Basic Information

Gene Symbol
Tf2-12
Assembly
GCA_963580505.1
Location
OY757005.1:7829803-7837726[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0014 0.12 13.7 0.1 1 20 111 130 111 132 0.94
2 21 0.0045 0.41 12.0 2.9 2 21 245 264 244 265 0.93
3 21 2.1 1.9e+02 3.6 0.2 3 23 271 291 270 291 0.93
4 21 3.3 3.1e+02 3.0 0.7 3 23 298 319 296 319 0.94
5 21 0.00051 0.047 15.0 0.5 2 23 325 346 324 346 0.96
6 21 0.58 53 5.4 3.0 6 21 353 368 351 369 0.93
7 21 0.0088 0.8 11.1 0.7 1 23 382 405 382 405 0.93
8 21 5.8e-05 0.0053 18.0 1.6 1 23 411 433 411 433 0.97
9 21 0.11 9.7 7.7 2.7 5 23 443 461 441 461 0.96
10 21 1.5 1.4e+02 4.1 0.5 1 23 467 490 467 490 0.86
11 21 0.019 1.7 10.1 0.1 3 20 500 517 500 519 0.94
12 21 0.00037 0.034 15.4 1.0 2 21 626 645 625 646 0.93
13 21 2.7 2.4e+02 3.3 0.0 3 23 653 674 651 674 0.90
14 21 1.9 1.7e+02 3.8 0.1 2 23 680 702 679 702 0.94
15 21 4.1e-06 0.00038 21.6 3.5 1 23 707 729 707 729 0.98
16 21 2.9 2.7e+02 3.2 3.5 2 20 733 751 733 753 0.93
17 21 3.7e-05 0.0034 18.6 0.5 1 23 779 802 779 802 0.95
18 21 0.0052 0.48 11.8 0.2 1 23 808 830 808 830 0.89
19 21 0.18 16 7.0 0.1 1 23 836 858 836 858 0.97
20 21 0.049 4.5 8.8 0.6 1 23 864 887 864 887 0.94
21 21 0.00048 0.044 15.1 0.1 2 23 894 916 893 916 0.94

Sequence Information

Coding Sequence
ATGGAAATCTCACCGGACCTGCCCCAATGGCTATGCCAACCCTGCTCCTCTACTTTCACGGACTTTCTACCTTTCTGGAAGCTTTGCCGAGACTCTGTCCGTAAATGGAATCAAGTTACTAATCATTTAGAGACAATATCTGTTCATAAAAAAGCTACTACAGCTTATGTTCTTCTAACGGACAAGCCTATAACTGTAGCGGACAGAAGCAATAGAAACAAAACTCCTAAAGAAGCGCTGCGGAACATGAAACTTCGTCTCAGCTGCTTGCGCTATACAAAGGAATGCAAAAATAAGAGACTAAAGAAAATAGCCAAGGCCAAAAAGAAATTCGCATGTCCAGAATGCGGAAAAGCTTTTGAATACGTGCGCAAATTCAATAAGCATATAATCAACGTTAGAAAGCAATGCTGCAAGTATTGTCACTTAGTTGTAGAGGAGGATGCAACACTGCCCGCGTGCCTTTGTCACCGTTGCTCCGAAGCCGCTATTAGTGCAGCAGCCTTCAAGAAACTTTGCCATCAATCTGCACAGTGCTGGGATGAGGCCACCATTTTTTTAACAACCACACCCAGTCCTACAAGCTTCGTTAAGACATTTTTCATGTTTTGCAACAAAGAGGGAGGTACATTCAACAGTCCGGATGCAGTGACCACATTAGAAAATGCTGTGACGGTCCTGAATGAACcgaaaaacaagaaaaagaagaaggaaAGGAAGCGCCAATATTGTGTTTGTCAGCATTGCAGCAAGCGTTTTAGTGCTCTAGTAAATCTGAACCGGCATCTGAAATATATGCAAGAGAGATTATGTTATGAATGCAGCATCGTTGTCAACAAAAAGGATCTGGCGAAGCATTTGTTGGTCAAACATAATAAAGAGGTTATAGACTGCAGTAGCTGCCATGAGCTTTTCGAGAATTCCACGGAAGCCCAGTCGCATTGGCTTAAATACCACGGCGCGAATACTAAACCATGTAATATTTGCGGACGCGGATTTCCAAACGAACGTGGTCTTAGAGCCCATTACTGCCTGCACACCCTCCGCCACTGCTCATGTGGTAAAAGCTTTGAGAACAGTCGATGTTATAAACACCATATAACCAAATGCAAACCAGAAAAGCATAAGTCGGTTGACTCGATCTTCGAATGCGGTCATTGTGGACTACAATACGACAAAAAACCATCTTTACGTGTTCACATAGTCCAAAAACATCTGAACGTGCTTCCGTTCGTGTGCCAAACATGCGGGAAGCGAACTTCCACACTTTCTCATTTAAGGGTTCACGAGAATATTCATGAGAAAGAGCGAAAGGTGTTAAAATGTCATTGCGGGGCTAAGTTTCGCTCCAAATTGGGGTACAAGCTTCACATGAGAATCCATTCAGGGGATACACCTTACAAATGCGAATTATGCGAAGAAAGCTTCCTCTCTGCGTCTCGGAGGTTAGACCACGTGAAGAGGCGGCACCAGAGTTCCAGAGAGATGTCACACGGCTGCGAATCTTGCGGAGCAAAGTTTATAAGACCGTGGGAGCTGAAGAAACATTATCTGAACATAGAGGAAGCTACTGAATGCCCCTCGGGAGTTTGCGTGACGTGCGCAAGCGCTGCCCTCGCTGCGCAAGAGTTCCGCATATTAGTCAGGAACTCTGAGAAACTGTGGCTCAACGCTGCCACAAACTTGACAAGTTTGCAGTACGACGATGAGAAAGAGCAAGCCAGGTCGATCTGCGCGTTCGTCACAGAAAATGATCTAGACATACAGACCAGTAAGGATTACATTGGTGGTGAACCTAAAACCGTCGTCAACCGATTAAAAAGAAAAGCGAGGACCACACGGAAACCTAGACTCGTCCGACCTGGCCCGACAACCAAATGCCCAGATTgcaataaaatcttctccagTCCCTATTACCTGCACGATCATTTCAAAAATAACGGCCAGAAGGATGCTTGTCAAATTTGCGGAACTGTCACAGTCCGGGGACTTGCGATGTGGGATCACATGATATACGCACACAAAGAAAACCCGTCAATGTGTCAGCAGTGTCCTGCAGTATTCCTTAAAGAAAACGACCTGGTTAATCACCGGAACGTAGCGCACAAACCTGGGGTTTACACTTGTACAGAATGCGGCAGATCGTTCCCAAGAAAGTCAACGTTTGAGCATCACACTCAAATGCACTTGGTTAGAACGTGTCGCAGCTGCAACTTACAGTTCACAAATAGAAGCTGCTACAGAGAACATAGAACCCAATGCGAACCTAACGCAAAGCTTGACAGCAAGTCTGTACCCCGTAACCGACGGTCGAACATCCGAGACCCAGCAGTTTTTATATGCGATTACTGCAACAAAAAATATAGCTCGCGACCTCAGTTGAAGAATCATATACTGTGGATTCACATGGATGTTAGGCCTTATCAATGCCAATGGTGTGGAAAGAGGTTTTACACTCCCGCAAGGATGGCGGAGCACTCCGTAGTGCATACCCGCGCGCGAAATTTCGAATGTGACATTTGTGGCGCGAAATTAGTTTCCAAAATGGCGGCTGTTTACCATAGACGACGGCATACGGGCGAGAAACCGTACAAGTGCGACGATTGCCAGGCTACGTTTATTTCCGCATCTCGTAGGTTGGAGCACGCTAAACGGAAGCATAATAAAGGCACTAGGATTCCATGTCCTCTTTGCTCGGCCACCTTTGTTCGGAAAGCTGAACTCAAAAAGCATGTAGATAAAGCTCATAGTACAGAAGGGAGCTACACCACACCCATACTGGTGATCCCTTTACTGGTGACCCCGACGTGTCGAAACCAACGCCTGATTGACAACACTACAAGCCTTACGTCCCCTGCTTCACCTGCGCAGTCAACTGGGAACATTTCATCAGTGAAAGTCATTTCTGGAGATTCCGTATATCATAACATACTAAGTGAATACCCTGAGATTACTCGACCTTCCGGTGTCCATCGTGTTCCGAAGCATAACACCATGCATCACATACAGACTACTGCAGGGCCGCCAATAAGCAGCACACCGCGGAGACTAGCACCGGATAAGTTAAAGATAGCAAAAGACGAGTTTGCAGACATGCTGAGGAACGGAACAGCCAGACCTTCCAAATCACCTTGGTCATCACCACTTCATCTTGCGCCTAAGAAAGATAATGGGTGGCGTCCGTGCGGTGACTACAGAATGCTCAACGCTAGAACCGTACCCGACCGCTATCCCATTCGACACATTCATGACTTCGCGCATTGTCTCTCCGGCTGTCAGGTATACTCTGTCATTGATCTTGTCAAAGCTTACAACCAAATTCCAGTCTGCCCTGAGGATATTCCAAAGACCGCAATCACAACGCCGTTCGGCTTATACGAATTTCCGTTCATGACGTTCGGACTACGTAACGCCGGACAAACGTTTCAACGATTTGTGGACGAGATGCTCAGGGGCCTTGAGGAGTTCTGTTTTCCATTTCTTGACGATTTCCTGATTTTTTCACCTGATGAGGAGTCACACAAGAAGCATCTTCATCTGCTCTTCAACAGACTCAAGGAATACGGCATGGTAATCAACACTAACAAGTGCATATTCGGTGTATCGGAGATAACGTTTTTAGGACACAGCATCTCAGCAGCTGGCACTAAACCATTATCATCAAAGGTAGAAGCAGTTGCGAACTTTCCACCACCGAAAACTGTGAGAGAATTGCGAAGATTTCTTGGAATGGTGAACTTTTACAGAAGGTTCATTCCTGACGCAGCGCGGTACCAAGCTCCTCTGAATGCACTGCTCACGGGATCAGTTAAAGGTTCACACCCCGTGCATTTATCTGAAGAAGCTACGAAAGCATTCACCGACTGCAAAGAAAGTCTCTGCCAAGCAGCACTACTCGCTCATCCAGACTGTCAAGCGAAGCTCGCCATAGTCACCGACGCTTCAGACACGGCAATGGGCGCAGCTTTACAACAGCATAGAGACGGTCAGTGGGAACCTTTGGCATTTTTCTCTCGGAAGCTTTCGCCATGCCAGCAGAAATACTCGCCATATGACAGAGAACTTCTCGCTATCTACGAAGCTATAAAATACTTTCGTCACATGGTAGAAGCGAGAGATTTCATCATATACACGGATCACAAGCCCATTACTTTCGCATttcattcacgaaaagaaaattgCTCACCAAGACAGTTTAGACATCTGGATTTCATTTCACAATTTTCGACAGACATCAGGCATATATCAGGAAAGGACAACGTTGTGGCTGATAGTTTATCACGCATCGAAGAGATTACTCAGCCCATCGATTTATCCAACCTTGCTCAAGCACAAAGCACAGATCCTGAGTTACAACAACTTTTGGAGAGCAATACTTCACTGCGCTTGACTAAAATCAAACTGCCTGGATCTCACACTGAAATTTACTGTGACAAAAGCAGCAATGTGGCCAGACCATACGTGACCAAAGACATGCGACGGCAAGTGTTCGAAAACTTGCATTCTTTCAGCCATCCTGGCACAAATGCGACGACGAAGTTAATATCGGAACGCTACGTATGGCCTAGTATGCGCAAAGACTGCAGAGAGTGGACTCGTTCCTGCCTAGCATGCCAACGATCGAAAATTATACGTCATGTCTCATCTCCATTAGCTTCATTCAACTTACCTCGAGCCAGATTCATGAAAATCCACATAGATTTGATCGGACCTTTGCCAATCTCGCAAGGGTACCGCTACTGTCTCACATGTGTTGATCGCTTTACACGATGGCCCGAGGCTATACCATTACAGGAGATAACAGCTGAAACAGTGGCAAAAGCTTTAGTACACGGATGGATATCCAGATTCGGCTGCCCTGAAGACATTGTCACTGATCGTGGTCGACAGTTTGAATCAGAACTTTTCAAGCATCTGTCCCACATTATCGGATTTCAACGCAGACGAACTACAGCCTATCATCCGGCGTGCAATGGTCTCGTAGAAAGATTCCACAGACAGCTCAAAGCCGCCATTACATGCCATGCGACCAGCAGCTGGCTAGAAACACTTCCACTCGTACTACTGGGTATCCGGGCGGCGTTTAAGGAAGACCTACAAGCCACTCCAGCTGAGCTCGTATACGGAGAAACGCTACGACTCCCAGGTGACATTTTTTGTCAACAGGCTGATGGCACAGAGGACTTGACAGTATACACTGACAGACTGCGCACATTCGCCAAGAATTTGTTGCCATCACCAACATCACGCCATGGGAATAATCGTTCCATCTTCATCTTCAAAGATTTGGCAACAGCATCCCACGTTTTTCTACGAGATGACACTTCTCACCCATCATTTCAAGCAGCTTACACAGGCCCGCATGAGGTGGTAAAACGGGGGGATAAAGTTTTCAAGCTCCGCATAAAAGGCAAGGAAGTCACGGTATCAGTGGACCGCATCAAACCTGCCTACATACTTCGTGAGTCGGACCATTCGCCAGCAGCGGCAGCAGCAGAACCTGAGACTCGAGACGCTCCAGTGACCACCACTCGATCAGGACGAATAGTCCGCTTTCCTGAGAGGTATTAA
Protein Sequence
MEISPDLPQWLCQPCSSTFTDFLPFWKLCRDSVRKWNQVTNHLETISVHKKATTAYVLLTDKPITVADRSNRNKTPKEALRNMKLRLSCLRYTKECKNKRLKKIAKAKKKFACPECGKAFEYVRKFNKHIINVRKQCCKYCHLVVEEDATLPACLCHRCSEAAISAAAFKKLCHQSAQCWDEATIFLTTTPSPTSFVKTFFMFCNKEGGTFNSPDAVTTLENAVTVLNEPKNKKKKKERKRQYCVCQHCSKRFSALVNLNRHLKYMQERLCYECSIVVNKKDLAKHLLVKHNKEVIDCSSCHELFENSTEAQSHWLKYHGANTKPCNICGRGFPNERGLRAHYCLHTLRHCSCGKSFENSRCYKHHITKCKPEKHKSVDSIFECGHCGLQYDKKPSLRVHIVQKHLNVLPFVCQTCGKRTSTLSHLRVHENIHEKERKVLKCHCGAKFRSKLGYKLHMRIHSGDTPYKCELCEESFLSASRRLDHVKRRHQSSREMSHGCESCGAKFIRPWELKKHYLNIEEATECPSGVCVTCASAALAAQEFRILVRNSEKLWLNAATNLTSLQYDDEKEQARSICAFVTENDLDIQTSKDYIGGEPKTVVNRLKRKARTTRKPRLVRPGPTTKCPDCNKIFSSPYYLHDHFKNNGQKDACQICGTVTVRGLAMWDHMIYAHKENPSMCQQCPAVFLKENDLVNHRNVAHKPGVYTCTECGRSFPRKSTFEHHTQMHLVRTCRSCNLQFTNRSCYREHRTQCEPNAKLDSKSVPRNRRSNIRDPAVFICDYCNKKYSSRPQLKNHILWIHMDVRPYQCQWCGKRFYTPARMAEHSVVHTRARNFECDICGAKLVSKMAAVYHRRRHTGEKPYKCDDCQATFISASRRLEHAKRKHNKGTRIPCPLCSATFVRKAELKKHVDKAHSTEGSYTTPILVIPLLVTPTCRNQRLIDNTTSLTSPASPAQSTGNISSVKVISGDSVYHNILSEYPEITRPSGVHRVPKHNTMHHIQTTAGPPISSTPRRLAPDKLKIAKDEFADMLRNGTARPSKSPWSSPLHLAPKKDNGWRPCGDYRMLNARTVPDRYPIRHIHDFAHCLSGCQVYSVIDLVKAYNQIPVCPEDIPKTAITTPFGLYEFPFMTFGLRNAGQTFQRFVDEMLRGLEEFCFPFLDDFLIFSPDEESHKKHLHLLFNRLKEYGMVINTNKCIFGVSEITFLGHSISAAGTKPLSSKVEAVANFPPPKTVRELRRFLGMVNFYRRFIPDAARYQAPLNALLTGSVKGSHPVHLSEEATKAFTDCKESLCQAALLAHPDCQAKLAIVTDASDTAMGAALQQHRDGQWEPLAFFSRKLSPCQQKYSPYDRELLAIYEAIKYFRHMVEARDFIIYTDHKPITFAFHSRKENCSPRQFRHLDFISQFSTDIRHISGKDNVVADSLSRIEEITQPIDLSNLAQAQSTDPELQQLLESNTSLRLTKIKLPGSHTEIYCDKSSNVARPYVTKDMRRQVFENLHSFSHPGTNATTKLISERYVWPSMRKDCREWTRSCLACQRSKIIRHVSSPLASFNLPRARFMKIHIDLIGPLPISQGYRYCLTCVDRFTRWPEAIPLQEITAETVAKALVHGWISRFGCPEDIVTDRGRQFESELFKHLSHIIGFQRRRTTAYHPACNGLVERFHRQLKAAITCHATSSWLETLPLVLLGIRAAFKEDLQATPAELVYGETLRLPGDIFCQQADGTEDLTVYTDRLRTFAKNLLPSPTSRHGNNRSIFIFKDLATASHVFLRDDTSHPSFQAAYTGPHEVVKRGDKVFKLRIKGKEVTVSVDRIKPAYILRESDHSPAAAAAEPETRDAPVTTTRSGRIVRFPERY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-