Edan000583.1
Basic Information
- Insect
- Ephemera danica
- Gene Symbol
- -
- Assembly
- GCA_000507165.2
- Location
- KZ500065.1:184-6136[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-08 5.9e-05 22.7 0.0 5 35 209 239 208 248 0.87 2 4 1.5e-05 0.021 14.5 0.0 5 36 617 648 616 655 0.85 3 4 9.3e-11 1.3e-07 31.2 0.0 4 34 816 846 815 855 0.91 4 4 5e-10 6.9e-07 28.9 0.1 4 36 1222 1255 1219 1259 0.91
Sequence Information
- Coding Sequence
- ATGGCGAGCACGAACCAATCCACCACCACAGCAGATGTCTTTTCCCATTCCTCATCAAGAGATGAAGCAGGCTGCAGCAGAACAAGCACTGACCCATCATGCATCGACTTAGATATCGAGAAAGCATTAGTGATTCTTTTGAATGAAGCCAACGCCAGTGGGTTTGGGTTCCAACTTAGCCATTTGAAAGACATTTTTGGGCTGATTTATGGTGCTGAGAACATCAAGAGTCGCTTTAAAAATGACAGACCTGACAAAGATTGGTGCGACAGCTTCTTCGACCGCTACAAGGATTCACTAAAGCTACAGAAAGATGATCAACCTGAAGATAAACCTGAAACTGAGAAAGCCATTGCCCATTGGTTTGACAAATTACAGGAGTTCCTTCAGGAGCATGGAGTTTTTACTTTACTTCGGGATCCACATATTTGGCAAACTTATCATGCATCAGCAAAAAACAGCATAGTTATGAAAGGAAATGAGTTCGTGATACTTGACACCATTCGTCTTCAAACGCCACAAACAAACTGTAAGCGGCCAAATGTATCGGACGTGGAGAACCAGCAAGATGAGGGCGAAAATGCAAGTCATAAGAAGAAAAGACGTCTCTACGAGTCATCACATTTGCACCAAGCCATAGATTGTGTGATTAATGGGGGCGCTAGTATTCAATCAGCTGCAAAAAGATTTCACATCCCAAAATCCACACTAGCTGACAAACTGAGTGGAAAAAGTGAATTGGACACAAAGCCAGGTCCCAAACCTTATTTAAACCCTTTCATCGAACAAATCCTTATCATTCTTTGGAGAGACAGTCAACAGAGAGGCTTGTTGTTTGGAACACATCAACTTCAAACACTCTGCCAGCAAATAATTCAAGAGAAAAATCTgaaatcacaatttaaaaatggatgGCCCTGTAAAACATGGTGTGCATCATTTTTCAAGAGAAATCCTGATTTAGCTTGGAAACTAGTAGGTTCCAACAAGGGTAGCAAAACAGCTGAGGTGAAGAATAAAACTGAAAAGTGGTTTGAAAAGTTGCAGGAATTTCTGAAGAACCATGATTTGCAAATTTTCCTGAATAACCTAACAATGTGGCAAAATTACTGTGAGGAATCATGCCCAATGGAATTTTCAACAGATCCTGAAGGACCAGCTGAACAAACCCATGATCCAGGAGCTAGTACGTCCCAAGTTCTCCAGGCTTCAATCCAGTGTTACAAGAGAACCTCATTGTACAGAGATCAAGAACCTGATGTACATTCCATAGCAAATCTTGAAATGGGACTCGTTCTACTTGTCAAGGATATTATGCGTCGAAACCTCACTCTCACTGTCAACCAGTTTCAAGAGTTGTCTAAGCTTTTAGTCAAGGCTGAAAACTTACAAAACTTTTTCCATGGTGGCAAGCCAAGTAGAAGCTGGTGTCGTAGTTTTCTCAAacgtcataaaaatttgaacctTGAAAATTCTTTGCATGGTCATTCTGAAGGAGCACAAGAAGAAGTTACTAACTGGTTCAATGACCTTACAAAGTTCCTGCAAGAAAACAATCTACACTGTCTAATCACAGAACCTCATATTTGGAACCAAAGTGAAACGAACAATCCTGATAACATGGATGTTGACATCGCAGACATTTTGGATATTTCAATTCATGAATTACCTGATAACTCTGAGGCTGCAAACCTTCCAGTATCAAGACTGAAAAGTGTTAGAAAGAAAGGGATGAGAAAACAGAAACTGATTGTAAATATTCCACCACAATCCCCTCCACCTACCGCAGATCAACAAAAAGTACCTGCGGAGGGACCCAAGAAACGACTCCAATATTCTTCTTTAAAATTACGTGAAGCAATGCGCTGTGTTAGAGAAAAAGGAATGAAGCCTGCTACGGCAGCAAAAAGATTCAACGTTCCTCGCTCCACCCTAAAAGATAAACTCAATGGCAGATTTAAACTGGACAAAAAACCAGGCCCAGAACCTGTTATGTTGGCTGAAGTGGAAAAGGCACtggtaatttttatgaatgatggTCTACAAAGGGGTTTCACACTCAGAGTATTTCACCTGCAAAAGATTTTCGTGTATATCTCAGAATTCCGAGGCATTCCTTGCTTGTTCAAACATGGTAAACCTGGCCAAGGTTGGTGCCGTAATTTCTTCAAGCGATACCCAAATTTGACACAGAAACCACCAGAGTTACAAAAACAAGACACATCTGCAGTTCCATCAGAAGAGGACATCAAACGCTGGTTCCAAAATTTGAAACAGTTTTTGCATGAAAACGAGCTAGAAAAGTTTATTAACAACCCTGAGGTCTGGCAGAACTATTGTGACACCAATCACCCTGACATAACTTCAGCAGATCCTGTAAATCCTGAGAGGAAACCAAGATACACCGCAGGAACAAAGGAAGTGAGGAAGAAGTACTTGTTGTCCAATCTCCAGGCGGCAGTGCAGAGTGTACAGAAGGGAGAAATGAACCAGTCAACTGCAGCAAAAGTGTTCAACGTGCCTCGTTCCACCTTGACTGACAAGCTAAGTGGAAAGTCCAAATTAGACTCTAAACCCGGCCCTCCCCCTTTACTCGATTCCAATGTAGAAAAAGCTCTGGTCATTCTTCTAAAAGATGGTATGAAAAAAGGCTTTACATTTAAGTTGTCCCAAGTTCAAGAGATGGTTAAACATATACTTGACACATGCAAAATTGAAAGtcgatttaaaaacaataagCCAGGGAGGAGATGGAATGAGTTGTTCTTCAATCGTCACCCAGAATTGTCACTTGATACATCTGAACAGCAGGGGGATGACACTTCGACTGCTGCTCCAACAAAGGAGAGCATGGAAAACTGGAtgaggaattttaaaaattacttccAAAAAAATAGTCTCCAGTCTCTCATTGATAATCCTGATTCATTAAATGCCTACAACAGTGCCGATTGTGTTGGAATGGAATCATTGGACAATGAAATACTTCAACTCATTGAGTTTTCAAACGTAGAAGTGGCTGACTTAGATACTTTTTCTGTACCTCCAATACAGACACATGAAGAAGTGGAAGTAGATCCCAATGCATCAACAGACATGCAGAATgacgttgaaaatattttacaagaagAAATGGAGGAGCCTATAAATAGAGAACTTGAATGGAGCCAACCCCTGTCCGATGATGTTAAATCAGATAAGAAACCAGGTCGAGTACCATTCTTTGATTCTCGAATTGAGAATGCACTTGTACTTTTCATGAGAGACGGCATGACTCGAGACCTCATATTCAAACTGAGCAATTTGCAAGACATGGTGAAATCTATTCTTGAAAGTGAGAAAATCTTATCCCCCTTCAAAGAGAGCAAACCAGGAAGAAAATGGTGCCAAGCTTTTTTAAACCGTCATCCTGATTTGACTGTTGAACATGTTGAGCCACAAGCTGAAGGACTAACTACTGTACCAAGAGCAGCTATTTCAAGTTGGTTTAAAGCACTAACCAAATTTTTACGATATAATAGATTGCAAACTTTGACTGATGTTCCAGGTATTTGGTGCTCTTTTATTAATACCCACTGCCCTGAAATTGTGTCATTGAAAGAAACATTGAGTAAGAAACCCGTGACTAATGTAAGAAAGAAGAGATTTCAGTACACTTCCTCAAATATTCAGGAGGCAATGCAGAAAGTTTTAAGTGGAGAAATGAGTCACTCTGCTGCAGCAAAAGCATTCAATGTGCCTCGTTCCACTCTAACAGACAAGGTACATGGGAGGTCAGCAATAGACAAGAAGCCAGGCCCCAATCCTCACCTCAATCCAGATATAGAAAAGGCCCTTGTTATTCTGCTGAAAGATGGTATGCGCAGAGGTTGTAGATTCCAACTGAGACATGTGCAAGACATTTTGAAGCAAGTGCTCGATGCAAGTAACATACAAAGTCCTTTCAAAAATGCTGGTATGCCAGGCAAATCTTggtatgaattatttttcaagcgGCATCCAGAATTGAAACAAGAGAAATCAGAACATTCCCCTCGACATTATACACGTGAAAATATAGCTGTGAATGAAGCAAATGTGAAACAGTGGTTTACTAATTTAACTATGTTTTTGCAACAGCATGGGTTTCAAGCAATCTTTAGTGATACAGAGCAGTGGGCATAG
- Protein Sequence
- MASTNQSTTTADVFSHSSSRDEAGCSRTSTDPSCIDLDIEKALVILLNEANASGFGFQLSHLKDIFGLIYGAENIKSRFKNDRPDKDWCDSFFDRYKDSLKLQKDDQPEDKPETEKAIAHWFDKLQEFLQEHGVFTLLRDPHIWQTYHASAKNSIVMKGNEFVILDTIRLQTPQTNCKRPNVSDVENQQDEGENASHKKKRRLYESSHLHQAIDCVINGGASIQSAAKRFHIPKSTLADKLSGKSELDTKPGPKPYLNPFIEQILIILWRDSQQRGLLFGTHQLQTLCQQIIQEKNLKSQFKNGWPCKTWCASFFKRNPDLAWKLVGSNKGSKTAEVKNKTEKWFEKLQEFLKNHDLQIFLNNLTMWQNYCEESCPMEFSTDPEGPAEQTHDPGASTSQVLQASIQCYKRTSLYRDQEPDVHSIANLEMGLVLLVKDIMRRNLTLTVNQFQELSKLLVKAENLQNFFHGGKPSRSWCRSFLKRHKNLNLENSLHGHSEGAQEEVTNWFNDLTKFLQENNLHCLITEPHIWNQSETNNPDNMDVDIADILDISIHELPDNSEAANLPVSRLKSVRKKGMRKQKLIVNIPPQSPPPTADQQKVPAEGPKKRLQYSSLKLREAMRCVREKGMKPATAAKRFNVPRSTLKDKLNGRFKLDKKPGPEPVMLAEVEKALVIFMNDGLQRGFTLRVFHLQKIFVYISEFRGIPCLFKHGKPGQGWCRNFFKRYPNLTQKPPELQKQDTSAVPSEEDIKRWFQNLKQFLHENELEKFINNPEVWQNYCDTNHPDITSADPVNPERKPRYTAGTKEVRKKYLLSNLQAAVQSVQKGEMNQSTAAKVFNVPRSTLTDKLSGKSKLDSKPGPPPLLDSNVEKALVILLKDGMKKGFTFKLSQVQEMVKHILDTCKIESRFKNNKPGRRWNELFFNRHPELSLDTSEQQGDDTSTAAPTKESMENWMRNFKNYFQKNSLQSLIDNPDSLNAYNSADCVGMESLDNEILQLIEFSNVEVADLDTFSVPPIQTHEEVEVDPNASTDMQNDVENILQEEMEEPINRELEWSQPLSDDVKSDKKPGRVPFFDSRIENALVLFMRDGMTRDLIFKLSNLQDMVKSILESEKILSPFKESKPGRKWCQAFLNRHPDLTVEHVEPQAEGLTTVPRAAISSWFKALTKFLRYNRLQTLTDVPGIWCSFINTHCPEIVSLKETLSKKPVTNVRKKRFQYTSSNIQEAMQKVLSGEMSHSAAAKAFNVPRSTLTDKVHGRSAIDKKPGPNPHLNPDIEKALVILLKDGMRRGCRFQLRHVQDILKQVLDASNIQSPFKNAGMPGKSWYELFFKRHPELKQEKSEHSPRHYTRENIAVNEANVKQWFTNLTMFLQQHGFQAIFSDTEQWA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -