Edan005121.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- ttk
- Assembly
- GCA_000507165.2
- Location
- KZ497616.1:716409-731036[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-16 3.3e-13 49.1 0.0 2 42 397 438 396 441 0.94
Sequence Information
- Coding Sequence
- ATGTCTGTAGCTCAGCAGTTCTGCTTAAGGTGGAACAATCACCAGCCCAACTTTGTAACAGTTTTTAGCAACCTTCTCAACAACCAAGCATTGACAGACGTTACTTTAGCAGCTGAAGGTCAGCATTTGGAAGCTCATAGAGTTGTACTGTCTGCTTGCAGCACTTATTTTCAGTCCCTTTTCACAACCAGTAAAAGTCATCTTCATCCCATTGTCATCCTCAAAGATGTCCAATTCCGAGACCTGCGTACTATGGTCGATTTCATGTATTCTGGCGAAGTTCATGTATCTCAGGAACAACTCCCTTCCATCCTTAAGaCAGCTGAGACATTGAAGATCAAAGGTTTGGCAGAGGTTCAAGATCCATCACTGTTCAGTAAATCTCagGAAAAACAGCTGTCGACGGAATCTCGTTTATCATGCGAGGTTATGGGAATGTCTGTTGAGTCGGGCCCGTGGTGTTCCGAGCACCGTAGTCCATCTCCTGGTACATCACCTACTGCTGCCCAGCGCCGAAAACGCATGCGCAAAGCCTCTACCGGCTCCACGTCAGAGTCTACAGTGACAGAGCGTACATCAGAGGAGGTAGCAACCGAAGTCAGCTTCAACCAGTCACCGTCTCGACTTGAGCAACAGAGCTCATCCCAACTCACCATGTCTGCCGATATGTCAGAACGTAGTGGCAGTTTGCGCGAACAGACGAGCACAGATTCAGATATCCAGAATTGCTCTCAAGATAGTGGAGAACGAATTCCACTAGCAATGCAAGGATCTGAGAGTGTTCGGCAAGAGGTGCAACAACagcatcaacaacaacaacagcagcaacaacagggGGTTCCACCACAACCTCGTAGTGTGGAGGAAGTGTCTGTGCCAAGTCCACAGTTGGAGTCCACTCCTCATCACTACCCAGCAACTCTCACTCCAGGATTTCAATGGGATCACGGCAGCTGTTATTATACCAGATATCCCCATCCGTCGTGTTCCTTCATCAACACAGGCCCTCCCCCAATGCCCGATACCATTGCGATTCGTCACACAGCCCCACCTTTCTCTCCACACAAGCGTTCCTCTCCTGGTAGCCTACCTGGTCCAGCCCCAAGCCCAAATCCATCTCCATCTCCGTGTCCATCGTCACCACCAAGCTCGCCAACCGTGAGGAGGAAGCGCACGGACACCCAACgtgatgaaaattttttacaagCTCTGGAAGCAGTAAGGTCTGGTGGTATTGGTTTTTGTAAGGCAGCGAGAATGTACGGAGTTAACAATCGAACTCTTTGGCTGGAATATCGTAGAAGAGGTTACCCCATCACTCGACCTAGTCTCAAACCGAGAGCATCGACTCCTCAAATGTCGCCATATCCAACTTACCCTGCTGTTGTGATGAAGAAAGAACCGATGGACTCCAGTTGTAGTAATGATGATTCTACAGTTGCTTCACAGGAGAACACTGGGAATCCATCACAACCTGTAACTCCTAGCTATCAGGATTCTAACAATCCCGAAATCATGTTTCTGCAAAGTAGTGATATTTTCTGA
- Protein Sequence
- MSVAQQFCLRWNNHQPNFVTVFSNLLNNQALTDVTLAAEGQHLEAHRVVLSACSTYFQSLFTTSKSHLHPIVILKDVQFRDLRTMVDFMYSGEVHVSQEQLPSILKTAETLKIKGLAEVQDPSLFSKSQEKQLSTESRLSCEVMGMSVESGPWCSEHRSPSPGTSPTAAQRRKRMRKASTGSTSESTVTERTSEEVATEVSFNQSPSRLEQQSSSQLTMSADMSERSGSLREQTSTDSDIQNCSQDSGERIPLAMQGSESVRQEVQQQHQQQQQQQQQGVPPQPRSVEEVSVPSPQLESTPHHYPATLTPGFQWDHGSCYYTRYPHPSCSFINTGPPPMPDTIAIRHTAPPFSPHKRSSPGSLPGPAPSPNPSPSPCPSSPPSSPTVRRKRTDTQRDENFLQALEAVRSGGIGFCKAARMYGVNNRTLWLEYRRRGYPITRPSLKPRASTPQMSPYPTYPAVVMKKEPMDSSCSNDDSTVASQENTGNPSQPVTPSYQDSNNPEIMFLQSSDIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651036;
- 90% Identity
- iTF_00651036;
- 80% Identity
- iTF_00651036;