Basic Information

Insect: Ennomos fuscantarius
Gene Symbol: salm
Assembly: GCA_905220475.1
Location: HG992036.1:15395540-15397279[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.53 50 5.3 2.2 2 23 170 191 169 191 0.93

2 13 2.5e-07 2.3e-05 25.3 3.7 1 23 197 219 197 219 0.99

3 13 3.1e-06 0.00029 21.8 0.4 1 23 247 269 247 269 0.99

4 13 0.0014 0.13 13.4 4.2 1 20 275 294 275 298 0.94

5 13 0.00014 0.013 16.6 1.4 1 23 307 329 307 329 0.98

6 13 2.3e-05 0.0021 19.1 6.4 1 23 335 357 335 357 0.98

7 13 1.2e-06 0.00011 23.1 0.3 1 23 363 385 363 385 0.98

8 13 0.00014 0.013 16.6 5.1 1 20 391 410 391 413 0.95

9 13 3.1e-06 0.00029 21.8 0.7 2 23 420 442 419 442 0.95

10 13 2.5 2.3e+02 3.2 0.1 3 23 449 466 448 466 0.86

11 13 0.0083 0.78 11.0 1.7 1 22 472 493 472 495 0.90

12 13 0.0003 0.028 15.6 0.2 1 23 501 525 501 526 0.95

13 13 0.0054 0.51 11.6 2.0 1 23 532 555 532 555 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.53	50	5.3	2.2	2	23	170	191	169	191	0.93
2	13	2.5e-07	2.3e-05	25.3	3.7	1	23	197	219	197	219	0.99
3	13	3.1e-06	0.00029	21.8	0.4	1	23	247	269	247	269	0.99
4	13	0.0014	0.13	13.4	4.2	1	20	275	294	275	298	0.94
5	13	0.00014	0.013	16.6	1.4	1	23	307	329	307	329	0.98
6	13	2.3e-05	0.0021	19.1	6.4	1	23	335	357	335	357	0.98
7	13	1.2e-06	0.00011	23.1	0.3	1	23	363	385	363	385	0.98
8	13	0.00014	0.013	16.6	5.1	1	20	391	410	391	413	0.95
9	13	3.1e-06	0.00029	21.8	0.7	2	23	420	442	419	442	0.95
10	13	2.5	2.3e+02	3.2	0.1	3	23	449	466	448	466	0.86
11	13	0.0083	0.78	11.0	1.7	1	22	472	493	472	495	0.90
12	13	0.0003	0.028	15.6	0.2	1	23	501	525	501	526	0.95
13	13	0.0054	0.51	11.6	2.0	1	23	532	555	532	555	0.96

Sequence Information

Coding Sequence: ATGGAGTTTAAGATATGTCGAGTTTGCCTCGACAGGACCGCCACGATATCTGTGTTCAATACGCAGGATGACGTGCAGTACTGTACGAAAATAATGAAGTGTGTGAATGTTGTGATCGCAGAGGGTGACGGATTTCCGGACGCAATCTGCGAGGGGTGTGCCAGTGATCTGGCTGTCAGCTACGAGTTCGCATCGCGCTGTGAAGCCTCCGACAAGGCACTGCGCTGCCTCGACCTTCTGCAGACCGCTGACCTTGAACCCGAGGCCAAGCCTGAATCCAAACATGAAGTTAAACCTGAAGTTGACCCCTCCTTTGCTCAACATGAGTCTGACCTGTATGACAGCTTTACAGATAATGAACCACTTTCTAAATTTGGCTGCAAAAAAGAATTCATGAATGATAAACCAGAGATTTACTCAAATGGAAATAACAAGTATAGCTACAGTAAGAAAATTTTGCCCAATCACTTGCGCATCAGAAAAGTGAGACTCAAAACAGGACCAATTCAATGTTTGGTCTGTGACAGGTTGCTGCCATGTCACTCTGCATTTGAAACACATATGCGAACACACACTAAAGAAAAGCCATATACATGTGACATGTGTAGTAAAACATTTTCGAATAAATACACCTTAAAAAAACACATTCAAAGACATTATGGAATAACTAATGAGCACAACAAAGATAAGGCTCTTAAAGCAACAGATAAGAGAACAAAGCGGCCTAAGATGGGACCATTCCAATGTGCAATATGTGGGAAGATGGTGGCAAGTCATTCAGCTATGGAGAATCATATGAGGACTCACACAGGGGAAAAGCCATTTGCATGTGAACTTTGTGGGACCAAATTCAAACTTAAGGCCACTTTGAAAAGACACATGCACTGTAGTCATCCAGAAACCTATCCTGACAAGCAGTATACTTGTGAACACTGCGGGAAATCATTCCTTGCTAAGACTAATATAGTGACTCACATGCGAATACATACTGGATCTAAGCCATATCACTGTCCATATTGTACACAACGATTCTGCCAAGCATCCTCACTGATCCGCCACAAAAGGCGGCACACTGGTGAAAAACCATACACCTGTGAGACTTGCGGGAGATCTTTCATAGATAGAGGTTTATTAATTAAGCACCAAACTGTACATACTTCTGAAAAAAATTTCAAATGCCATATCTGTGATAAAGACTTTAAAAGTAAAGGAACCTTGAAAGTACACACAGATTGCCACAATAAAACAAAGCTCTGGATCTGCAGCTACTGCGGTATGACATTCACTTTCAAAGGCAACCTAAAGACGCATATTGAGAGGAAGCACTCTGAGAAGTCTGGGCTGTGTTTGGTGTGTAACAAAGAGTATGGCGATGTTGAAGCTCATATGAGAGTGCATACTGGGGAGAAGCCTTTCATATGCAAGATTTGCAATCAGAGCTATGGTTCAGTAAGGAGTCTGTCGCATCACATGGGTTTCAAGCACAGAGATGCTGGGAAGTTTAAGTGTGCTTTAGAGGACTGTCCTAAAGCGTTTCCAACGGCAGCCATGTTGGAGTACCACGTGTTGAAGCACCACACGCACACGACGCCGTACGTGTGCCCGCACTGTGCGCGCGGCTTCCTGCGCCCCTGCGACCTCTCGCGTCATCTCAAGCTCAACCACATGGATACGCAAACGAGAGTCAAATCGCAGTTCCTTAAAGCTATTGTTAAAGACTGCGAGCCTTCACTCTCATAG
Protein Sequence: MEFKICRVCLDRTATISVFNTQDDVQYCTKIMKCVNVVIAEGDGFPDAICEGCASDLAVSYEFASRCEASDKALRCLDLLQTADLEPEAKPESKHEVKPEVDPSFAQHESDLYDSFTDNEPLSKFGCKKEFMNDKPEIYSNGNNKYSYSKKILPNHLRIRKVRLKTGPIQCLVCDRLLPCHSAFETHMRTHTKEKPYTCDMCSKTFSNKYTLKKHIQRHYGITNEHNKDKALKATDKRTKRPKMGPFQCAICGKMVASHSAMENHMRTHTGEKPFACELCGTKFKLKATLKRHMHCSHPETYPDKQYTCEHCGKSFLAKTNIVTHMRIHTGSKPYHCPYCTQRFCQASSLIRHKRRHTGEKPYTCETCGRSFIDRGLLIKHQTVHTSEKNFKCHICDKDFKSKGTLKVHTDCHNKTKLWICSYCGMTFTFKGNLKTHIERKHSEKSGLCLVCNKEYGDVEAHMRVHTGEKPFICKICNQSYGSVRSLSHHMGFKHRDAGKFKCALEDCPKAFPTAAMLEYHVLKHHTHTTPYVCPHCARGFLRPCDLSRHLKLNHMDTQTRVKSQFLKAIVKDCEPSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00649350;
90% Identity: iTF_00649350;
80% Identity: -