Efus014587.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992024.1:9336299-9344610[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.026 2.4 9.5 0.1 1 23 202 225 202 225 0.96 2 11 0.013 1.3 10.3 5.5 1 19 288 306 288 311 0.92 3 11 4.7 4.5e+02 2.3 0.4 6 23 321 338 319 338 0.94 4 11 0.0012 0.11 13.7 0.3 3 23 346 366 344 366 0.96 5 11 1.3e-06 0.00012 23.0 1.0 1 23 374 396 374 396 0.99 6 11 0.00071 0.066 14.4 1.5 1 23 405 428 405 428 0.97 7 11 0.0035 0.33 12.2 0.1 1 23 434 456 434 456 0.97 8 11 6.7e-07 6.3e-05 23.9 3.7 1 23 462 484 462 484 0.98 9 11 0.00038 0.036 15.2 1.0 1 23 489 511 489 511 0.98 10 11 2.9e-06 0.00027 21.9 4.2 1 23 517 539 517 539 0.97 11 11 0.00022 0.021 15.9 2.1 2 23 546 568 545 568 0.95
Sequence Information
- Coding Sequence
- ATGGCCATGAACGTAAAAGATCTGTGTAGACTATGTGCAGGGAAAGACGAGTTCTCAAAAGATCTTCTAGATGAAAGTAACAAGAATGTTCTTAAGATTTTGCAAGATTTCATACAAATTTATATATATGAAAATGACAACCTTCCTACAAAGATCTGCTTAACCTGTGAAGAAAAAATGGTCTCATTTCAAATATTTGTGCTAGAATGTTACAAGGTTCAGGATACATTACAAAAGATGTATGAAGAAACTTTGGAAGATTTCACTATTAAAATGGAGCAGCAAACTGCAACTGAGTCAGAAAAGCCTTCAATTATCAAGTGTGAGGTTAAAGATGAAATAACTGCTGAAGATATTGTCACTGCACTTAAAAATGAGGATACACTGACAGAAATTAGTTTATATGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAATAGCCACATTGAAACAAATAAAAAGAAAACAAATCAAACGAAAAGTCCAAATCAAAATGGATACTGAAAAACTCAATGATGTTTTAAAGTCTACAAATTTTAAAGTCAAGGATCTTGTGAAATTTGAATGTGTGTTATGTGAAGAGAGAATGAATAGCTGGGCTAATCTACGAGTGCACTATGCAAAAGATCACAAGAGCGAGCCAGTTGTTATCTGTCTCTGTGGCTATGAAATAAAATCAAAAAGTATTTTATATAAACATGTGTCTGATCACAAACTAGAAAGCAAAAAATTGAACCAAGCTGCAGATAGTGAGGATGAAAAACAAGAACAAAATGATGGAAAGTATTCAAATCTAAATGTTAGGGATTTTGTTAGGTTCATATGTCACCAGTGTGAACGGGTGTGTTCGAGCTGGTACAGTTTGAAGGCTCACTGCCAAGACAGACATAAAACTCTACCAATAGTTCAGTGCAGCTGTGGCATCACACTCAAATCTAAGTCTGTCATGTACAAGCATGTACAAGATCATAAAAACCCTGATGTTTTAGCATGTGATAAATGTCCTAGGATAACGAAAACATTGGCGGCTTTAAACAAACACAAAATGCGACATGTTCCTAAGTCAGAAAGAAAGTATACATGCGAATCCTGCGATAAGATATTTACAACGAAAGACGCGTTGAAATCTCACGAAAGATCTCATATTCCAATAGAAGATAGAAAAATTTATCACTGTGAAGTGTGCAATCTCAAGTTCACGACGCGGTCGTCTGCGGCGTCTCACAAGCGCGTGGTGCACGACAAGATCAAGGGATACGTGTGCGATCTGTGCGGGTACGCGTGTGGGACGGGCGGCGAGCTGCGGCAGCACCGCGCTATACACAGCGACGCTAAGCCCTTCGTCTGCAGAAAGTGCTCTAAATCTTTCAAAACATATTCAAATCTGAAGACACACATGGACACTCACGAGGAGACATCGTACGAGTGCTACATCTGCCGACGCGTGTTGAACAGTCGACGGACGCTGCGGAAGCATCTGTTAGTGCACGAAGACAAATGCCGGCACGTCTGCTCTTACTGCAACAAGGCGTTCAAGAGGCGGCAAACTTTAAAGGTCCACATGTACACACATACGGGCGACAAGCCGCTGACCTGCAAGTGGTGCGACGAGCGGTTTGCGTACGCGTCCACACTGCGCTCGCACCGACTGCGCTGTCACCCCGAAAAGATGGTAGCGCAGGCGCATGCAGCCGGCTACCAGCCTTACTCTCACATCAACGTGCATCAGGATTTCATCAAGAACGACGTGGTAGCAGTAAGTGTACCAGTAGCTAAAAACGAGGTGGAGGCTATGGTAGCGTAG
- Protein Sequence
- MAMNVKDLCRLCAGKDEFSKDLLDESNKNVLKILQDFIQIYIYENDNLPTKICLTCEEKMVSFQIFVLECYKVQDTLQKMYEETLEDFTIKMEQQTATESEKPSIIKCEVKDEITAEDIVTALKNEDTLTEISLYEXXXXXXXXXXXXXXXXXXXXXXXTIATLKQIKRKQIKRKVQIKMDTEKLNDVLKSTNFKVKDLVKFECVLCEERMNSWANLRVHYAKDHKSEPVVICLCGYEIKSKSILYKHVSDHKLESKKLNQAADSEDEKQEQNDGKYSNLNVRDFVRFICHQCERVCSSWYSLKAHCQDRHKTLPIVQCSCGITLKSKSVMYKHVQDHKNPDVLACDKCPRITKTLAALNKHKMRHVPKSERKYTCESCDKIFTTKDALKSHERSHIPIEDRKIYHCEVCNLKFTTRSSAASHKRVVHDKIKGYVCDLCGYACGTGGELRQHRAIHSDAKPFVCRKCSKSFKTYSNLKTHMDTHEETSYECYICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFAYASTLRSHRLRCHPEKMVAQAHAAGYQPYSHINVHQDFIKNDVVAVSVPVAKNEVEAMVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00034073;
- 90% Identity
- -
- 80% Identity
- -