Basic Information

Gene Symbol
osa
Assembly
GCA_905220475.1
Location
HG992043.1:9509705-9529564[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-26 3.2e-22 79.4 0.0 2 89 150 234 149 234 0.94

Sequence Information

Coding Sequence
ATGGGCCCGCCGGGCGCGGTGGGGCCGGGCCCGGGCGCGGGCGGCGACAGCGCCATGCCGCCGCCGACCGCGCCCGGCGAGTCGCACGACAACGGCCCGGCCGCGCCCGCCACCGCGCTCGTCACCACCGGCCCGGACGGCGCGCCGCTAGACGAGGGCAGCAGTCAACAGAGCACGCTCAGCAATGCATCCGCAGCGTCCGGCGACGACACATGCGCGTCGGGGTCCGGCAAGGGGTCGCGCAAGGAGTACGGCAGCGCGGCGCCTTCGCCCTCGCCTGGCGGTGCCTCTCACTCCTCTATGCACGATGACTACGACGCCGCGCCTTCGCCCTGGCCGCGCCCGCCTTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTTCAGATCCAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGGTGGGTGGAACGGTTGCTGGCGTTCATGGAGGAGCGACGCACGCCCATCGCCGCCTGCCCGACCATCTCCAAGCAGCCGCTAGATCTCTACCGGTTGTATCTGCTCGTGCGGGATCGCGGCGGATTCGTAGAGGTGACTAAGAACAAAACGTGGAAGGACATCGCGGGTCTACTCGGCATCGGAGCGTCGTCGTCGGCGGCGTACACGTTACGGAAACACTATACGAAGAATCTGCTCGCCTACGAATGTCACTTCGACAGGGGCGGGATCGATCCCCAGCCCATCATCAACCAGGTCGAAGCGTCCACGAAAAAGAAGAGCGGCAAATCAAATAACACGACCCCTGCAGGGTCCTCGAATTCCCAAGAATCATTCCCGGGCGGCGGCGCGGCGCCGGGCGCGCCCGCCATGGACGGGTACCCGGCGCAGTACGCCGGCTACCCGCCGCAGCCCAACCACTCGCAAGGCGGTGGGCCGGGTGGCGACAATCTAGCCGCCTCTAACCCGTTCGACGAGCCGCCGGGGCCGCGGAGACCCCCAGGTTACCAACCGGGCTACGGTTACGAATATGGATCTCCCTATCAGGCGAATAGGCCTGTTTACTCTCAGTACGGGCCTGATGGCGATAGGGGGTACCGCGGCGGCGAGTACGGCGCGTACGGCGCGTACGGCGGCGGGTACCGCGCGGGCGCGCCGCCCGGCACGCCGCCGCCCGCGCCCTACCCCGAGTACTACCGCGCGCCGCACCCGCACCCCGCGCACCCCGCGCCCCCGCCCATACAGCAGCACCAGCCGCCCATCGAGGTACCACACACACACACACTCGCACATTCCACGCTGACTTCTATCCTTGCGCTCCTAATTTATTTAGACGTGCCGGCTCATTTAAGGAGACGCGTGATGTCGGGCGGGCAGTCTCCGAGCGTTAGCCTAATGAGCTCGCAGCTAGCGCGGCAGCTGGTCGCGCCGCTCCCCAACAGCCCGAGACCCTACGTACGGACGCCCCGTTTGTACCACGCACTCAACACCGCTTCCCATCGATTGGCGATCCGGTCTCATAACCTCACACCAGCACGGAATTATTGGTCACTCGCGCCCGCTGACGTTATCCTCGCGCGCACGATCTACGGTGGCGGCAAGCCCGCCGGGCCGGGGGGAGCGGCGGGCGGGCCGGGGCCGGGGCCGGGCCCGGGCGCGGGCGGCGCGCCGCGGCGGCACCCCGACTTCGCGAAAGGCGAGCCGGCGTACTCCCCCGCGGCGGCGGGCGGGGCGGCGCCGGCCGCGCGCTTCCCGGCCGGCTGGGGCGGCTTCCCGCGCGCGCAGCCACCCTCGCCCGCCGCGCCCTGGCGCCCGCCGCCCGCCCAGCAGCCGCCCGCCTGGACGCACCACCAGTACCAGCCGCAGGTGGGTGGCAGCGGTGCCGGCGCGCTGAAGCGCGAGCTAACGTTCCCCGCGGAGTGCGTGGAGGGCGCCGTGCCGAGCGCCGACAAGCGCCGCCGGCTCACCAAGCAGGACGTCGCGCCGGTGGACGCCTGGCGCATCGTCATGGCGCTCAAGTCGGGCCTGCTGGCCGAGACTTGCTGGGCGCTCGACATACTCAACATCTTGCTCTTCGACGACACCTGCATAGGCTACTTCGGGCTCCAGCACCTACCGGGGCTGCTGGACCTGCTGCTGGAGCACTTCCAGCGTGCGCTCGCGGACGTGTTCGATGCGCCCGCCGGTGACCCAGAACCGTGGTACGCGCCGAGCGCCGCGCCGCGGGCGCCCTCTCCGCCGCGGCGGCGCGCCCCTCCCCCCTCGCCGCCCGCGGGCGCCCGCTCGGTGCGCGTGCTGCACGGCGAGAACTACACGCTGCAGTCGCGCCGGCGGCACCCCGTCACGCTGCGGGAGGACGAGCCGCCCGCGCCCGCCGACCCCGACTCCGACTCGGACTCGGAGCGCGACCGCCGCGTGCTCGAGCCCTGGCAGGGCGCCGGCGACGGGCCCGCCGCCGACTACGCGGTGGCGTGCGTGCGCGCCGAGCCCCCGCTGCACCTACCCTTCGCGCGCGTGCTGCCCGGCCGCCGCGCGCCCTCCCCGCCGCCGCCCTCCCCGCCGCCCGCGCCCGCGCCGCCGAGCCTCGAGGCGGACAACCTGGAGGCGGAGCCCATGGACCTGGAGCCGGAGCGGCGGCCCGCGCTGCAGGTGCGGGACCCGGCGGGCGTCCTGCGCCGCCGCCGGCTCGAGGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTGGTGGACGAGACGCGGGATGCGCTCGCGCGCCGGTGCATCGCGCTCTCCAACATCCTGCGCGGGCTCACCTTCGTGCCGGGCAACGAGGCGGAGTTCTCGCGGTCCGGCGCGTACCTGGCGCTCTGCGGCAAGCTGCTGCTGCTGCACCACGAGCACGCGCCGCGCGCCGCCCGCGCGCGCGCCTACGAGCGCGCCGCGCGCGACGAGGCGGACGCGGCCGCCTGCTGCTCCAGCCTGCGCGGCGCCGCCGAGTGGTGGTGGGACACGCTGGGCGCGCTGCGCGAGGACGCGCTCGTCTGCTGCGCCAACATCGCGGGCGGCCTGGAGCTGGCGCACCAGCCGGAGGCGGTGGCGCGGCCGCTGCTCGACGGGCTGCTGCACTGGGCGGTGTGCCCGGCGGCGGTGGCGGGCGACGCGCCGCCCGGCGCCGCCGCCTCCTCGCCACTGTCGCCGCGCCGCCTCGCGCTCGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCGAACGTGGACCTGGTGGTGGCCACGCCGCCGCGCGCGCGGCTGGCGCTGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCGGAGCGGCCGGTGGTGCGCGAGTTCGCGGTGAACCTGCTGCACTACCTGGCGGGCGCGGGCGCGGGCGCGGCGCGCGAGGTGGCGGCGCACGCGCCCGCCGTGGCCGCGCTCGTGGCCTTCATCGAGCGCGCGGAGCACGCGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGGCGCGCTGCGCGACAACCCGGACGCCATGGGCACCTCGCTGGACATGCTGCGCCGCGCGGCCGCCACGCTGCTGCGGCTCGCCGAGCGCCCCGAGAACCGCGCGCTCATCCGCCGCCACGAGCGGCGGCTGCTGTCGCTCGTCATGTCGCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTACCACTGCACGCAGCCGGACGAGCGCTAG
Protein Sequence
MGPPGAVGPGPGAGGDSAMPPPTAPGESHDNGPAAPATALVTTGPDGAPLDEGSSQQSTLSNASAASGDDTCASGSGKGSRKEYGSAAPSPSPGGASHSSMHDDYDAAPSPWPRPPSSPVFNSHIPPESFRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNNTTPAGSSNSQESFPGGGAAPGAPAMDGYPAQYAGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQPGYGYEYGSPYQANRPVYSQYGPDGDRGYRGGEYGAYGAYGGGYRAGAPPGTPPPAPYPEYYRAPHPHPAHPAPPPIQQHQPPIEVPHTHTLAHSTLTSILALLIYLDVPAHLRRRVMSGGQSPSVSLMSSQLARQLVAPLPNSPRPYVRTPRLYHALNTASHRLAIRSHNLTPARNYWSLAPADVILARTIYGGGKPAGPGGAAGGPGPGPGPGAGGAPRRHPDFAKGEPAYSPAAAGGAAPAARFPAGWGGFPRAQPPSPAAPWRPPPAQQPPAWTHHQYQPQVGGSGAGALKRELTFPAECVEGAVPSADKRRRLTKQDVAPVDAWRIVMALKSGLLAETCWALDILNILLFDDTCIGYFGLQHLPGLLDLLLEHFQRALADVFDAPAGDPEPWYAPSAAPRAPSPPRRRAPPPSPPAGARSVRVLHGENYTLQSRRRHPVTLREDEPPAPADPDSDSDSERDRRVLEPWQGAGDGPAADYAVACVRAEPPLHLPFARVLPGRRAPSPPPPSPPPAPAPPSLEADNLEAEPMDLEPERRPALQVRDPAGVLRRRRLEDYEDECYTRDEPSLNLVDETRDALARRCIALSNILRGLTFVPGNEAEFSRSGAYLALCGKLLLLHHEHAPRAARARAYERAARDEADAAACCSSLRGAAEWWWDTLGALREDALVCCANIAGGLELAHQPEAVARPLLDGLLHWAVCPAAVAGDAPPGAAASSPLSPRRLALEALCKLCVTDANVDLVVATPPRARLALLCAGLARDLCRPERPVVREFAVNLLHYLAGAGAGAAREVAAHAPAVAALVAFIERAEHAALGVANQHGVGALRDNPDAMGTSLDMLRRAAATLLRLAERPENRALIRRHERRLLSLVMSQILDQKVAHELADVLYHCTQPDER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00142874;
90% Identity
-
80% Identity
-