Efus023081.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992053.1:4754549-4770015[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 1.6 1.5e+02 3.8 4.0 1 21 302 322 302 326 0.89 2 10 0.0012 0.11 13.7 2.1 1 23 332 354 332 354 0.99 3 10 0.1 9.7 7.6 2.3 1 23 384 407 384 407 0.95 4 10 0.0021 0.2 12.9 3.4 1 23 410 432 410 433 0.95 5 10 0.22 20 6.6 6.9 1 19 436 454 436 459 0.92 6 10 0.024 2.2 9.6 0.8 3 21 475 493 474 498 0.94 7 10 7e-05 0.0066 17.5 0.6 2 23 507 529 506 529 0.94 8 10 1.3e-05 0.0012 19.9 0.2 1 23 535 558 535 558 0.92 9 10 0.0071 0.67 11.2 5.1 3 23 569 589 568 589 0.97 10 10 0.00022 0.021 16.0 3.1 1 23 595 618 595 618 0.98
Sequence Information
- Coding Sequence
- ATGGATGAAGAAGTAAAAGTAGATGTGAGTTTGATAAGTACCTGTCACGGGTGCTTGAGTACTGACCGTGTACTACATCCTCTGGGGGACAATTCAGATATGCTTACGAGCCTGCTCGGCTGCCACAGGCATTGTTTAGTATACGGTATAGAAGACATAAAAATATGTTGGGAATGCAAGAATATACTAAATAAGTTCAAGTTGTTTCAAAACCAAGTGAGGAAAGCACAGGCAGGCCTGATGAAGATGCTGTATGAAATAGACTCCCATGTAAGCACCTTATCTAAACTGAAAACTGTCAATAAGTATTACTATGACTTGGATATAAAGCATTACTCGTTCACAAAAGTAAAAAAAAATAATGAACACATAAATACAGTTACAATTATAAAAACAGAATTTGAAGATATCCGTTCGTACTCTGACGATGATGAACAACCTTTCAACGAGGATAAAACTGATGGACTAGATAATAAACCTGATGGATTTGATATTAAATTTGATGGACTTGATAGTAAAGTAGATGGACTCGATAATAAAGATGATATGTCAACAAAAGTGGATGATATTGACAAAGAATCAATTCCAGATGATTTCAAAGAGATAATAGTTACAAAGAGTGTATCAAAAATAGAAATTCCCGTTGATGTGAAAGATGAGATGGTGACACCGGAGAATTTGATAAAGGTTAAAGCGCCTAGAAGAAAAAAAGATACTAAATGTGTAGACAATGTTGTTGGGTATTATAAAAAATATGCAAAACTAGTCAAAACTGAGGAAAAGGAATGGGGCAGTTGGGAAGATGTGAGGAATCATTTCGAAGCGGTGCAGTTTACCGAGAAAGAGATAGAAGACCATTTCTGTACGAAAGACAGATATAACATATCATTCCATCGCATGCCTCACAAATGCAACATGTGCATATTGGGGTACACGAAGAAAGATGATTTTAAAAGGCATAACGATTTGAATCATCATAAGGAAGGTACATCATACAAGTGCAGCCTATGCAACAAGAAACAAGCTTCCCACGATGCGTTAGAGAAACATTGGCGAACGCATTCTATAGTGTTTAGATGCAAAACTTGCTCGGATGTTTGTAAAGAGACCTTTATGAGGAAGCATTTGGATCACGCGCACACGAAACTCTATGACTGTACCGTTTGTCATGCGAAATTTGGAACTCTGAAGCGATTCACCATCCACTACAAGGAGCTTCACATGAAATATGTTTGTGATTACTGTGGCCACACACTAACTAGTAAAAAGAAAATTGAAAAACACATTAGCGAGCATCACATGACTTACACCTGCAAAGACTGCAACCGTTCATACAAGAACTTTTTGTATTACAAGAAGCATTGCTATTCACTGCACCCGGAAAAGATGGGTTCGAACAGCACTCCAGCGGAATTGTCATTTTGTGTTGAGTGCAATAAGCAATTCCCTAGTGTCGACAAGTACAAAACCCATTTGAGGGCTTCCACTAAACATAACAAGAAAAAAAATGCACCCATACCATGCCCGGAATGCGGTAAATTGTTTAATCGCAAAAAGAATATGAATTATCACTACAACCTTTTCCATTTGAAGAAAACCAAATATTATTGTGAAATTTGTGACAAGTATTTCGCGAGACCGTCCGGCCTCAATACCCACAGAGTAAATGTCCATCTAAAGATTGAGAAGGTGAAAGATAAAATATGTGATCTGTGTGGACGAGCGTTTCATAGTCACGTGGTACTCCGTCACCATCGCCGCACGCACACAGGCGAGCGACCGCACAAATGTCCGCATTGTTCCGCAGAGTTCATCCAAAAGTATGCGATGCAAACGCACGTTCGCACTCAACATAAGGAGTTTCTCAAGGACGTACCTTTCAAGGAACAAAAGAGAAATAATATAGTTCCCGCCTGGCCGGATACCGGATATTTTGTTTAG
- Protein Sequence
- MDEEVKVDVSLISTCHGCLSTDRVLHPLGDNSDMLTSLLGCHRHCLVYGIEDIKICWECKNILNKFKLFQNQVRKAQAGLMKMLYEIDSHVSTLSKLKTVNKYYYDLDIKHYSFTKVKKNNEHINTVTIIKTEFEDIRSYSDDDEQPFNEDKTDGLDNKPDGFDIKFDGLDSKVDGLDNKDDMSTKVDDIDKESIPDDFKEIIVTKSVSKIEIPVDVKDEMVTPENLIKVKAPRRKKDTKCVDNVVGYYKKYAKLVKTEEKEWGSWEDVRNHFEAVQFTEKEIEDHFCTKDRYNISFHRMPHKCNMCILGYTKKDDFKRHNDLNHHKEGTSYKCSLCNKKQASHDALEKHWRTHSIVFRCKTCSDVCKETFMRKHLDHAHTKLYDCTVCHAKFGTLKRFTIHYKELHMKYVCDYCGHTLTSKKKIEKHISEHHMTYTCKDCNRSYKNFLYYKKHCYSLHPEKMGSNSTPAELSFCVECNKQFPSVDKYKTHLRASTKHNKKKNAPIPCPECGKLFNRKKNMNYHYNLFHLKKTKYYCEICDKYFARPSGLNTHRVNVHLKIEKVKDKICDLCGRAFHSHVVLRHHRRTHTGERPHKCPHCSAEFIQKYAMQTHVRTQHKEFLKDVPFKEQKRNNIVPAWPDTGYFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -