Eero014003.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY756989.1:8801331-8824505[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00045 0.041 15.2 0.2 2 23 141 162 140 162 0.93 2 10 0.00065 0.059 14.7 2.4 1 23 168 190 168 190 0.96 3 10 7.2e-05 0.0066 17.7 0.5 1 23 284 306 284 306 0.98 4 10 0.00056 0.051 14.9 0.0 3 23 393 414 391 414 0.90 5 10 0.035 3.2 9.2 0.0 2 23 422 443 422 443 0.92 6 10 2.8e-06 0.00026 22.1 0.2 1 23 470 492 470 492 0.98 7 10 0.00069 0.063 14.6 0.2 1 23 498 520 498 520 0.97 8 10 0.00039 0.036 15.4 0.3 1 23 526 548 526 549 0.95 9 10 0.0032 0.3 12.5 0.1 1 23 562 584 562 584 0.96 10 10 0.011 1 10.8 0.0 1 20 766 785 766 788 0.94
Sequence Information
- Coding Sequence
- ATGGATGGAGACAGAGAATTCAACCTACACTGGGGTGGGGAAGTGGTGGTTAAACATGGCCCTGGGACTGTTACAAATGAAGTCATATGTGGTCTAGATAATGTTCATAATTCATCATTTTCCAATATGACTTCTGAAGAAATGATAGCGGAAACAGATCAAATGGCAGCTGAGAATCTTATGTTCCTGTCTCAGGATGTGGTTGGGTACACGGAAACAGCTGAGCTCGCCGATGATCCTAATGTGGAGTGTGTCACTGAAGAAGTCATCACGGATGACTGGGTTATGTCTGGGGGGCAAGATAGAGTGGAAGTACCAATGGACCATTTAAGTCATCCTGTGTTAGACCTAAAAGAAGAAAATGATATTGATGTTCCATTACCTACAGATCAAGATGAGTACACAGCGATGCGTCCGTGGCCGTGCGACTTCTGTTCCCGCCGGTTCCGCAAGAAGGCAGCGTTGATGAACCACATGGTGGCGCACCAGAACGACCGCCCGCACGCGTGCAATCTTTGTGGCGTGCGGTACGTACGCAAGTGCGACCTCATGAACCATCTCAAGGTGCACGCGTACGTGCCGGACGATGCAGATGAACAGGATATTGAGGACCTGCTAGTAAACAACCAAATCGTGAAACCAAAGAAGAAGCGCGGACGGCGGAAAAAGAATCCAGAACCAGaggagCGCGACGCGTGGCAGAACATGCGGTCGGCGCGCACGCAGCAGTGGTCGCGGCGCGCGCGCtccccgcccgccgcgccgcgctccCCGCCGCCCGCGaccccgcccccgcccgcgcccgcgcccgcgaccCCGCCCCCGCCGCCCGCCGACCCCGCGCGCCCCTTCGTGTGCCGACACTGCGGGGTCGCCTTCGCTAGGGAGAAGGCGCTGCAGTCGCATTCTAGGGTGCACGGCGGTGATTCCCCTGTAGATTGCGGTGAATGTGGCGAGTTATGTTGGTCGAGAGATGCGCTGGCGCAACACGCAGCGCAGCGGCATCCGAACCGGCCGCCCCAATCCACCGTCGACGCTTACAATGACTCCGACTCGGGAGACGACATGGATTTCCGTCTCTCCCCGGAGTCAACACCAAGCGTCGACCACGACCGCGACCGCGACCGCGATCGTGAACGTCCAGTGTTTGACACGATGAAAGGTCCAGAACTCTTCTGCTCAGACTGTGGCGTCGCATTCCAAAGGGCTGACCTACTTAGAAGACACGTTGCGGCTGCTCATAGCCACGGTCGCGGCGCGGCGTCGTGCGAGGAGTGCGGCGAGGGGTTCGGCGACGCGCTGCAGCTGCTCGCGCACGCGGAGGGACACGCGCACCGCATAGCGCCCAGgACAAAAAGATTTTCTAGAAGTCGAAATAGCACGTCAATATCAAGTAATTCGCGTCAATTTCCATGTAAAGAATGCGGTAAGGTGTTTGGGTCGCGTAGCTCCCAGCAGATTCACATCCGCATCCATACCGGCGAGCGACCTTATGCGTGCCGGTTCTGTTGGAAGGCGTTTGCTGACGGTGGCACTCTACGAAAGCATGAGAGAATACACACAGGCGAGAAGCCGTACGCGTGCGCGGTGTGTCCGCGCGCCTTCAACCAGCGCGTCGTGCTGCGGGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCCAACGGCGGTCCCGCGTATTGCTGCGTAGTTTGCGGACGCGCACTCTCTTCTAGCCCAGACCTAGTGCAGCATCTCATACAACATTGTGATGCTAACACCGCCTTGAAACGACAACCGCAGACCGGTCCCCGCAAGTACAAGCGCAGAAGGAAGATGAAGAGCGACGTGTCTCCGGTGCGGCGCGAGTGGCGCTCTCCGTCTCCCTCGCTCCCGCGCGAGTCCCCGTCCCCCAGCCCGCCGCGCTCCCCCTCCCCCCcgcccgcgcgccgccgccgcgcccgcgccccgcgccccccgcgcccccgcaTGATACACACCGAGGGACCCCGGACCAAGCAGCTCCGCGGCCGGCGCCCGCCGCGGCACCCGGCGGACGACCTCCGCGCCATCGGGCCGCACTCACCCTCGCCTTCGCCGAGGCGAGAGCTCCAACTGTCGCCGGACCGTGACCTCGAACTTTCTCCGAACCGTGACCTTGAACTCTCACCAAAATGTGACCTCGAACTAACACCAAAGCGGAACTTCAAGCGCGAACCCGAGTCTCCGAAGCGCAACCTTAAGCGTGAACCCGACTCCCCAAGGCGCGATATCTCACCCCAGCCGCCAGAAGAAGCACCAGCCTCTCCGTACAAATGCGAAATGTGCTCGCTCGAGTTTGAAGACCGAGATGCGTTACTCATACACGTTCCAGTGCACATATGA
- Protein Sequence
- MDGDREFNLHWGGEVVVKHGPGTVTNEVICGLDNVHNSSFSNMTSEEMIAETDQMAAENLMFLSQDVVGYTETAELADDPNVECVTEEVITDDWVMSGGQDRVEVPMDHLSHPVLDLKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAYVPDDADEQDIEDLLVNNQIVKPKKKRGRRKKNPEPEERDAWQNMRSARTQQWSRRARSPPAAPRSPPPATPPPPAPAPATPPPPPADPARPFVCRHCGVAFAREKALQSHSRVHGGDSPVDCGECGELCWSRDALAQHAAQRHPNRPPQSTVDAYNDSDSGDDMDFRLSPESTPSVDHDRDRDRDRERPVFDTMKGPELFCSDCGVAFQRADLLRRHVAAAHSHGRGAASCEECGEGFGDALQLLAHAEGHAHRIAPRTKRFSRSRNSTSISSNSRQFPCKECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRALSSSPDLVQHLIQHCDANTALKRQPQTGPRKYKRRRKMKSDVSPVRREWRSPSPSLPRESPSPSPPRSPSPPPARRRRARAPRPPRPRMIHTEGPRTKQLRGRRPPRHPADDLRAIGPHSPSPSPRRELQLSPDRDLELSPNRDLELSPKCDLELTPKRNFKREPESPKRNLKREPDSPRRDISPQPPEEAPASPYKCEMCSLEFEDRDALLIHVPVHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00650259;
- 90% Identity
- -
- 80% Identity
- -