Eero016976.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY756992.1:13223214-13229104[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0022 0.2 13.0 2.7 1 23 314 337 314 337 0.96 2 12 0.0029 0.27 12.6 1.2 1 19 350 368 350 372 0.93 3 12 0.00032 0.029 15.7 1.1 2 23 378 399 377 399 0.96 4 12 0.00014 0.013 16.7 0.2 1 23 403 426 403 426 0.97 5 12 0.064 5.9 8.4 2.1 1 23 429 453 429 453 0.97 6 12 8.9e-05 0.0082 17.4 0.2 2 23 530 551 529 551 0.95 7 12 0.1 9.5 7.7 0.2 3 23 572 593 570 593 0.95 8 12 1e-06 9.4e-05 23.5 4.1 1 23 599 621 599 621 0.98 9 12 0.0036 0.33 12.3 1.6 2 23 627 648 626 648 0.96 10 12 0.019 1.7 10.0 5.0 2 21 655 674 654 677 0.94 11 12 5 4.5e+02 2.4 0.7 1 19 685 703 685 704 0.86 12 12 0.0065 0.6 11.5 1.1 3 19 717 733 716 738 0.94
Sequence Information
- Coding Sequence
- ATGGATCAGAACAATGTCGTCTTGGATTCTGAGATGGTCTATCCTATGCTATTTATCCCGAAAAAGTGCACATCACTGGAAACCAACTGTGAGATGACTGATAATGTATATATTGACCTGAACATAACATCTCCTGACACGGAAGGTAACGAAACTCGCATATATTCAGGATTTTGTATTGTGAAGCTTGTTGATTCCTATGACGTCAATCTAAATAGTGTGGAGACTCCTAATATAGGCCACTCTGGTTCATCAGCAGATAGCTATGACATAGGTCAGATGCCTGTCATCTTGGCTGAAGCCAATCACATGTCCTTCCCTACTGACAATCAGTCACAGGTATGGATAGATCCTTCTAGAAGTCCATATGTGTACAATCACTATGATTCAGCATCAAAAGAGAGATATGCCATCCGAGAATCTCGTGGCTGCATTACTGTTGAGCAACACAACACATACATCACTCAAAATGTTTACAACTATAACGATTCTAACGTATACAACTACAGAGAGCCTCCAATGCCCCCCCTTCAGCAAGTAAACAACAATTTTGAACATAAGAAATTTCGAAAGGTATCAGAAACTGTAAATCAGCAAGATTCTGGTGCAAATTTATATGAAGATGATGAAATTGAATGTGGAGAGTTTCTATCTCAACTGcctgaagaaataattaataagaaGGAAAGCCAGGTTCAGGAGGGCAAGTATGTTGATCTTCAAAGTAAGAACAATGCTCTAAAACAGCTGATGTCGAAGGATATACAGTCGGTGTCGAAGCAAAGGAAGACTATACTGTTCCTGGGTCATGACTCGGACTCGGGGAGGACAATCCAGAATATATCATACAATGATCCGATGGTAACCTGTGGGGGGTTGGAAGTGGATAATGAAGTTGTCATTGAAAACTCTTCATCTCCAAAACCAAAAAAGAAGAAATACCAATGTGACAAATGTAAGCAGATATTTGAGCACATATATGCATTCCGTCAGCACATGGTCAGAAACCACAACTTCAATATCCACCCTAATGACCAGGATATCAGCTATGTGTGCTCTGAATGTGGGAAGAACTTGAGAACCCAACGCAAGCTCGAGATACACTGCCTTGGTCACGGTGACCCGGAGTTGGAATGCTCTAAGTGCTACAAAGTGTACGCTTCAAAATTCACTCTACGTGCACACAAGAAGATCCACAATCGCAAGTTTCCTTGCGCATACTGTGTTAGGTCTTATGTGACTTCCGAAGACCTAAAGTCACATCTTCAGAAAATTCACATACTTTTCACGTGTCAGTATTCAGACTGTTCGTATGTGACTGATAAAGCTATAGATCTgaataaacatcataataagCATAATAAAGAGCCTAGTGAAGCTGACTATGATTCTTTTTTGGAGGATGTAAGCGAGAAGGAAGATGAGATGGATGAAGAAGTTGATTTGAAGACGGAGGAGTTTCAGGAATATGCAAAAATTGAAGGAGACAGGATTAAGCAGGCTGATTCGGTGATAGCAAAAGTGATGTCAAACAAGATATTTCTGCTGAATTCCAAGAAGGCTAAAAAGCATGGGCGATGCcataagAGTTGCGAAGTGTGTTACAAAGCCTTCGCCCGGATCAGCGACCTGAAGCGGCACCTGATTGAGCACGTCATCAGGTCCACACTGGCCAAGTCTCCCACCACCAAGGATGGAACACTCAACATTATTTGCGAGATCTGCCAAACCGAGACATTCTCCAAGGTGGACAAGTACAAAGCTCACCTCCGCGAGCATGCCAAACTGACTCTATACAAATGCACCTTTTGCGACAAATCCTTCAGCGATTCCTCTAACTTCTCCAAACATAAGAAAATCCATGGCGTTTCTTACCTCCAATGCGACTTGTGCCAACGTAAATTCAACTCTAAGAAAATGATCTCACAGCATATGGAGTATCACAATAAGAACCAGCCTGTCAAGTGTAGATACTGCAGCAGAGTGTTCCACTTTCAATCGATGCTTAACAAGCATCTAAAGTGCGTTCATACTAAACACGCCTCGATGAGGTTCAGATGCAGATTCTGCGATGTCCTCTTCAAGACTCTGAAGGACAAGTGGGATCATGAATGGAAGTTCCATAACATCAGGAAGATAATAGTGGACTGTTTAATCTGTGGGGCCAAGTTTAGGAAGTATTCCGAACTGAAAAGGCATTGCATTGATATACATGAAATGAGTATTCCACCGGCGAAGAAGTTTTTGAagaaaaagttttattga
- Protein Sequence
- MDQNNVVLDSEMVYPMLFIPKKCTSLETNCEMTDNVYIDLNITSPDTEGNETRIYSGFCIVKLVDSYDVNLNSVETPNIGHSGSSADSYDIGQMPVILAEANHMSFPTDNQSQVWIDPSRSPYVYNHYDSASKERYAIRESRGCITVEQHNTYITQNVYNYNDSNVYNYREPPMPPLQQVNNNFEHKKFRKVSETVNQQDSGANLYEDDEIECGEFLSQLPEEIINKKESQVQEGKYVDLQSKNNALKQLMSKDIQSVSKQRKTILFLGHDSDSGRTIQNISYNDPMVTCGGLEVDNEVVIENSSSPKPKKKKYQCDKCKQIFEHIYAFRQHMVRNHNFNIHPNDQDISYVCSECGKNLRTQRKLEIHCLGHGDPELECSKCYKVYASKFTLRAHKKIHNRKFPCAYCVRSYVTSEDLKSHLQKIHILFTCQYSDCSYVTDKAIDLNKHHNKHNKEPSEADYDSFLEDVSEKEDEMDEEVDLKTEEFQEYAKIEGDRIKQADSVIAKVMSNKIFLLNSKKAKKHGRCHKSCEVCYKAFARISDLKRHLIEHVIRSTLAKSPTTKDGTLNIICEICQTETFSKVDKYKAHLREHAKLTLYKCTFCDKSFSDSSNFSKHKKIHGVSYLQCDLCQRKFNSKKMISQHMEYHNKNQPVKCRYCSRVFHFQSMLNKHLKCVHTKHASMRFRCRFCDVLFKTLKDKWDHEWKFHNIRKIIVDCLICGAKFRKYSELKRHCIDIHEMSIPPAKKFLKKKFY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00650346;
- 90% Identity
- -
- 80% Identity
- -