Basic Information

Gene Symbol
onecut
Assembly
GCA_905220475.1
Location
HG992048.1:1409077-1424848[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-38 4.1e-34 117.1 0.3 2 78 163 239 162 240 0.97

Sequence Information

Coding Sequence
ATGGAAGAGCCACGGATGCGCGACCGCGCGCCGCTCACCGTCATCGTCGCCCCCAGCAACGCCTCGCCGCCACGGCTGTCCCCCGGCGACCTCCTCCCCGACGGCGATGCCGCCTTCCACCCGCTGTCTGCAGTCAACGGACGCCTCACGCCGCCCGGGCTAGAACCGGCCTCGTACGCCACACTAACCCCGCTGCTGCCTCTACCTCCTATCAGCACTGTCTCCGAAAAATTCGCGTACCATGCGGGTGGAACGTTCACGGTCATCCAGCAGCAGCAATCGTACGCATCGCTATCACCGGCGGCGTACAATGAACCTCTTTCGCCGCAGTCGGCGTATAGCAGACGAAGCGCCTCGCCGAGCTCCTTCGAGAGGCGGTCGCCCACGCCGCCTCTGCCCAGCCCGGGCCTCGATCTCAATGCCGCGTTGATGGCAAGGGAAGAGCAACAGCAAGCACAGCAAACGCAGCAACCGTCACCAAACGATACGGAAGAGATAAACACAAAGGAACTGGCGCAGAGGATAAGCGGGGAGCTGAAACGCTATTCAATTCCTCAGGCTATATTTGCTCAAAGGGTGCTGTGTAGGTCGCAAGGTACCCTCAGCGACTTGCTAAGGAACCCTAAGCCGTGGTCGAAGCTCAAGTCTGGTCGGGAGACGTTCAGGAGAATGTGGAAGTGGCTGCAGGAGCCTGAGTTTCAGAGGATGTCGGCGCTGAGGCTAGCAGCGGCCCAGATTCCTCAGAGAGGCAGCTGCAAGCGCAAGGAGGACTTGGGTTCGGATACCCATCCTTCCCCGAAGAAGCCCCGTTTGGTTTTCACAGACCTCCAGCGGCGTACTCTACAGGCTATTTTTAAGGAAACAAAACGACCTTCAAAAGAGATGCAAGTGACCATAGCTAGGCAGCTTGGCTTGGAGCCCACCACTGTCGGCAACTTCTTTATGAATGCACGGCGACGCTCTATGGATAAGTGGAAGGATGATGACGCACCGACTGAGTTAGAAAATTGCGATGGCCAGGACTTGGATCACGTCCCCAGTCTGGACTCTGCAGACTCCGAGGAGGATCACGATGATCACGATGATCATCTCTTGTGA
Protein Sequence
MEEPRMRDRAPLTVIVAPSNASPPRLSPGDLLPDGDAAFHPLSAVNGRLTPPGLEPASYATLTPLLPLPPISTVSEKFAYHAGGTFTVIQQQQSYASLSPAAYNEPLSPQSAYSRRSASPSSFERRSPTPPLPSPGLDLNAALMAREEQQQAQQTQQPSPNDTEEINTKELAQRISGELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAAAQIPQRGSCKRKEDLGSDTHPSPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDDDAPTELENCDGQDLDHVPSLDSADSEEDHDDHDDHLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00790031;
90% Identity
iTF_00256641;
80% Identity
iTF_00649921;