Basic Information

Gene Symbol
pnr
Assembly
GCA_963580505.1
Location
OY756978.1:168349-172324[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-18 4.6e-15 55.8 7.5 1 35 32 65 32 66 0.97

Sequence Information

Coding Sequence
ATGCCTTCTTTCAACACCGCTAGCCTTTTAGATCCGACTGCTTTGGcattgagaccctggCCGACGAACGGCAACCGTCGTGTGGGAGTGACGTGTGCCAACTGTCGCACGTCCAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCCTGTGGTCTCTACTATAAGCTGCATAACGTGAACCGTCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAGCCCAAGAGCATGGGCGGCGGGCACGGCGGCGGCCCGCGCGCCGGACCTGCCTCGCTCTCCGTGGAGGCACACTCGCACAAGGTGCTGCCTCCGCTGTACGCCGCGGTGGAGGgcgcgggagcgggagcggtaGCGGGGGCGGGAGCGGGTGCGGGCGTGCTGCTGCTGCCCGCGCGACACCAAGCCGATATGTTATCAACGCTAGAGAGGAGCGCGGTGTCGGTGTCGACGCCCTCGCACTACCGCCCGCCCTAG
Protein Sequence
MPSFNTASLLDPTALALRPWPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGGPRAGPASLSVEAHSHKVLPPLYAAVEGAGAGAVAGAGAGAGVLLLPARHQADMLSTLERSAVSVSTPSHYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01153527;
90% Identity
-
80% Identity
-