Basic Information

Gene Symbol
JMJ19
Assembly
GCA_905220475.1
Location
HG992023.1:10264928-10293666[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-17 2.5e-13 50.9 0.1 20 88 399 465 382 466 0.82

Sequence Information

Coding Sequence
ATGGAACCGCGGAATACAGAGTCTTCGGTAGTTGCAATATCAGTTTTAGATAACGATCCCGCTACTCCGCTCACAGAAGACGGATCCCAGTCCAACCCTGCGACTCCATTTCTTGTTTTAGATAACGAATCCGCTACTCCGCTCACAGAAGACGGAACCCAGTCCAACCCTGCGACTACATTTCTTGTTTTAGATAACGAATCCGCTACTCTGCTCACAGAAGACGGATCCCAGTCCAACCCTGCGACTACATTTCTTGTTTTAGATAACGAATCCGCTACTCTGCTCACAGAAGACGGATCCCAGTCCAACCCTGCGACTACATTTCTTGCTGGAGTGAATGAAGAAACAAATAGAGACCAGTCTCTCCATCGCGTACAAGACTGGCTGCAAAGCCAAGCAGCTGCAAATTCAGAACCGGAGTTTAAAAGACCTGTGACGCCGCAACGGCGCGACGGAAGGGTAGTTAATCCACCCCCATTAGCTACTAGCAAGACTGTTTTACCGATGATGTCGGCCAAAGAACGCCGTCTAAGACAATCGTGCACAGCCTGGAGCCATATTATGATAACTGACGTCTACGAAAAAGCAGAACTCATAAAACGCTTTTGCACAGAATGCACTCGATGCACTATCATGTTCAAAGATGAATGTATTAACCTAAACAACGAAGATATCGAATGCCTGTCAGATGTCTATGATTTCAATCCAGATTTCATAAGTTCCGTCATCAGACCATATAAACGCCATACGTTTGAGGAACAAACATCAAGCGTAAATCCAAAACTGGTGGAAATTGCGAACCATGTAGACCATGTAGAAAAGCTCAAAAGTATTATGACAGAAAAGGGGAAGATGATATTTCGGGCCGCTGCTATTATTAGATACAAATTGCAAGAGATTCTTACGCCAAGTGATCACTCGCTTTTGGCTGAGGTAATCAGCATATTAACGGCTTGCAACTCTGCCCGAATGGAGGAGGATAGACCACCAACATCAGTAGCTGAACCTTCTATCGTAGGTGTAACGAGACCTCAACATAGCACCAGTTCAAATCGGTGTTCTGAAGCTACTAACGCGGGGCCGGCAATAAAGAAGCCTACTCAACAGTCTGTGAACGAATTAAATAACCCTTGTCGGTCATCGGATCTGCCGGAGGTTCCGGCATTTACACAATCCCGTAAATTTTTACCCACTGAAGTGGAGTTTACACAGTTTCAAGGGATAGAGGTTGACCTAGTGAAACTCTATCAAACCGTGCAAGAGGAAAATGGCATAGAAGCCGTTCAGAATAATAACAATTGGGAAATAGTAGCCACAAAAATGAAGCTTGCTTCGCATCGTGGAAAAGCCAAAAAATTGGAAAATATTTATCTTAAATATCTTCTTAACTACAACGCTTTAACATGCGGGGAACGAGACGCCGCGATAGTTGCGGTAGATAAATGTTGGCAGGAACGTGAGAAGCAGGCGTTGTATCGCGCACAGAATCCTCTGTGGCGGCAGGATCGCATGCGTCAAGGAATCCCGCTTAGCGATGGAGACCCATCGCACATGAGCCTGGTCTGCGCGGAGGCTGAAGAGTGCGTCACGCCCGGCCGCTCTTGCAACTACAAGTCCTTCAAAAAGTTGGCAGAACAAGTACAAAAGACGTACTTCCCCGATGGTACGCCCACTCCAGAAGAAGTGGAGATAGATTACTGGGATAAGGTGATGACTGCTCCATCACATGTGTGCGTACATGCGGCATCAATGGACGCCAAGGAGTTTGGATATGGGTTCACGGATGATCCGTCCTTATTGTCAAGTTCACACCCATGGAACCTGAAGTGGCTAAGCTGTAGCTCTTCAAACATCTTGAGCTACCTGGGACCATCGCAGGGCGCGTCGGCTCCAACTATCCACCTGGGGATGCTGTACACAACCAGTTGCTGGCACATGGACCCGACCATGGTGCCGTGGATAGAGTATCTACACCATGGGCCACCTAAGATTTGGTATTCCGTGTCAGCAGACCAAGTTAACGCATTCCGCACTGCGGTGGAGGCAATATGCCCTTTCGCAGTGCAGAATAAAGAGATTTGGCTGGCGTGCGATGTCATCATGATACCGCCGATGATGCTGGCCCAGTACGGCGTCAAAGTCGAACGATACGTACAGCACGCAGGCGAATACGTGATAGTCTACCCCAACACGTACTATGCCTGCATTGAAACAGGTTTTACAGTGTCTGAAGGAGTCTATTTTGCGCCGTGTACATTGCTCAAAAATATAGAGAGCATCTTCCTGAATCTGCGTGGGAGTTGCGAGCCGAGCCTCTTCTCGATGGAAAGACTGCTGATCGCGATAGCTGAGAATAAGGACACACCATATCTAATGCTGCAGCGCGTCGCATCGATACTGGTCTCAGTGCTAGAGTCAGAGCTCTCCTACCGGCAACAACTGGGAAACCGCAACATAGAGACTCTGCTCCCTGGTGATTTCCGGGAGCAGAATAACCGGTCGACTGCTTCCTCGTGGCAAATACAGGCAAACAGCGAGTGTGCTTACTGCCGTTGCATTCTACATCTATCCAGGGTCATTGGTGTAACAGAAGGGCAGACCAGCGTATGCGCGACGCACGCCATTTATTTGTTGGGCCTCGCTACATCTCGGGGAGAGAATATTCTCAATGTATACTGTGTTGTTCTCATCACTAACGAAGAGATCAACTCCATCATTGAAAAGTTGAAGACACGATTAAGACCACCAGCAATTACCTACGCCACCACCCCTTCCTCATAG
Protein Sequence
MEPRNTESSVVAISVLDNDPATPLTEDGSQSNPATPFLVLDNESATPLTEDGTQSNPATTFLVLDNESATLLTEDGSQSNPATTFLVLDNESATLLTEDGSQSNPATTFLAGVNEETNRDQSLHRVQDWLQSQAAANSEPEFKRPVTPQRRDGRVVNPPPLATSKTVLPMMSAKERRLRQSCTAWSHIMITDVYEKAELIKRFCTECTRCTIMFKDECINLNNEDIECLSDVYDFNPDFISSVIRPYKRHTFEEQTSSVNPKLVEIANHVDHVEKLKSIMTEKGKMIFRAAAIIRYKLQEILTPSDHSLLAEVISILTACNSARMEEDRPPTSVAEPSIVGVTRPQHSTSSNRCSEATNAGPAIKKPTQQSVNELNNPCRSSDLPEVPAFTQSRKFLPTEVEFTQFQGIEVDLVKLYQTVQEENGIEAVQNNNNWEIVATKMKLASHRGKAKKLENIYLKYLLNYNALTCGERDAAIVAVDKCWQEREKQALYRAQNPLWRQDRMRQGIPLSDGDPSHMSLVCAEAEECVTPGRSCNYKSFKKLAEQVQKTYFPDGTPTPEEVEIDYWDKVMTAPSHVCVHAASMDAKEFGYGFTDDPSLLSSSHPWNLKWLSCSSSNILSYLGPSQGASAPTIHLGMLYTTSCWHMDPTMVPWIEYLHHGPPKIWYSVSADQVNAFRTAVEAICPFAVQNKEIWLACDVIMIPPMMLAQYGVKVERYVQHAGEYVIVYPNTYYACIETGFTVSEGVYFAPCTLLKNIESIFLNLRGSCEPSLFSMERLLIAIAENKDTPYLMLQRVASILVSVLESELSYRQQLGNRNIETLLPGDFREQNNRSTASSWQIQANSECAYCRCILHLSRVIGVTEGQTSVCATHAIYLLGLATSRGENILNVYCVVLITNEEINSIIEKLKTRLRPPAITYATTPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-