Basic Information

Gene Symbol
Xbp1
Assembly
GCA_905220475.1
Location
HG992027.1:14745473-14747499[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7 1.8e+03 -0.3 0.1 15 25 26 36 25 38 0.85
2 3 2.4e-17 2.5e-14 53.7 9.4 2 52 41 91 41 93 0.97
3 3 6.5e-05 0.066 13.9 0.8 33 55 86 108 85 113 0.91

Sequence Information

Coding Sequence
ATGAGTGCTCCAATAATTATCACGGTGCCGAAGAATTACCTCATGGAGGAGGATTCGGATGCAGGCGTGGATGCCTCGGCGGCGCCTTCCCGGAAGAGGAGACTGGACCATCTCTCATGGGAAGAAAAAATGCAAAGAAAGAAGCTGAAGAACCGCGTGGCGGCGCAGACTTCGCGAGATAGGAAGAAGGCGAAGATGGATGAAATGGAATACCGCATCAAGAACCTCGAGACCAAGAACGATAGACTCGTAAGCGAGGTGGAGAGCTTGAAGGCGCTCAACGAGCGTCTGCTGAGCGAGAACGCGTCGCTACGCAGCGAGGCCGCGGCGCGGACCGTCGCGGGAGCCCCCGGACCAGCAGAGTCCCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATCCGCGCGACGCGCCTGCTGCTAGCGATGTGTCTTCTCTCGCAGACCTCCTCGCCCAGTTCGACTCTGAAGAGTACCTCGATACCCTCCAACAACTTGCAAACTCCCTCCTCGAGGAAATTGATGCAAGTGCTGCAGGAGCGGCTAAAAATGACACAGTCGGGAACGCTGGAGAGTGCCCTAAAGCAGATAAAGTGGTGGGGACCGCAGCAGAGCACCTGGAATCCCATGAAGGTAGCGTCGTAG
Protein Sequence
MSAPIIITVPKNYLMEEDSDAGVDASAAPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEYRIKNLETKNDRLVSEVESLKALNERLLSENASLRSEAAARTVAGAPGPAESPQQKEGPPTAIRATRLLLAMCLLSQTSSPSSTLKSTSIPSNNLQTPSSRKLMQVLQERLKMTQSGTLESALKQIKWWGPQQSTWNPMKVAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00648852;
80% Identity
-