Basic Information

Gene Symbol
ncor1
Assembly
GCA_000507165.2
Location
KZ499110.1:85106-175880[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-08 5.3e-05 23.2 0.0 4 43 542 581 540 584 0.96
2 3 3.7e-09 3.7e-06 27.0 0.0 4 45 873 927 872 928 0.94
3 3 3.7e-09 3.7e-06 27.0 0.0 4 45 1328 1382 1327 1383 0.94

Sequence Information

Coding Sequence
ATGGAAACAGTGCAACAATCGGTGGTGCATCTCGATTCTTCGCCGCACCCCGCAACGATGGCGGCCAACGCGTCGCAGCTCGCTTATGCTCAGCGTTCCACTGCCGCTCTTCACCGGACACCACAGTCCGAGTTGAGCGGCGGTTCGCCCTACAAGCTACAACAACAGCAGAAGCCGCCCCCGCCTGCCCCGTCGTCCCAAGGCTCGTCTCCTGCCCCCGCGGCGGCCCCCGCTGTGTCCCAGGCCCCCGCGACCCCAGCAGGTGCCCCTGTGGCGGCGAGTCCCCCTGCGCTACATGCGGTAGCGAGTGCGCGCTACCATCCCGCCCCGAGACAACAAGCCTACCTGCAGCAGTCGCCCTATGGAGCCACGTTGGCGTACAGAGAGAACCCGAACCCATACTCAGCGAGAGCAGGCTCCGCAGTCAATTCCGTTTCGCAGAACGAGCGTCTGCTGCAAGCTGACTACCCCGCGCCGGTGTCCACTGCTGGCCCTGGCCCCCCACCCCCCATGGGCAACAGACCTCACCGCATCTCGCTGCTGCCCTCAGTCCCCCAGCAAGAGTACCTGTCCTCTGCGGCCGCGACGGCAGTGCTCCCTCCCAGGCAGAGGCCACAGCCgGGCGAGCCGTACAGAGAAGTGTTGGCGACAGCGCCACACCAAATTGATCTGGTTTCTTCCCCGGCAATCAAGAAGATTCGTCTGGGAGCAGACACCAAGGTTCCTGTCTTGTTGGACCCTGCGGTGCAGCAGCCACTGAGAGTAGAGACCGGGGAGCCTGCATACAACCCTCAAGTGGAGGCCATTTCCCCGACGCTGCCACCTGAGAACCTGCAAGAGGACTCTGCATTCCGAGCCACCAAGGATGACTTGCTACAACAGATCGCCAAGGTGGACAGAGAGATCGCCAAGGCAGAGGCCCAGATCTCCAAACTTAAAAAGAAACAGCATGAGTTGGAGGAGGCAGCCAACAAGCCGGTGACTGTCAAGGAAGAGGTTGAGACTACGGCACAGCAGCCCAAGCATCAGAGCCTCGCCCAGAAGATCTACTCAGAGAACAGAAGAAAGGTGCAGCAGGCACATGAACTTTTGGAGAAGCTGGGACCCAAGGTGGATCTGCCGCTGTACAACCAGCCCTTGGACACAACAATCTACCACGAAAACAAGCGCAGGCATGAGGTGTTCCGACAACGCCTTGTTGAGCACCTGCGCCGACAGCACGCCGAGCGCCGGGATAGAGAGACATACCTGGCTGCAACATATGCACGCCAGCAAGCAGCCTGGGCCAAGAAGGTGGAGCGCCTTGAGAACACAACCAAGAGGCGCACACGCGACGCCAAGAACCGGGAGCTGTTTGAGAAGGTGTTCCCTGAGCTGAGGAAACAGAGGGAGGACAGAGAGAGGTTCAACAGGGTCGGCGCCAGGATCAAGAGTGAGGCAGACCTCGAGGAGATCATGGACGGACTGCAGGAGCAGGAGATGGAGGATAAGAAGATGCGCTCCTACGCTGTGGTTCCCCCGATCTTGCTGGACGCCAAACAGCGCCGCCTCACCTTCCTCAACAACAACGGCTTCATCGAGGACTTTCCCGCTGAGTACTTGGAGTCCACGCACATCAACCTGTGGACTGATCAGGAGAAGGAGATCTTCAAGGAGAAGTTCCTGCAGCATCCGAAGAATTTCGGTGCGATCGCTCAGTACCTGGAGCACAAGAGCATGGGCGATTGCGTGCGCTTCTACTACTTCACCAAGAAGACGCAGAACTATAGACAATTGCTGCGCAAGTCGAGACAGCGCACCCGCGGCACCCGCAACAACCCTGGCGGTGCCAAAGCTTCCGGAGGGTCTGGCGGCACGGTGGTGATGGGTTTTGACATCAGTACCGGGGTGACGACAAGGCAGTCGGTGGCGGCGTTGCAGCGCGAGCAGCAGCAGAAACAAGAGCAGCAGGCCGCCACTGCGCCCCCGGACCTCGACCTCCAGGGTGCCCCACCCCCGGTCACTGCCAAGGACGATAAGGATGGAGGAGATTCCTCCACCTCGCAGTCGCAGCAACAACCTCCCGCGCTGCCCTCCAAGCCAAGTGGAGGCGAGGCAGGTGCGACATCTGGCAGCGGCTCCAGTAATAAGAAAAAAGAACGCCGCAAGGAGGATAAAAAGAAGGATGATCTGGATAGCAGCGAGGAGGAGTGTGTCGAAGTCCAAGAGGGCGCCACTGTGATCGGTCCCCATACCTGCGCGGTATGCAAGACTAACCTGGAGAGCGGCGCACTGTCTCGCGCACTTCCCAGGTCGCACGCGGCGCAGTACGGACTGGGCGAGGACGAGGTGACACCTGGTGCACGTGTCTGTACCACGTGTCGCTGCAAAGCCGTGCGGTCCCGCTACGTGcaGTGTCCTATCCCGACCTGCCCCACCACAAAGGGGCGAGTAAAGCGACTGCGCCCTTTACCTGGCAAGTGGAATGAGCTTTCTGCTGAGATCCGGGACCCCATCGTTGCTGAATTCCAGATCCCCGCGAACGTGAGTAAGTGCTGCTCGGCGTGTCACAGTCGCATCTCGCGGCGCCTCAGTCCAGCCTCAGTTGACAGTGAAGACAGCGCGGCCGCAGCGGGGTGGCCGGAGGACGACGTGGAGAGACTTAGACGCGCGGTGCGGGAACATGGCACGCATTGGGCGCGGGTCGCGACCCATCTCAATAATGCTGCCACGCCGCCTACCGGTGTTTCCAACTTGACTCCGAGGACCCAGCATCAGTGTAAAGCCTTCTTCTATGCGCACAGAAAAAAGTTGGCACTTGACATCGCGCTCCAGGAATATCACAAGGCACACGCGGGCGAGGAGCGCAAGCCAACTGTGACTGATGAGGAAGAGTCTGGCTCGAGCACCTCCTCCTGTGACGAGGGTGTGGGGGGTGCACCCATGGATTCCAGCGACACAGCGAGTGCAGCTTCTCCTAGTGCGGCTACACCGGCCACCAATGCCACTACTGCGGCTCCTCCACCCACCACTCAACCCCCACCTAGACTTGACAAAGTAGATGAAGCAGTGGTGACACCGCCTGCACTGAGAGCACCAGAAATTGTGGCCACCACGAGAGACGAGTACGACAGCTCGGCCACGGAGACGGCAGACGAGGGCCAGGGAGGAGCAGATGGCGAATCCTCCCAACAAAGACCGTCGCCCTCCAAGACGGTTACTGCCTCTGTGGTCAATGGGAATGTGCCGGCCACCTCACCCTCTAGTGGCGAGCAGAGCACCAGAATCACGGTGAAGGACCTGATGTTGAACGTGATAGAGCGCACCCTCATGAAGCCTGTCAGCGGGGTGAGCCCCTCCATCTCACGCGCCACCTCTCTGCAGAGCTCAGTGCCGTGTGGCTCGCCCCAGACCCCCACCATCGACTCCATCCTCAAGACCGACCGACCACTGCCATTCCCATCCCGAGAGTACCGAGGCAGTCCAGTGTCAGCCACTCAGCCCCAACCACAGCAGCAGCCAGCACAGGGACCCCAGGAACTTCCCAAGGAAGGGCTTGTCGTCATGCAGGTACAACAACAGGCGCTACGAGAGAGCtcccaacagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcatcaccAAGAGGGGGTGACGCTGGACCTCAGCATACCCAGGAAGCGACCTCTCAGTCCTCCCCTGCACCATCGAGCCTCTCCCGCTTCCCCCTACCCTCCCAGCGCTCAGTCAGCCAAACCTGGCATCCAGCAGAGGCCGCTGCATCCACCTCCTGAGGTTGTGCAGGGTCCACCTCCTCCACTGACTCCAAAGCTGCTTAAGGGAGGCTCCATCACTCACGGCACCCCGGTGTCGGGCGGACCTCCTCAGTCCATCCAAGTACTCTCAGCTGTGCCCTCCGCCATGAGTCGCATCTCGCGGCGCCTCAGTCCAGCCTCAGTTGACAGTGAAGACAGCGCGGCCGCAGCGGGGTGGCCGGAGGACGACGTGGAGAGACTTAGACGCGCGGTGCGGGAACATGGCACGCATTGGGCGCGGGTCGCGACCCATCTCAATAATGCTGCCACGCCGCCTACCGGTGTTTCCAACTTGACTCCGAGGACCCAGCATCAGTGTAAAGCCTTCTTCTATGCGCACAGAAAAAAGTTGGCACTTGACATCGCGCTCCAGGAATATCACAAGGCACACGCGGGCGAGGAGCGCAAGCCAACTGTGACTGATGAGGAAGAGTCTGGCTCGAGCACCTCCTCCTGTGACGAGGGTGTGGGGGGTGCACCCATGGATTCCAGCGACACAGCGAGTGCAGCTTCTCCTAGTGCGGCTACACCGGCCACCAATGCCACTACTGCGGCTCCTCCACCCACCACTCAACCCCCACCTAGACTTGACAAAGTAGATGAAGCAGTGGTGACACCGCCTGCACTGAGAGCACCAGAAATTGTGGCCACCACGAGAGACGAGTACGACAGCTCGGCCACGACGGCAGACGAGGGCCAGGGAGGAGCAGATGGCGAATCCTCCCAACAAAGACCGTCGCCCTCCAAGACGGTTACTGCCTCTGTGGTCAATGGGAATGTGCCGGCCACCTCACCCTCTAGTGGCGAGCAGAGCACCAGAATCACGGTGAAGGACCTGATGTTGAACGTGATAGAGCGCACCCTCATGAAGCCTGTCAGCGGGGTGAGCCCCTCCATCTCACGCGCCACCTCTCTGCAGAGCTCAGTGCCGTGTGGCTCGCCCCAGACCCCCACCATCGACTCCATCCTCAAGACCGACCGACCACTGCCATTCCCATCCCGAGAGTACCGAGGCAGTCCAGTGTCAGCCACTCAGCCCCAACCACAGCAGCAGCCAGCACAGGGACCCCAGGAACTTCCCAAGGAAGGGCTTGTCGTCATGCAGGTGCAGCAGGTACAACAACAGGCGCTACGAGAGAGCtcccaacagcagcagcagcaacaacagcagcagcagcagcagcagcagcagcatcaccAAGAGGGGGTGACGCTGGACCTCAGCATACCCAGGAAGCGACCTCTCAGTCCTCCCCTGCACCATCGAGCCTCTCCCGCTTCCCCCTACCCTCCCAGCGCTCAGTCAGCCAAACCTGGCATCCAGCAGAGGCCGCTGCATCCACCTCCTGAGGTTGTGGTGTATCGTGAGGCTCCCCAGCAGTACTACCAcacccagcagcagcaggacgGAGGCAGGGGGAAGTCACCGTCGATGTATGTGCAGGACTCCAGAGCGCCTCACCTCATGATGAACAGAGCAGCCTCAGTCACTTTGGCACCTCCAGGTCAACAACCTCAGCAGCAGATGAAGTTGCAGCATGCGCAGGGTCCACCTCCTCCACTGACTCCAAAGCTGCTTAAGGGAGGCTCCATCACTCACGGCACCCCGGTGTCGGGCGGACCTCCTCAGTCCATCCAAGTACTCTCAGCTGTGCCCTCCGCCATGAGAGTGGATGGCCTTCTGCGCGGCCAACCCAAGGAAAGTGGCGGCTCCATCACCCAGGGGACCTCGTTGCAACAACATCACGACAAGCAGCAGCAACGACCTGGCAGTGCCACCGCCAATGTTTACGAGCGCCACGAACTGTACAAGCGCGGATCACCTCCAGGTCACATAACTCACGTGGCATACCCCAGCGCTGGCCCACCACCTCCTCCCCCTGGCTCCACCCAGTACCGGACCGCCAACTACGCCATGGAGCAGCAACTAAGCTCGAGACAGATCATCATGAACGACTACATCACGTCGCAGCAAATGGTTGGGAGACGTGGTTCAGCAGACAAGGAGAGACTGAGCCCTCGCGGCGCCTCCTCTGCCTCCCCCCACCACCTCTACTACCCTCCCCCTTCATCCACGGCCAATCAGATGTACCCAGCTGGGTCTCCTCAACGCACCCCTCCCCCACCACAACAAAGACAAGGTGTGATCCAACGAAACACGCTGCGACCTCAGCCTGCCCCTCAGGCCAAACCCATGCTCATCACCACCCAGAAATCATCTCCACCTCCCCAGCAGCAACAGAGACACTCGGCGTACCCTCCAGGTCACGAGGCTTTCTCCTCACTGGTGGATGTGGCGTCGCAGCAACCCAGTCTGCCAGTGCCCAAGGTACATCGCAATGAGTCAGCGTCCTCCAACGCTCCTCCATTGCTACACGAGGGCCTGGGAAAAGGTTTGGTCGACGCCCACCTTCTGACCACACAACAACAACTCAAACTGAGCGACGAGGCCATCATGGACGGGCTGAGACGAGGTTACGTCAACTTCCAGACATACAACGACTTCCTCAAGATGAAAGAGCACCAGGGCCAGCGCTACAAGGAGCTGCAACAACACGAACAACAACATTTCCAGCGTCAACAGCAACAATTgcaccaacagcagcagcaacaacaacaacagcagcaacagcaacaacaaagaGAGCAACATTTGCAGAGGGAGAGACAGCAGCATGAAATCCGGCAGCAGCAGGTGCAACAGGAGAGGAGACAGGCTGAGATGGAGCGCATCGACCGTGCCAGGTTCATGCACGCCCAACAGCAGGCGCAGCAGCAGGCCCAGCAAGCTCAGCAGGCGCAGCAGCAGAACAAAGAGAGGGAAGCTGCTCGTCTGCTAGCTACCTCCAGCTACCACATACCTCAGCGTGGCCCGGCACCTCTCCGACAAGCCCCTCCAGCGCCAccccagcaacagcagcagccagCGCCAAGGCCAGCACAAGCACCCGCTCCTCCCCCACCCACCACCCAAGCAGGTGATTCCTCCACCATGACGGCAGCGAGTCTGATCCACGCCATCATCACACATCAGATCAACCAGAGCAGTGAGAACGAGCAGCAGCCGGCACAGCCCAGACCTGGAGACACCCTTTTCCAGAGCTTCCAGCGTGAGGCCCCCAACAACTCAGGAGgccagcagcaacaacagcaacagcCACCCCAAGGTTCTCAGACAGCCTCTCACCCTGGCAGCAGCGAGTGTCGCGCCGGCTCCCCACGGAAACCTGCCCCACACCCCGCAGATGAGGAGAAGCCTGTGATCACCCTCGGCGAGCACATAGACTCCATCATCACTAAGGATTTGGCAGCACCCAGTTTCCGATACGAGCAGTCACCATCCCAACAGCCGGAACACTGGAAAATGAGACGTAAGGAAGAAGCTAAGGATAAGTCACTAGCGCCCAATGAGAGACAGATCATCAGGATAGCGCAGCCTACGTCACCTCGACCTCCGTATCATGTGGAACCTGTGTCTCCCCCTGAACAGCCAGCCCCCGCCCCTGAATCTGCCTCTGCTCAACACTGGCACCCCAGTATGTACATCCAGCGACAGTTCCACCCCAATGAGAGACAGGCGCAGGAGCGAGGCAAACCTCACTTGTCCCCTCTGGATTACGTGAAGAACCGGATAGTGGAGGTGATGCGCACCTCAGAGGAAGACCATAAGGACTACAAGAGACCAGCTGAGGAAGATGGGGAGGGTGAGGGCAAACGCTTCAAGTCGGGAGACTGTGAGGAAAAGAGAGACGAGGGGGGAGAGAAGGAGGTGTCGGCAGACTCTCCCCAGTCCACCGACATGGTGATTGATGAAGACAGTAAAGTCGAGCCGGTGTCTCCGGCAACCTCAACCGGACAATACTACCCCAACAAGCCTGCAGACTACTACCCACCCACCACCTATGCTTACCCCTACTCCGCCCTAAGCGTGAGACCCATCTCCACAAGTGCATCCCCCCAGCCCCCTGCCACTTCCTCTGTGACCTCGGTAAGCTCACCGTCGCCTCAGCCTCGACAGGCGCCGCAGAACCCGTCCAGTGCACCTCCAGAGCCGAGCGGCGCGCCGCAGCAGAATgcccaacagcagcagcagcaacaacaacccCCCAGTGCGCCGCCTAGACCCCCCGAACCAGCGCCGCTTCTGTCGGCCCAGTACGAACCGTTGTCTGATCCAGAGTGA
Protein Sequence
METVQQSVVHLDSSPHPATMAANASQLAYAQRSTAALHRTPQSELSGGSPYKLQQQQKPPPPAPSSQGSSPAPAAAPAVSQAPATPAGAPVAASPPALHAVASARYHPAPRQQAYLQQSPYGATLAYRENPNPYSARAGSAVNSVSQNERLLQADYPAPVSTAGPGPPPPMGNRPHRISLLPSVPQQEYLSSAAATAVLPPRQRPQPGEPYREVLATAPHQIDLVSSPAIKKIRLGADTKVPVLLDPAVQQPLRVETGEPAYNPQVEAISPTLPPENLQEDSAFRATKDDLLQQIAKVDREIAKAEAQISKLKKKQHELEEAANKPVTVKEEVETTAQQPKHQSLAQKIYSENRRKVQQAHELLEKLGPKVDLPLYNQPLDTTIYHENKRRHEVFRQRLVEHLRRQHAERRDRETYLAATYARQQAAWAKKVERLENTTKRRTRDAKNRELFEKVFPELRKQREDRERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVVPPILLDAKQRRLTFLNNNGFIEDFPAEYLESTHINLWTDQEKEIFKEKFLQHPKNFGAIAQYLEHKSMGDCVRFYYFTKKTQNYRQLLRKSRQRTRGTRNNPGGAKASGGSGGTVVMGFDISTGVTTRQSVAALQREQQQKQEQQAATAPPDLDLQGAPPPVTAKDDKDGGDSSTSQSQQQPPALPSKPSGGEAGATSGSGSSNKKKERRKEDKKKDDLDSSEEECVEVQEGATVIGPHTCAVCKTNLESGALSRALPRSHAAQYGLGEDEVTPGARVCTTCRCKAVRSRYVQCPIPTCPTTKGRVKRLRPLPGKWNELSAEIRDPIVAEFQIPANVSKCCSACHSRISRRLSPASVDSEDSAAAAGWPEDDVERLRRAVREHGTHWARVATHLNNAATPPTGVSNLTPRTQHQCKAFFYAHRKKLALDIALQEYHKAHAGEERKPTVTDEEESGSSTSSCDEGVGGAPMDSSDTASAASPSAATPATNATTAAPPPTTQPPPRLDKVDEAVVTPPALRAPEIVATTRDEYDSSATETADEGQGGADGESSQQRPSPSKTVTASVVNGNVPATSPSSGEQSTRITVKDLMLNVIERTLMKPVSGVSPSISRATSLQSSVPCGSPQTPTIDSILKTDRPLPFPSREYRGSPVSATQPQPQQQPAQGPQELPKEGLVVMQVQQQALRESSQQQQQQQQQQQQQQQQHHQEGVTLDLSIPRKRPLSPPLHHRASPASPYPPSAQSAKPGIQQRPLHPPPEVVQGPPPPLTPKLLKGGSITHGTPVSGGPPQSIQVLSAVPSAMSRISRRLSPASVDSEDSAAAAGWPEDDVERLRRAVREHGTHWARVATHLNNAATPPTGVSNLTPRTQHQCKAFFYAHRKKLALDIALQEYHKAHAGEERKPTVTDEEESGSSTSSCDEGVGGAPMDSSDTASAASPSAATPATNATTAAPPPTTQPPPRLDKVDEAVVTPPALRAPEIVATTRDEYDSSATTADEGQGGADGESSQQRPSPSKTVTASVVNGNVPATSPSSGEQSTRITVKDLMLNVIERTLMKPVSGVSPSISRATSLQSSVPCGSPQTPTIDSILKTDRPLPFPSREYRGSPVSATQPQPQQQPAQGPQELPKEGLVVMQVQQVQQQALRESSQQQQQQQQQQQQQQQQHHQEGVTLDLSIPRKRPLSPPLHHRASPASPYPPSAQSAKPGIQQRPLHPPPEVVVYREAPQQYYHTQQQQDGGRGKSPSMYVQDSRAPHLMMNRAASVTLAPPGQQPQQQMKLQHAQGPPPPLTPKLLKGGSITHGTPVSGGPPQSIQVLSAVPSAMRVDGLLRGQPKESGGSITQGTSLQQHHDKQQQRPGSATANVYERHELYKRGSPPGHITHVAYPSAGPPPPPPGSTQYRTANYAMEQQLSSRQIIMNDYITSQQMVGRRGSADKERLSPRGASSASPHHLYYPPPSSTANQMYPAGSPQRTPPPPQQRQGVIQRNTLRPQPAPQAKPMLITTQKSSPPPQQQQRHSAYPPGHEAFSSLVDVASQQPSLPVPKVHRNESASSNAPPLLHEGLGKGLVDAHLLTTQQQLKLSDEAIMDGLRRGYVNFQTYNDFLKMKEHQGQRYKELQQHEQQHFQRQQQQLHQQQQQQQQQQQQQQQREQHLQRERQQHEIRQQQVQQERRQAEMERIDRARFMHAQQQAQQQAQQAQQAQQQNKEREAARLLATSSYHIPQRGPAPLRQAPPAPPQQQQQPAPRPAQAPAPPPPTTQAGDSSTMTAASLIHAIITHQINQSSENEQQPAQPRPGDTLFQSFQREAPNNSGGQQQQQQQPPQGSQTASHPGSSECRAGSPRKPAPHPADEEKPVITLGEHIDSIITKDLAAPSFRYEQSPSQQPEHWKMRRKEEAKDKSLAPNERQIIRIAQPTSPRPPYHVEPVSPPEQPAPAPESASAQHWHPSMYIQRQFHPNERQAQERGKPHLSPLDYVKNRIVEVMRTSEEDHKDYKRPAEEDGEGEGKRFKSGDCEEKRDEGGEKEVSADSPQSTDMVIDEDSKVEPVSPATSTGQYYPNKPADYYPPTTYAYPYSALSVRPISTSASPQPPATSSVTSVSSPSPQPRQAPQNPSSAPPEPSGAPQQNAQQQQQQQQPPSAPPRPPEPAPLLSAQYEPLSDPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-