Basic Information

Gene Symbol
-
Assembly
GCA_905220475.1
Location
HG992026.1:11039536-11045048[+]

Transcription Factor Domain

TF Family
THAP
Domain
THAP domain
PFAM
PF05485
TF Group
Zinc-Coordinating Group
Description
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-09 5.8e-07 30.9 3.2 5 85 9 91 6 92 0.73
2 2 0.15 81 4.8 0.8 31 80 874 922 852 925 0.76

Sequence Information

Coding Sequence
ATGCCTGGAAAAGGAACATGTGCCAAATGTGGAATCACTGCAAAACAAAGCCCCTCTTTGAAGTTTCACAGATTTCCTCACGTGTCTAGAAAATATGAGTCTCTCAGGGCTAAAGTATGGGCGAAATTTTGTTTTCCCCAAGAAGATTGGACATCCGATGAAGCCTTGGAAAATTTGCACAAACAGCATAAAATGCTATGTCAAAAGCATTTTGATGATTCATCATACATTAACAGCGATAAAACAAGATTGTCTCAGTTCGCAGTTCCTACTGAAGCTTTAGTAAAGTTTATTCAAAATTTGCTAGCTCAACTAAGAGAAGAACGAGATACACCTCAAGTACATCAAGACATAGTTGAAATGGAAGTGGTAGCTGGTACATCTATATCTGTGGAACACTCAAAAAGTTTACATGATGAGCCGTATATTCTACAACATCAAGCGATGGAAGTTGAAAAGTTTGTGGTAGCCGGTAAATCTATGTCTGTCGAACATTCTAAATGTTTACAAGCTGAGCAGTATACTCCACAACACCAAGAAGTCAAAGTTGAAGCTCATGGCAAACGGAGAAAAGGAATTCTAGAGGACTTAAATGTAAAAAAATCTATACAACTTTCACCAAGAAAGCGAAAGTTGTATGCAAAGTGCAGAAAGAATATGTCTGAAATATTTAGACTTCGGGCAAAGATTAAAAAAATAAAACAATGCAAAAGATCAGTGCTGAGTGTATTGTCATCAAATAATGCAGTTAACGATATGATGAAAAGAAATCTCAGTAGCTCATTTTACTTACTACTCCAAAGCCAGCTGAAAAATGTCTCCAAAAAATTAACTGGAAGGAGATGGTCTGTAGATGATAAAATTCTCGCTTTAGGCATCTATAAGAAATCAAGCTCATGCTACAGGCTATTGCGTAGATTATTTTGCTTGCCAAGTGTGAGCTCACTGAAAATGTTACTAAACAAAATACCCTTGGTTTGCGGGATCAATGCCCAAGTGGTGGAAACAGTAAAAGAAATAGCTTCAAAGAGAGCTGACAATGAAAACTTATGTATGGTGGCATTTGATGAAATGTCAATAAGAAAAAATTTGACTTATAACACCAAACTTGACCAGTTAGACGGCTACCAAGATCATGCTCGTCAAGGCCGCACACAACAAATTGCTAGCCACACACTAACATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCGGAGAATGCGTCACGGCAGACAGATTGAGTGTACTAATCAAAGAGGTCCTGAGTGCTTGTTTTAGTGCTGGATTGGTAGTGATGGGCATTGTGTGCGACTTAGATGGAGTTAATATACATGCTATTAATTCTTTGGGTTCAACAAATAGTAAACCATACTTTCAACATGAGGGGCATGAAATTGTGACAGTCCTGGACCCACCCCATCTGCTGAAATGTTTTAGAAATAATTTCCTAAAACATGATATAAAGTTTGCACAAGACGTAACAATTGATGGGAAGCAAAAACAAGGTATTGCAAAATGGAACCATATTGAAGAGTTCTTTAGACTGGAGAAGCAAAATCCAAATTTTGTGTTTGCTCCAGCGTTAACTGAGCAACACTTACACCCAAATGGGAAGCAGAAAATGAAAGTATCTTTTGCTGCTCAAGTATTAAGCCATTCAGTTGCAGCTGGATTATTTGCCAAAGTAGCTCAAAATGAATTGCCACATGACGCCGTAGCTACAGCAACTGTGATCAGCAATATGGATAAACTGTTCGATTCGATGAATGGCGATACACCGGATTGGAAAAGGGGGAAACAATTCCTCTCCAATATGTCCGCAAGCAGTCCACATTTAGAATTTTTCAAAAAAATGAAAGCATTTTTTTCAGACATGACGTTTTTAGAAGCTAGATCCAAACCTCCATCACAGGAGGGATGGGTGCGGACACTTAATGCAATAGAAAAAATTTGGCACAACCTGAAACAACATGGTCTACAAACACTGTCAGTAAGGAAACTTAACCAAGATCCGTTAGAAAATTGTTTTGGGTGCATTAGAAACAATTGTGGCTCTAACCCAAATCCTACTGCAGTGCAATTTGTTGCAGCATTAAAAACCAGCATTATAACAAATTTGATTAACAACAGCAAAAACAGAAATTGCCTTGACGATAATAATGATTTGTTGAGTGATTTTAAATGTTTTCTCACTCAAGATAATAAAGAAACGGTGCCTTGCTTGCTGAATGAACAAGCATTTATACCAACAGTACTATCTGAATTTCAAGATCTGGACATGCCTGACTGGTCTGACAATTCAGGAGAAATGCAGGCATGCACATATGTATGTGGTTTTATAATCAGGCACATGAAAGTCAATTGTGCTAAATGTACAGAAATTATGACTACTGACCGGAATTCTGAAATGTGTCATTTATTTACTTCATTTAAAGAATATGATGATGCAAGAAGCAGCTTAAAATATGTTCAGCACAGTTTCAGCACAATGGTTGAAAATGCTGCAACCATTATCAATGAGTACCTAAAAGAAAACGCCCACAAAAAAAAAATTAAATTGATTTTGGGTAAGTTAGTGTTTGAAATTGTAAACAAAGAGTGGCTGAGAGAATGTGAAGAGCACTATGAAACAAATATCAAAAATATAATTAACGCCACAATTGTTATATGTATTAAACGTTTTTGCATGAAAAAGAACAGAGAATTTCTTGATGAAGCATCAAAGAAGTCTTTAAAAAGAAAGATTAATATCTTAAAACATATTTAA
Protein Sequence
MPGKGTCAKCGITAKQSPSLKFHRFPHVSRKYESLRAKVWAKFCFPQEDWTSDEALENLHKQHKMLCQKHFDDSSYINSDKTRLSQFAVPTEALVKFIQNLLAQLREERDTPQVHQDIVEMEVVAGTSISVEHSKSLHDEPYILQHQAMEVEKFVVAGKSMSVEHSKCLQAEQYTPQHQEVKVEAHGKRRKGILEDLNVKKSIQLSPRKRKLYAKCRKNMSEIFRLRAKIKKIKQCKRSVLSVLSSNNAVNDMMKRNLSSSFYLLLQSQLKNVSKKLTGRRWSVDDKILALGIYKKSSSCYRLLRRLFCLPSVSSLKMLLNKIPLVCGINAQVVETVKEIASKRADNENLCMVAFDEMSIRKNLTYNTKLDQLDGYQDHARQGRTQQIASHTLTFXXXXXXXXXXXXXXXXXSGECVTADRLSVLIKEVLSACFSAGLVVMGIVCDLDGVNIHAINSLGSTNSKPYFQHEGHEIVTVLDPPHLLKCFRNNFLKHDIKFAQDVTIDGKQKQGIAKWNHIEEFFRLEKQNPNFVFAPALTEQHLHPNGKQKMKVSFAAQVLSHSVAAGLFAKVAQNELPHDAVATATVISNMDKLFDSMNGDTPDWKRGKQFLSNMSASSPHLEFFKKMKAFFSDMTFLEARSKPPSQEGWVRTLNAIEKIWHNLKQHGLQTLSVRKLNQDPLENCFGCIRNNCGSNPNPTAVQFVAALKTSIITNLINNSKNRNCLDDNNDLLSDFKCFLTQDNKETVPCLLNEQAFIPTVLSEFQDLDMPDWSDNSGEMQACTYVCGFIIRHMKVNCAKCTEIMTTDRNSEMCHLFTSFKEYDDARSSLKYVQHSFSTMVENAATIINEYLKENAHKKKIKLILGKLVFEIVNKEWLRECEEHYETNIKNIINATIVICIKRFCMKKNREFLDEASKKSLKRKINILKHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00650116;
90% Identity
iTF_00650116;
80% Identity
-