Edan003817.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- lov
- Assembly
- GCA_000507165.2
- Location
- KZ497916.1:643045-650994[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.33 4.6e+02 0.6 0.0 13 23 140 154 136 155 0.74 2 2 1.4e-18 1.9e-15 56.3 0.0 1 44 389 432 389 433 0.96
Sequence Information
- Coding Sequence
- ATGACAGTTTTCGTCGTGTACGATCCCGATGCCGACCACGTCACGGCAACAGTGTGCACACCTATGCTGGACTGGGGTGGTTGCGCAGGCGGCGTTGCCAGGCGGCCTTTAGGTCCTAGCAACAGATTGGCATTTAGTAACAGCACCGTGCGTGGCAGCATGACAAGCTCGGAGGGCGCTGGCTACAGCCTGCGCTGGAACAACCATCAACATCACATTCTGCACGCCTTCGAGTCCTTGCTGCAGGACGAGGCGCTCGTGGACGTGACACTTGTCTGTGAGGACGGACGTGTTCGAGCGCACAAAGTCGTTCTCTCTGCCTGCAGCCCGTACTTTCAGCGAATTTTCTCGGAGACTCCGTGCAAGCACCCAGTGATCGTACTCAAGGACTTGCGAGGCTGGGAAGTGCAGTCCATTGTGGACTTCATGTACAAGGGCGAGATCAGCGTGAGTCAGGCGCAACTCTCCTCACTCATCCGCGCCGCAGAATCGCTCCAGGTTCGCGGACTGGCCCATATGGAGAAGGAGCAGATGCATACAAGCTCATCTACCGGTGCTGCGACCTTGACCCCAGCCCGAGGATGTCGCTTGGAACCCCCAGGTTCACCACCTGTGGTATCATCAGCCCCTCTATCCTCGACACGCCCCTACTCTCCCGTCCCAATGTCAGGTCTATACCCTCGCGTAGGCACGGAGAACGGTCCTCTGTTGCTCTCGTCACCATTCTCCCCCTCCCCGGCGCCACATTTTGAGCCCTCACCCATAAAGTCGCATCGACAAGAGGCCACCGGAAGTCCGTCAGGTCACTGTAGTCGCGATCCACACCGAGCATCGCCGTTACCGCGGAGGAAACAAGCGAGACCACGCAGGAGGTCCGGTGAATTGAGTGCGCACGATCTGTCCAAGAGTTCGGCAGCCTCGTCACCGGCCTCGTCCCCCTCAGATGTGCCTGAGAATCTTTGTGTCAAGAAGGCTGCGTCACATCAACCTGGTTCGCCGCCGTTGCATGGTCACACCGTCGTCCCCCACTCACCGGATCCGCCACTGGATGGCTCGGGGTTTCCGTTGCTGCCTTCCGTGTCCGCGCTCTCCCTTACTCCCCCACACATGGGACGACCGAAAGGACAACACAGCGCGCCTAGAGGTGGTCCTCCACGCTCTTGGACCAACGCCGAACTAACAGAGGCATTACAGCACGTATGGAATAAGAAAATGACCACGTCCCAAGCATCTAGAATATTCGGCATTCCGTACAACAGTTTACTGATGTACGTTCGCGGCAAGTATGGCAAGTCCCTGAAACTTGAACAACTGAAGAAAGACTGCTTGGTGGGTGCTGAAATGTTATCAGCGCCCAACTCTGCAGCATCTCAACCTCCAGGAGAAAGAAATAGTAGTGGTGGG
- Protein Sequence
- MTVFVVYDPDADHVTATVCTPMLDWGGCAGGVARRPLGPSNRLAFSNSTVRGSMTSSEGAGYSLRWNNHQHHILHAFESLLQDEALVDVTLVCEDGRVRAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLRGWEVQSIVDFMYKGEISVSQAQLSSLIRAAESLQVRGLAHMEKEQMHTSSSTGAATLTPARGCRLEPPGSPPVVSSAPLSSTRPYSPVPMSGLYPRVGTENGPLLLSSPFSPSPAPHFEPSPIKSHRQEATGSPSGHCSRDPHRASPLPRRKQARPRRRSGELSAHDLSKSSAASSPASSPSDVPENLCVKKAASHQPGSPPLHGHTVVPHSPDPPLDGSGFPLLPSVSALSLTPPHMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKDCLVGAEMLSAPNSAASQPPGERNSSGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651039;
- 90% Identity
- iTF_00651039;
- 80% Identity
- iTF_00651039;