Efus017661.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992050.1:6899753-6903659[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.4 1.3e+02 4.0 0.0 6 22 190 206 189 206 0.96 2 12 0.019 1.8 9.9 0.2 2 23 235 256 234 256 0.95 3 12 9.8e-06 0.00092 20.2 4.5 1 23 271 293 271 293 0.99 4 12 0.0036 0.34 12.2 3.1 1 23 301 324 301 324 0.96 5 12 1.7e-05 0.0016 19.5 0.9 1 23 331 353 331 353 0.97 6 12 0.00061 0.057 14.6 4.9 2 23 359 380 359 380 0.97 7 12 2.1e-07 2e-05 25.5 0.9 1 23 386 408 386 408 0.96 8 12 1.2e-05 0.0011 20.0 0.4 1 23 414 436 414 436 0.99 9 12 6.2e-06 0.00059 20.8 0.3 1 23 442 464 442 464 0.98 10 12 0.00038 0.036 15.2 0.3 1 23 470 492 470 492 0.98 11 12 7.5e-06 0.0007 20.6 2.5 1 21 498 518 498 520 0.96 12 12 2.3e-05 0.0022 19.0 0.0 1 23 526 548 526 548 0.98
Sequence Information
- Coding Sequence
- ATGGAAGTGACTGTGCAGGCCTTCGACAAGATATGTCGCGCGTGCCTCTCCGAATCTCATAATATGAAATCTTTATTCAATAAAGTTGAAGGTGGACAAGAATTGTTGGACTTACTCGTATTTGCGCTAAATATAACGGCTAGCGTAAAAGATAAACTGCCCAAGCAGGTTTGTAGCGATTGTGAAGCTTTTATACACAAGCCTGATCAGTTCAAAAGACGCTGCATCAAATCTGAAACTATTTTACAAAATGTATGCCAAAATGCTTTCGGAGAATATTTGGTAAGATTTAACGAAGATATTAGCAAAAACGAAGTGAAAACCGACAACGTAGTGTCTATTGATTACAAAGAATTAGAGAAACCAGATTTGCTAAATTTATTTTCAAACTCTAATAATAATTTTGAAAAGTTAGATGTAGCAAATGATGTAGAAATTCAGAATGTTAAGACAGAAGTGTCAACAGAATTTGAAAACAATGACAATGATTTTGATGATAGAGAAGAATTATCTATACCTATTGAATTTAAACAAGAAAAGAGTGAAATAAAACCTGGCAAATGTGCCTGCGGGGAAGAATTTGAAAGTATAGATATGTTTAAAGAACATTTGAAAACTATTGGCTGTAGTAGTGTAAAGCATAAAAAATATAGTAAAAAACATCATATGAGCAAAACATACATACCAATCAAGTATGAATTAGAATGTTCGAAATGCAACTTAACCTTTGATTTAGTATCAACATGGACTGCTCATCAAGAATTGCATGTTGATGATACAAATCCATTAAAACCAACCGAACTTAGACAATTCCAATGCTCATTATGCTTAAGGACATTTAAAACGAAAAAGACACTTACAAAGCACATAAAAAGACATGCAACCACGGACAACATCAAACACACTTGTTTGAAATGCAAGCGAGAATTCAAATATAAAGCATTTCTAGATAGCCACATGCTGTCTGTACATGCCACCGCAGCAGATGGATTTACTTGCGAACTATGCAGGGAAAAGTTCTCAACTCAGAAAAGCTTAGAAGTGCATATGGATAATCATACAAAGAAGAAAAATGTATGTCATTTCTGCAATAAGTCCTTTGTTATGAGTTGTACATTGAGGGATCATTTACGAATACATACGGGGGAGAAACCATTTCTTTGTTCAATATGTGGAAAAGGATTCAGCCAGAAGACGAATTTGGGGCAGCATATGAGAAGGCATATGGGTGTCAAGCCATATAAATGTGAAACCTGCAATATGGGATTCGTCTCAAAAGGCGAACTGGACTCTCACATCAGAAAACACACCGGGGCCCATCCATTCATCTGCGACGAATGTGGTAACGGATTCACCACCTCATCGGCCATGGTGAAACATCGCAGAACGCACACAGGTGAGAGACCTTACGCATGTGATCTGTGCCCGATGAAATTTGCTGCTACCGGCACATTGAAAAATCACAGAAGAACCCATACTGGTGAACGGCCGTATCAATGCTCTAACTGCGAAAAGTCCTTTGTGCAACGTTCAGATTTGATCTCTCATATAAGATGTCACACGGGGGAGAGACCGTTTGTCTGCCCCCAATGCGGCCAAGGTTTTAGAAAGGCTGCAGCCATGAAAGCACATGTTAAAATGCATGCAAGAGAGATGCAAAATGTTATATCTATGCATTGA
- Protein Sequence
- MEVTVQAFDKICRACLSESHNMKSLFNKVEGGQELLDLLVFALNITASVKDKLPKQVCSDCEAFIHKPDQFKRRCIKSETILQNVCQNAFGEYLVRFNEDISKNEVKTDNVVSIDYKELEKPDLLNLFSNSNNNFEKLDVANDVEIQNVKTEVSTEFENNDNDFDDREELSIPIEFKQEKSEIKPGKCACGEEFESIDMFKEHLKTIGCSSVKHKKYSKKHHMSKTYIPIKYELECSKCNLTFDLVSTWTAHQELHVDDTNPLKPTELRQFQCSLCLRTFKTKKTLTKHIKRHATTDNIKHTCLKCKREFKYKAFLDSHMLSVHATAADGFTCELCREKFSTQKSLEVHMDNHTKKKNVCHFCNKSFVMSCTLRDHLRIHTGEKPFLCSICGKGFSQKTNLGQHMRRHMGVKPYKCETCNMGFVSKGELDSHIRKHTGAHPFICDECGNGFTTSSAMVKHRRTHTGERPYACDLCPMKFAATGTLKNHRRTHTGERPYQCSNCEKSFVQRSDLISHIRCHTGERPFVCPQCGQGFRKAAAMKAHVKMHAREMQNVISMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00649342;
- 90% Identity
- -
- 80% Identity
- -