Basic Information

Gene Symbol
stc
Assembly
GCA_963580505.1
Location
OY756990.1:2836987-2851887[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.2 2.2e+03 -0.4 0.5 2 8 293 299 293 299 0.89
2 17 3 3.3e+04 -6.6 4.0 15 19 547 551 546 553 0.66
3 17 0.91 9.9e+03 -2.5 1.7 2 10 579 587 579 587 0.79
4 17 0.0013 14 6.6 18.9 4 19 595 610 593 610 0.93
5 17 3.3e-08 0.00036 21.3 14.6 1 19 646 664 646 664 0.97
6 17 3 3.3e+04 -5.7 4.2 12 18 675 683 670 684 0.81
7 17 9.8e-05 1.1 10.2 10.4 1 19 705 723 705 723 0.98
8 17 4.1e-05 0.44 11.4 12.3 1 19 764 786 764 786 0.88
9 17 0.046 5e+02 1.7 7.8 1 11 826 836 826 837 0.93
10 17 0.42 4.6e+03 -1.4 1.5 4 10 841 847 840 847 0.92
11 17 1e-07 0.0011 19.7 14.5 1 19 853 871 853 871 0.99
12 17 1e-07 0.0011 19.7 14.5 1 19 938 956 938 956 0.99
13 17 1e-07 0.0011 19.7 14.5 1 19 1023 1041 1023 1041 0.99
14 17 2.4 2.6e+04 -3.8 0.7 6 10 1138 1142 1137 1142 0.86
15 17 0.0031 34 5.4 12.3 10 18 1156 1164 1154 1165 0.94
16 17 8e-08 0.00087 20.1 13.7 1 17 1201 1219 1201 1225 0.85
17 17 0.0029 32 5.5 5.6 1 12 1231 1241 1231 1241 0.96

Sequence Information

Coding Sequence
ATGTCTCAGTGGAACAACTCTTACGTATACAACAATCAGTACCAAAGCCCCAACACCTGGAATGGTGAGGTGAATGGTCAGTACATGAACCAGGCTTATTATACTAGACCTGATGCAGGTGCACAGTATGTAAGCTTTAACGAGTTTCTCAATCAAATGCAATCCAACAATCCTGCGACAGGTAACACTGCTAACTATAACAACATACAATTTGAAAACTACCCAAACCACCAGTACAACTACCAGAATCTGTCATCTACATCCCAAACTCAGCTTAATAACTACAACTATACATCAGCACCCAGCAACATACCTAGTGAAGCAAACACCTATCCAGTAAGTGCACAAGCTCAGTACAATGCCCAGCCAGAATCTAGTTCTTACACCAGTGAGATGATATTAAATTCTAACCTTACACCGACAGCAACAGAGTTTGTGCCAAAATGTTCTACTTCACAACCTACAAATAGTAATCAGAATATTCCTGAACCTACAACCAGTCAAAATATTGCAAATGAACCTCAAACTAGCGTTAAGAAAAAAGTTGGAGGTAGTTCATCAGATAAAAACTGGAGGGAGCGGCCACAAAACTCAAAACCTACTAATGCAAAAGAGAAGCCAGCACTAAATGGATATTCATCTGCTGATGGTAAAGGCTTTACTAGCAATAACCAAAGCAAAGATACATATCAACGAAATAATGAGGGTAATGGTAAACAGTATGAGAATAATAGGAACCAAGATGCTGGCAATCAGGACTATGTATCTGAAGGTAGGAGTCACGAAATTAACACTCACAGTAACCAACCAAGTAGTAGAAACAGTGAACCTAGCAGTAGTAACCATGAATCTAATAAACGTAATTTTGAACCTCGTGGTCGCCACCAATGTGAATCCAACAGCAGGAACAATGAATCCAGCACCCGTAACCATGAATCCAATAGTCGAAACCAAGAGCCTAGTGGTCGGAATCAGGACACTAACAGTCGTAATTACGACAACAGTAGTCGCAATTCAAACAGTAGAAACTACGATTCAAATAATCGTAACCAAGAATATAGTAGAAACCAAGAGTTCAACAGCAGGAATCAAGACTCAAACTCCCGCTACTATGAATCAAACAACCGCAATGAAAGAAGAAACCAGGGAAAAggtaatacaaaatttaaaggCAAAGACTCTGACAACCGAACCTTCTACAACAGTTCAATGCCAAAGGAACAAGATAATAGAGGAGGAAGGGGTGAGGGTAGTGGGAGAAATAGAAACTGGACAGGAAGTCAGAGAATTCGAGGTTCGGAGCGCAACAGTGTAGAGGATGAACAGTACGCTAGCAGTTATATGCCTCAAAAAGAAGagagaatagaaagagacagagcTCCTAGGGCACAAAATGTTGCCAGTCCTGGTAGATTTCGAAACAAACAACATGGGGACCAAGTTTCAGTAAACAAAGAGATGACACAACGAGAACGACTAGCGGATCAGCTAGATAAAGGCACGCTGGAGTGCCTGGTGTGCTGCGACCGAGTTAAACAAATGGACCCTGTTTGGTCATGTAGCAACTGCTTCCATGTCTTACATCTCCGCTGTATACGGAAGTGGGCCATGAGCAGTATGATTGAGGGCAAATGGCGTTGCCCCGCTTGCCAGAATTGCAACGACTCTATCCCGACGGAGTACCGTTGCATGTGCGGCGCCGTGCGGTCGCCGGAGTACTCCCGCAGCGCGGGCGGCGCGCACACGTGCGGCGGCGCGTGCCGCAGACCGCGCGCGTGCCCGCATCCGTGCGCGCTGCAGTGCCATCCGGGGCCCTGCCCGCCTTGCCAGGCCACtgttaacaaACAATGCGGCTGTGGTGCGGAAACCCGTTCGGTGCTATGCAGCAGCAAATTGCCGCAGGTGTGTGGCCGAGTGTGCGAGAAGCAGCTCGAGTGTGGCTCGCATACTTGCACCAAGGAGTGTCATGAAGGACCCTGTGATACTTGCACTGAGTCCGTCGAACAAGTGTGCTACTGCCCGCGCGGCGAGTGCCGGTCCGTCCCGTGCACGGCGCAGTCGGGCGCGGAGCGCGCGTGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGGCGTGCCACGCGCCGCCGTGCGCGCCGTGCCGCCTGCGCGTCGCCGCCGTGCCCGCCTGCCCCTGCGGGAAGATGAAACTGGAAGCAGGCAGCCGCAAGTCGTGCACGGATCCGATCCCGTTGTGCGGCAACATCTGCGCCAAGCCGCTGCCGTGCGGCCCGGAGGGTGACCGACACTTCTGCAAGGTCGACTGCCATGAAGGCCCATGCCCGGCTTGTCCCGACAAGACGCTTGTGCAATGCCGCTGCGGACACTCGAGCCGTGAGATACCCTGCGTCGACCTGCCGGAGATGGCGGCCAATGTGCTGTGTCAGAAGAAGTGTAATAAGAAGCTTTCATGCGGCCGTCACCGCTGCCGCACGTCGTGCTGCGCCGCGACCACTCACCGCTGCGCCGTCACCTGCGGCCGCTCGCTCGCGTGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGCGTCTCATGCGGCACGCACCGCTGCGAGGACTTCTGTCACACCGGGCACTGCGCGCCCTGCCCGCGCCTCAGTACGTACCCCGCGGGTCTCATGCGGCACGCACCGCTGCGAGGACTTTGTCGAGGACTTGTTTCGTCGTGATTTGCGAGCATGATGCGGATTTCGAGCACTCGCATCCACTAGAAGTGTGTTTCACGGAGCTGAGCTGCGAGTGCGGCGCGCAAGTAGTCCTGCCGCCCGTGCGGTGCGGCGCGCGGCCGCCGGCGTGCGAGGCGCCGtgccgccgcgcgcgcgcctGCCGCCACCCGCCGCACCACCACTGCCACTCCGGCCCCTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGGTGCCACGGGGACCACGAGGAGCGAAAGACCATCCCATGTTCACAAGAGGAGTTCTCATGCGGGTTGCCGTGCGGCAAACCGCTGCCGTGCGGGAAACATACCTGCATCAAGACTTGCCACAAGGGACCATGCGATGCTGGcaaATGCACCCAACCGTGCGCGGAGAAGCGTCCGTCGTGTGGCCACCCGTGCGCCGCTCCCTGTCATTCCGCCGCGGAGACTGAAGCCGCTACCATCTGCCCTTCCACTGCACCATGTCGCAAGCTGGTTCGCGCCGTCTGTCTCTGTTCTCGTCGACATGCTGACCGTACTTGTAATGACAACGCGAGAGACTACGCCAAaaTGATGAGCGCCATGGCAGCTACAAGGATCCAAGAGGGTGGCTCCGTCGACCTCTCCGATATTCAGCGCCCCGGGAACATGCTCAAAACTCTGGATTGCGACGACGAATGTCGAGTAGAAGCGCGCACTCGATCCTTAGCGTTGGCGCTTCAAATAAGGAACCCCGACGTATCCGCCAAGCTAGCGCCGCGGTACAACGACACTCTCCGCGCATACGCAGCTAAGGACCCCGCCTTCGCAGATAGCATACACCAAGCGCTTACTGACCTCGTGCAGCGAGCCAAGAAGTCGAAACAGAAGACCCGTTCTCATTCGTTCCCGAGTATGAACTGGCAGAAGCGTCAGTTCATTCACGAGTTGTGCGAACATTTCGGCTGCGAGAGCGTCGCGTATGACGCTGAACCAAACCGGAATGTCGTCGCCACCGCTGACAGGGAAAAGTCGTGGCTGCCGGCGATGAGCGTGGCGGAGGTGGGCGCGCGCGAGGCGGGCCGGCGCCGCGTGCCGGGGCCCGTGctgcgcgcgccgcccgcgccgcgcgccgccagggACGCCAAGAAGCGTGACACGCGGGGCTTGGACGCCGAGTTTGCGAAGGAGGTGGAGATAATCCGCGAGTGGCTGGCTGGGCCCGAACGCCGGGAAGTTGACGTCAGGGTCGACCGCTTCGGCGGGGCGGTGCTGAGTGTGCGCGACCCTGCGATGACGAAGGCCAGTCGCCGCAGGAGGCGACGCAGGGGCCGAACGGATGAGCAGCGGTCGCCAGAGGAGCGGGCAGCTGAGAGCTGA
Protein Sequence
MSQWNNSYVYNNQYQSPNTWNGEVNGQYMNQAYYTRPDAGAQYVSFNEFLNQMQSNNPATGNTANYNNIQFENYPNHQYNYQNLSSTSQTQLNNYNYTSAPSNIPSEANTYPVSAQAQYNAQPESSSYTSEMILNSNLTPTATEFVPKCSTSQPTNSNQNIPEPTTSQNIANEPQTSVKKKVGGSSSDKNWRERPQNSKPTNAKEKPALNGYSSADGKGFTSNNQSKDTYQRNNEGNGKQYENNRNQDAGNQDYVSEGRSHEINTHSNQPSSRNSEPSSSNHESNKRNFEPRGRHQCESNSRNNESSTRNHESNSRNQEPSGRNQDTNSRNYDNSSRNSNSRNYDSNNRNQEYSRNQEFNSRNQDSNSRYYESNNRNERRNQGKGNTKFKGKDSDNRTFYNSSMPKEQDNRGGRGEGSGRNRNWTGSQRIRGSERNSVEDEQYASSYMPQKEERIERDRAPRAQNVASPGRFRNKQHGDQVSVNKEMTQRERLADQLDKGTLECLVCCDRVKQMDPVWSCSNCFHVLHLRCIRKWAMSSMIEGKWRCPACQNCNDSIPTEYRCMCGAVRSPEYSRSAGGAHTCGGACRRPRACPHPCALQCHPGPCPPCQATVNKQCGCGAETRSVLCSSKLPQVCGRVCEKQLECGSHTCTKECHEGPCDTCTESVEQVCYCPRGECRSVPCTAQSGAERAWSCGAACARVLACGAHVCRAACHAPPCAPCRLRVAAVPACPCGKMKLEAGSRKSCTDPIPLCGNICAKPLPCGPEGDRHFCKVDCHEGPCPACPDKTLVQCRCGHSSREIPCVDLPEMAANVLCQKKCNKKLSCGRHRCRTSCCAATTHRCAVTCGRSLACGTHRCEDFCHTGHCAPCPRLSTYPARLMRHAPLRGLLSHRALRALPAPQYVPRASHAARTAARTSVTPGTARPARASVRTPRVSCGTHRCEDFCHTGHCAPCPRLSTYPARLMRHAPLRGLLSHRALRALPAPQYVPRASHAARTAARTSVTPGTARPARASVRTPRVSCGTHRCEDFCHTGHCAPCPRLSTYPARLMRHAPLRGLLSHRALRALPAPQYVPRGSHAARTAARTLSRTCFVVICEHDADFEHSHPLEVCFTELSCECGAQVVLPPVRCGARPPACEAPCRRARACRHPPHHHCHSGPCPPCVVLTTKRCHGDHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDAGKCTQPCAEKRPSCGHPCAAPCHSAAETEAATICPSTAPCRKLVRAVCLCSRRHADRTCNDNARDYAKMMSAMAATRIQEGGSVDLSDIQRPGNMLKTLDCDDECRVEARTRSLALALQIRNPDVSAKLAPRYNDTLRAYAAKDPAFADSIHQALTDLVQRAKKSKQKTRSHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVAEVGAREAGRRRVPGPVLRAPPAPRAARDAKKRDTRGLDAEFAKEVEIIREWLAGPERREVDVRVDRFGGAVLSVRDPAMTKASRRRRRRRGRTDEQRSPEERAAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-