Efus012650.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992051.1:5245858-5250089[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0012 0.11 13.7 0.1 2 23 37 58 36 58 0.96 2 12 0.053 4.9 8.5 0.2 2 23 155 177 154 177 0.92 3 12 8.1e-06 0.00077 20.5 0.8 1 23 198 220 198 220 0.98 4 12 0.004 0.38 12.0 0.0 1 23 224 246 224 246 0.95 5 12 0.0019 0.18 13.0 0.7 1 23 375 397 375 397 0.98 6 12 0.0024 0.23 12.7 0.2 1 23 401 423 401 423 0.94 7 12 0.00074 0.069 14.3 2.7 1 23 430 453 430 453 0.97 8 12 0.0017 0.16 13.2 1.8 2 23 459 481 458 481 0.94 9 12 0.00014 0.013 16.6 0.6 1 23 487 510 487 510 0.98 10 12 0.0002 0.018 16.1 0.6 2 23 517 538 516 538 0.97 11 12 5e-08 4.7e-06 27.4 1.1 1 23 544 566 544 566 0.98 12 12 4.1e-07 3.9e-05 24.6 0.7 1 23 572 594 572 594 0.98
Sequence Information
- Coding Sequence
- ATGAAAGATTTAACAACCCTATTGGAACACCTTGTAGAAACACACAAGAAACCTAAAGTAGAAAAATTCGGTGCAGGCATCGTGCCCTATCTACTAAACAATAAAATTGAATGCGCTGAATGTGGCCTTATTTTCGATCGGTTCTTAAAATTAAATAAACATATGACAGTGCACTATCCTATTTTTGTATGCTCTGAATGCGGGCCCATCATCTTAAAATGGAAAGAGAAACACTATGAGTTTGGCGACGCGCGAGACAATGCGGCCATTATCTTGGAGTGTTCAAACGTATGCCCATTCAAATTCAATCGAAGTGCATTCTGCTGTGCTTACTGCCCCGTTCCACACTCGTCAGAATTTGGTCTTATCAAAGATCATACTTCATCAGAACATAAGAATAAGGCTTCAACCGTACTGACTTCTAGATCTAGAGCGGTAATCAAAGCTGATGTAACGGATTTGAGATGTGAAATATGTCAAAAAAGCATGAAAAATATACGGACGCTTTTCGAACATCTAATCGAGGCTCACAACAAGCCTTTGGTAAAAAAGTACAGAACTGGCATCGTGCCTTATCTACTGACAGATGGATTTACATGCGCCGAATGTGGCATGAGTTTCGACCGGTTCTCGACATTAGATAAACATATGAACAACCACTACCGCAACTATGTCTGCTCTATATGCGGACAAGCTTTTATCAGTGGCCAAAGATTGACCGGACATATTTTGGGACATAAAAGGTCAATCGGCATAAAAAGGAGGTCAAAACTCGGAGAGTTTGGCGACGAGCGAGACAACGCGGCTATTATCTTACAGTATTCCAATATGTGTCCGTTCAGATTTCGGGGACATACATTTTATTGCGCAAACTGTCCTTTCACTTCGGTAGAGTTTGAATCCATCGCGAAGCACAGCGATGAGCATGAAGATAAAACGGATTACTTGCGCGTATCGAGCAACGTAATACTCAAAGCGGATGTGACGAATCTGAGATGTGAAATCTGCCTAATGGGGATGAACGATATAGCGATGTTGTTTCAACATCTCATCGAAGTACACAATAAGCCCTTAAAAAGTGAATACGACACCCGCATCGTACCGTACTTGTTGATAGACGGATTCAAATGCGCTGAATGTTTTCTTGAATTTGATCTCTTTAGGAATCTAAACAGCCATATGAATGTGCACTATCCTTATCACGTCTGTGTAGAATGCGGTGTGGCTTTCTCGTCGGAGAAAAGACTTCAGAATCATGCCATACAACATTCAGACAAGCCACCTCAGTACAAATGTACAGTATGCGACGAAACATTTCAATTTCGATCTGAAAAACGTAGGCATTTGAGTTCAAAACACAATATTTACTTGAACAAATGCCCGTACTGCGGCGAGCTATTCAAACAATACGCTCAAAGGACGAGACACATAAGCGAGTGTCACGACGTTAGAGTCAACTACCCCTGTCCTATGTGTCCGAAAGGGTTCATGTATTCCTCGCACAGGTCGGCACATGTCCGACGTGTTCACAAGAAAGAGAAGAACGTCTCTTGCTCCGTTTGTAGCGTCCAGTTCTTCAGCTCCACTGAACTTAAAAAGCATATGATCACACACACTGGGTTAAAAACTCACCAATGTCAAATATGCAGTAAATCTTTTGGGAGGAATAGCAATTTGGCGGCACATATGCGTATTCATAATAACGATAAGAGATTTGTATGCGCTCATTGTGATAAAGCGTTTGTTCAAAAAGGTAGTATGGAGATTCATATGCGAACTCATCAGAAGCCGTCGAAGCCTTCACCGTCTGAAGAAGATTGTATTGATATGAATAACTACTTGAATGTTACGCTTGCGTCAACCTCGGTCAAGTAA
- Protein Sequence
- MKDLTTLLEHLVETHKKPKVEKFGAGIVPYLLNNKIECAECGLIFDRFLKLNKHMTVHYPIFVCSECGPIILKWKEKHYEFGDARDNAAIILECSNVCPFKFNRSAFCCAYCPVPHSSEFGLIKDHTSSEHKNKASTVLTSRSRAVIKADVTDLRCEICQKSMKNIRTLFEHLIEAHNKPLVKKYRTGIVPYLLTDGFTCAECGMSFDRFSTLDKHMNNHYRNYVCSICGQAFISGQRLTGHILGHKRSIGIKRRSKLGEFGDERDNAAIILQYSNMCPFRFRGHTFYCANCPFTSVEFESIAKHSDEHEDKTDYLRVSSNVILKADVTNLRCEICLMGMNDIAMLFQHLIEVHNKPLKSEYDTRIVPYLLIDGFKCAECFLEFDLFRNLNSHMNVHYPYHVCVECGVAFSSEKRLQNHAIQHSDKPPQYKCTVCDETFQFRSEKRRHLSSKHNIYLNKCPYCGELFKQYAQRTRHISECHDVRVNYPCPMCPKGFMYSSHRSAHVRRVHKKEKNVSCSVCSVQFFSSTELKKHMITHTGLKTHQCQICSKSFGRNSNLAAHMRIHNNDKRFVCAHCDKAFVQKGSMEIHMRTHQKPSKPSPSEEDCIDMNNYLNVTLASTSVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -