Efus005914.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992049.1:7319240-7322798[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3.4e-06 0.00032 21.7 0.1 3 23 276 296 274 296 0.96 2 11 7.5e-06 0.00071 20.6 2.1 1 23 373 396 373 396 0.97 3 11 0.00052 0.049 14.8 2.8 1 23 400 422 400 422 0.98 4 11 0.00075 0.071 14.3 1.5 2 23 444 466 443 466 0.94 5 11 6e-05 0.0057 17.7 2.8 1 23 470 493 470 493 0.98 6 11 0.0022 0.21 12.8 0.6 2 23 516 538 515 538 0.90 7 11 5.8e-06 0.00055 20.9 3.8 1 23 548 570 548 571 0.96 8 11 0.022 2 9.7 1.6 3 23 588 608 587 608 0.98 9 11 0.0017 0.16 13.2 0.9 1 23 614 636 614 636 0.96 10 11 0.94 89 4.5 4.9 1 22 642 663 642 666 0.90 11 11 0.00041 0.039 15.1 0.1 3 23 716 736 714 736 0.97
Sequence Information
- Coding Sequence
- ATGGCAGAAACGAACATTTCAATTCATGAGAACACAGTAGATACAAAAGATATAGATATCAAAGAAGAATTCAGCTTGCACATAGAAGATGATAACTTAAACTTGGATGTTAAATCGGAGACTGATGACATTGCTGATAGTACTGCACATAATGCATACCAAGACTCAGAACTACAAATAAAAGATGAATTGACAGTCAGTATTGAACAAGATGATTCTCAAAATAGTGACGAAATAGCAAATATCAAAGATGAGGATGCGGAAACGGAGAGTATATTACCTATAAGTCCTGATAGCATAGATATGAAGCATGAAGCAGGACAAAATGATAGCGGAGTGGTTTCATATGACTTCCCAAATTATGATGACAGCATGGACAGCAGTGAGGCAGCAGCTTTAAGTCACGTGGAAGCATGTTTGAGTGATGAAGTGAATATCAAGTCAGAAAATGAGTATGAAGACAACCAGAAAGATTTCCCACGGGTAATCAAAGATGAAACTGAATTGACTGTAACGGAGACTCACCTAATATCAAACAAGCTGATCAACACAACATCTTCCATTACTAGCGCTGAAGACGGGATCATAGAGTCGCAAACCACCAAAACTTTGATCATGGAGATCCATCCTATGACCCGGGAACATTCACACTTGAAAATAACAAACCCTGAAGAAATCTTACCAACAACAAATGAACCCAGCCAAGACTATGAGCAACCCTTTCAATTAAATTCCATCACCGGCAACATTATGTCTCTAGAACAAGAAGCTTACGGATTGTTAAAGACTAAGAAACATACAGCCAACTTGGAAAAAACAATAATTTGCCCAAAGTGCCCAAAAGCATTCGCCAAAAATAATGCACTGAAGAGACACCTTAAGGTCCATCTTTCAATAGAAACACGAGCTATGGGTGTTATTAGAGGCATAAAGAAACGCAAAGAAAATAAACAAAAGCTAAAGGAAGAATTCGAGTCAACGGCTGAACAAGACGCGAAAAGCATCAAAGTAGAGAAAGAAGGGTATAAATGTACATGCGGACAAGTATTCCAAAGGCGGAGTCGAATGGAAACCTGTCTAAGATCCCACTCCGACGACTACGCCGATTCAAGCACATACCCGTGCACGACATGCGACAAAAAATTCAAATCCAAAGAACTCCTGATTACCCATCGCCAGAAACAACATCGGAAGAAATATCCTTGCAAATTTTGTCCAACAGATTATCACACGCAAAAGGAACTGTTCAAACATCTACGAATACATCAGAAGGTACAATTAATGGAGTTCAAAGTCATATCTGAAGTGGCGAAAGGGAATCAGGAACTGCAATGCTTGCTGTGCACAAAAACATGCTCCAAACTATCCGACTTGAAATCCCACATAATGGAAGGTCACAAAGAACCATACAAGTGTCCACATTGCAAACAAAATTTCACAAGAATAATCGATTTCGCTAATCATATAAGGAAAACTCACCCTGATGTCGGAAGCCAGTGCGTTCTGGATGTTTTAGAAGCATTTTCGAAGTTGGTCAAAGCGTGGAAGTGCGAGAACTGCGGGAAACAGTTTCATAAAGCAGACAAATTAGCTTTGCACCAAGTTGAGGAACATACACCGGATATGAAGAATGAACAACACTTCCAGTGTGGAGATTGTCAGCGGGTGTTTGTTAGTAAATGTGGCTTGAACTCTCACATGCGGATGCACCACAGAGCAGAAGAGGTTCAAGAACCGGAGCCAGCTGAAGTGGGAGTTTTGTGTTTAGAATGCCGCAAAGTATGCCAAGATATGAACGCCTTAACCTCGCATATGCGCCTCCATTCCATGGAAAGAAAATACCCCTGCAAGTACTGTGACTTCCGCTTTGCCAGTCCGCAGAAGAGGAAAAAGCACGCGGAAATTCACACGGGCGATATGAAATATGTATGCTTTATCTGCGAGTACCAATGCAGCTCGGAGAACAGGTTAAAACATCACAAAATGTCCTTAAAACATTTGAACATGAAACAGTACCTTTTGACTGGGAAGCCGTTGATAGAAGAGGAGCAATCGACGTCGAAAAAGCAAAAGATAAAAGATACGTTGCGAAAGAAAGAGTGGGGGGTTAAAAAGAAAAAGAAATGTGTTGAGAGTGATATAGCTTGCGATATTTGCGGGGAGAAGTTTGCCAGTGAAACTGAAATGCAGGAGCATAAGCAAACTCATCCGTTTATAGAGTTCCCGAATGATGATAAACCTAGTAGGATATTTTTTAAGTGA
- Protein Sequence
- MAETNISIHENTVDTKDIDIKEEFSLHIEDDNLNLDVKSETDDIADSTAHNAYQDSELQIKDELTVSIEQDDSQNSDEIANIKDEDAETESILPISPDSIDMKHEAGQNDSGVVSYDFPNYDDSMDSSEAAALSHVEACLSDEVNIKSENEYEDNQKDFPRVIKDETELTVTETHLISNKLINTTSSITSAEDGIIESQTTKTLIMEIHPMTREHSHLKITNPEEILPTTNEPSQDYEQPFQLNSITGNIMSLEQEAYGLLKTKKHTANLEKTIICPKCPKAFAKNNALKRHLKVHLSIETRAMGVIRGIKKRKENKQKLKEEFESTAEQDAKSIKVEKEGYKCTCGQVFQRRSRMETCLRSHSDDYADSSTYPCTTCDKKFKSKELLITHRQKQHRKKYPCKFCPTDYHTQKELFKHLRIHQKVQLMEFKVISEVAKGNQELQCLLCTKTCSKLSDLKSHIMEGHKEPYKCPHCKQNFTRIIDFANHIRKTHPDVGSQCVLDVLEAFSKLVKAWKCENCGKQFHKADKLALHQVEEHTPDMKNEQHFQCGDCQRVFVSKCGLNSHMRMHHRAEEVQEPEPAEVGVLCLECRKVCQDMNALTSHMRLHSMERKYPCKYCDFRFASPQKRKKHAEIHTGDMKYVCFICEYQCSSENRLKHHKMSLKHLNMKQYLLTGKPLIEEEQSTSKKQKIKDTLRKKEWGVKKKKKCVESDIACDICGEKFASETEMQEHKQTHPFIEFPNDDKPSRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00649390;
- 90% Identity
- -
- 80% Identity
- -