Efus012646.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- -
- Assembly
- GCA_905220475.1
- Location
- HG992051.1:5229379-5232897[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.012 1.1 10.5 0.1 1 23 47 70 47 70 0.95 2 21 1.1 1.1e+02 4.3 0.1 2 23 98 119 97 119 0.95 3 21 0.022 2.1 9.7 4.3 1 23 141 163 141 163 0.98 4 21 0.00012 0.012 16.8 0.5 1 20 167 186 167 188 0.95 5 21 0.34 32 5.9 0.1 1 23 198 221 198 221 0.96 6 21 0.056 5.3 8.4 0.4 1 23 275 297 275 297 0.95 7 21 0.0012 0.12 13.6 0.8 2 23 321 343 320 343 0.93 8 21 0.011 1.1 10.6 0.5 2 23 366 387 365 387 0.96 9 21 6.3e-05 0.0059 17.7 0.3 1 23 391 413 391 413 0.97 10 21 2.8 2.6e+02 3.1 0.2 2 23 419 441 418 441 0.91 11 21 0.0099 0.93 10.8 2.8 1 23 447 470 447 470 0.97 12 21 0.095 9 7.7 0.1 1 15 476 490 476 493 0.87 13 21 0.13 12 7.2 0.2 2 23 571 593 570 593 0.95 14 21 0.00027 0.025 15.7 0.4 1 23 615 637 615 637 0.98 15 21 1e-05 0.00097 20.2 0.3 2 23 642 663 641 663 0.96 16 21 0.0045 0.43 11.8 2.3 1 23 671 694 671 694 0.93 17 21 0.11 10 7.5 7.8 1 23 699 722 699 722 0.96 18 21 0.22 21 6.5 2.6 1 23 728 751 728 751 0.96 19 21 6.9e-05 0.0065 17.6 0.2 1 23 757 779 757 779 0.97 20 21 1.1e-06 0.0001 23.2 0.9 1 23 785 807 785 807 0.99 21 21 2.2e-05 0.0021 19.1 3.9 1 23 813 835 813 836 0.96
Sequence Information
- Coding Sequence
- ATGCGTCGGAGGCGTCGCGCTAACAACGAGTTGGCTGAAGAATCAGAAAAGAGAATCTCAAAAACTATGATGAGACGAAACGCGATGACGCTTCTGGAATGTTCCACAGCCTGGGCCTTCCGGTGGTTCCACGGCGCGTTTTACTGTTCATATTGTGATGCCAAATATGTGGATGCACAACCGTTGAGAGAACACGTCATTGTGACCCATTTAAACCAATCGCCACCTACCAAACGCATCTTTGCGAAACTAACCGAAAATAACATGGTCAAAATTGATATTACTGACCTTCGCTGCAGGCTTTGCAATCTACCCGTTAACGGTATCGATTCTCTTAAATACCACGTTCAATCTCACGGTAGAAGCATGTACGAAGGCTACAGCGACGGCGTGTTGCCTTTTAAACTTAGTGACAATGGATACTCCTGTCAAATATGTTCGTGTCACTTTGTTAGCTTCTCAAAAATCAATGAACACATGAACATACACTATCAGAACTACGTCTGTGATACGTGCGGAAAAGGCTTTGTATCGAAATCGCGGTTTAGGACTCACATCCATGCTGGATACAATCCTTATGAAAAAGCAAGCTATCCATGTGGCATCTGCGAGGAGATACTAAATACAAGAGCAGAAAGAAACATGCACAGATTACGCATTCACAGAAAAGGACTGGACCGCACCGAAAGCGACACCACGTCGTCCACAAACGCTCCTAAAATCGTTTGGAAGCGAAAACGGATACTATTCGAAGACAAAGCCAACGCAGCTTTGATCTTGGAGCACTCTAATGCTGTAGTTTTCAGATGGCAAAGGGGAAAATTCATGTGTGCCTACTGTTCAGAGATATACACTAACATATATGACATGCGATCGCATTCTTCCATACACAACAAGCTGGACATATTCGAGAATCAAGTCCGTCAACAATTCCCTCTTAAAGTAGACATAACTGACTTATCTTGTACCATCTGTGGCACAACGACGCGCAGCGTCGAACATTTGAAAGATCACTTGTCCAATATACATTGCAAAACTATCGATCAAAATTATACGGATGGCATCATACCATTCTATTTAACGGGAAAAGAGCTAAAATGCGTCATCTGCGATGTACAATTTGATAAGTTTATGACTCTATTTAACCACATGAATGAACACTATCCGAGTTTTGTGTGCGATACTTGCGGAAAGGCATATTCTGGACAGAACAAACTGCGATCACATCAGGTTATGCATAAGACTGGGGAATTAAAATGCACACGATGTGATTTGATTTTACCAAATCGATTGGCTAGGAACCGTCATTTGAACGACGCCCACGGGTCCAAAGAGAGATACCGCTGCCCTATTTGCGATAGCCACTTCGATTCGTATCATAGTCGCTTAAGGCACTTGAATGTCATTCATGGAGAGAAAACCGAGTACAAATGCACCTATTGTCCTGCGGTGTTTATCAGCTGGATCCAAAATCAAAAATGGAGGCCGATGCGCAAGTATAGCGATGGGAGAGACAATGCAGCCATAATTCTAGAATGTTCCAATGTTTGTCCGTTCAAATGGAAACTGGGTACATTCGGTTGTTCGTACTGCACGTTTACCTCTGCCGATTTTAGTCCTATAAAAGAACATGTTGTGAATCACCCAAACAGGGTTGAAGCCCTACGCTCGGCGCGAAACGCCGTTATTAAAGCAGATGTCACTGATCTGAAATGCGAGATCTGCTTTCATAACGTAAAAGACTTGCCAGAACTAATAGATCACTTAATTAAAGAGCACAACAAGCCCCTTGATAAGAAATACAGTCCGGGCATCATGCCATTCATTTTCAATGGAAACGTATTCAAATGCGCCGTATGTGATATATCTTTTGATCTTTTCACCAATTTAAACAAACACTTAAACGAACATTATCCTAATAGTGTATGTTCTGTTTGTGGCAAATCTTTTTCGCAATTGACTAGACTGAAAGCACATCTACTAATACACGAAAAGGGGACCCAACATCGATACACTTGCACTAAATGCGGTGACGTTTTCCACACATCATCCGATAAGAATAGACACATGGTAGAGAAACACAGAATCATGAAACACAAATGTCAGTATTGCAACGAAATGTTTAAATATTACGCATGCAAGATGAAGCACATGAAGAATAATCACGACAAGAAAATTGAGTATCGTTGTAGTACGTGTTCGGCGGTGTTCTTGCTGCGCAGTCATAGAACTAAGCACATACGACAGGTGCACATAAACGATAAACAATTCGCTTGCACCGTATGCGCTTCAAGCTTCGTCAGGGCATCTGAGTTAAAAAATCACATGATAAAGCATAGCGGGGAGAAAAAGTACCAGTGCCAAGTGTGTAAAAAAGCCTATGGAAGAAAAGACACATTAAAGGAACACATGCGAATACATAACAATGACAAGAGATATGTTTGTGGAAATTGTAATAAAGCGTTTGTGCGGAATTGCACTTTGAAGATTCATTTAAGATCGCATCATCCTAACCCTGAGATGGCTGAGTAA
- Protein Sequence
- MRRRRRANNELAEESEKRISKTMMRRNAMTLLECSTAWAFRWFHGAFYCSYCDAKYVDAQPLREHVIVTHLNQSPPTKRIFAKLTENNMVKIDITDLRCRLCNLPVNGIDSLKYHVQSHGRSMYEGYSDGVLPFKLSDNGYSCQICSCHFVSFSKINEHMNIHYQNYVCDTCGKGFVSKSRFRTHIHAGYNPYEKASYPCGICEEILNTRAERNMHRLRIHRKGLDRTESDTTSSTNAPKIVWKRKRILFEDKANAALILEHSNAVVFRWQRGKFMCAYCSEIYTNIYDMRSHSSIHNKLDIFENQVRQQFPLKVDITDLSCTICGTTTRSVEHLKDHLSNIHCKTIDQNYTDGIIPFYLTGKELKCVICDVQFDKFMTLFNHMNEHYPSFVCDTCGKAYSGQNKLRSHQVMHKTGELKCTRCDLILPNRLARNRHLNDAHGSKERYRCPICDSHFDSYHSRLRHLNVIHGEKTEYKCTYCPAVFISWIQNQKWRPMRKYSDGRDNAAIILECSNVCPFKWKLGTFGCSYCTFTSADFSPIKEHVVNHPNRVEALRSARNAVIKADVTDLKCEICFHNVKDLPELIDHLIKEHNKPLDKKYSPGIMPFIFNGNVFKCAVCDISFDLFTNLNKHLNEHYPNSVCSVCGKSFSQLTRLKAHLLIHEKGTQHRYTCTKCGDVFHTSSDKNRHMVEKHRIMKHKCQYCNEMFKYYACKMKHMKNNHDKKIEYRCSTCSAVFLLRSHRTKHIRQVHINDKQFACTVCASSFVRASELKNHMIKHSGEKKYQCQVCKKAYGRKDTLKEHMRIHNNDKRYVCGNCNKAFVRNCTLKIHLRSHHPNPEMAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -