGAGGACGGAAGTGAGGGAGGTTCGGAACTGGGATCCAACACAGACTCCGATTCTGACGAGAAAGTTGCCGGGAAATGGACAATCCACCGAGGCATCCGGCGTAAAAGTGGCTCACCTCCTCGTGCAAACCAGAGTGACGAGCAAAAGGAAGGTGAAATAGTGCGGACCAATTGTTCCAATTGTGGAGTCAATTGTACCATGACACACCCTACTGCAAAGGGTTCAATGTGCAGTACCTGCTTCGGCTATTTCAAGCGCACTGGTAATCTGCGGCCAACCACAGGACCTGTGAGGCGCGAAGGACGGCAGTTACCTCACTCTCTTCTCAGACACAAACGTAAACCTCCCAGAGGAATGTACATCAACCACGATGATTTAGTGGCCATGGCTACCGGACCTGCAGGTCAGGGCGAGAGCATGCTGAAAGCCATGGACCGGGAAATTGTGTCACTAAAACGATTGGtccaaaacaataaacaatCTATCAGTGCACTCAAACGTAAGACAGTGGAAGGTATCAGTGAGCTACGTCCTGCAGACACGACCAGTCGTATCAATGCTCGATGGACACATGACGAGCTGTTGTTAGCTGTGCAAGGCATTCGCAAATACGGCAAAGATTTCCGAGCAATTGCTGAGGTGATTGGCACAAAAACCGAAGCTCATTTACGTAGCTACTTTGTCAACTATCGACGTCGCTTCAATCTGGACACAGTGCTCAAAGAGTATGAGGCAGAGCATGGTCCAGTGCAAGAGGAGGAGGAAAagATGGAGGTGGATGGAGTGTCCTCAGGCAGTGAGGCTGGAACCCCTACCCCAGGTGGCACATCTCCTGTACCAAGACAAGCTCCAGCTCTCTTAGGCAAAAATACCATCACTGGCACAGCTGTTCCTGCAGGCAAATGA
- Protein Sequence
- MVLASDRNSDNMRNGRRSGGPSPNGHATESSSDEESGPPPAPNPPVPEEKIRVGRDYQSLVPALIPSSERRPEEQCVERALLVWSPSPNIPDAKLDEYITLAKEKYGYNGEQALGMLFWHKHDLERAILDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIPCLVKYYYSWKKTRSRTSLMDRQARRMAAHREDGSEGGSELGSNTDSDSDEKVAGKWTIHRGIRRKSGSPPRANQSDEQKEGEIVRTNCSNCGVNCTMTHPTAKGSMCSTCFGYFKRTGNLRPTTGPVRREGRQLPHSLLRHKRKPPRGMYINHDDLVAMATGPAGQGESMLKAMDREIVSLKRLVQNNKQSISALKRKTVEGISELRPADTTSRINARWTHDELLLAVQGIRKYGKDFRAIAEVIGTKTEAHLRSYFVNYRRRFNLDTVLKEYEAEHGPVQEEEEKMEVDGVSSGSEAGTPTPGGTSPVPRQAPALLGKNTITGTAVPAGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01347942;
- 90% Identity
- -
- 80% Identity
- -