Eero028581.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY757007.1:6920816-6923923[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.1e-07 1.9e-05 25.6 1.3 2 23 92 113 91 113 0.97 2 10 1.3e-05 0.0012 20.0 2.3 1 23 118 140 118 140 0.98 3 10 5.8e-07 5.3e-05 24.3 1.7 1 23 151 173 151 173 0.98 4 10 9.5e-07 8.7e-05 23.6 0.5 1 20 179 198 179 200 0.95 5 10 7.6e-05 0.0069 17.6 0.4 2 23 212 233 211 233 0.95 6 10 0.00014 0.012 16.8 0.5 1 23 239 261 239 261 0.96 7 10 2.8e-05 0.0026 19.0 2.8 1 23 267 289 267 289 0.98 8 10 0.00079 0.072 14.4 6.1 1 23 295 317 295 317 0.95 9 10 1.3e-06 0.00012 23.1 0.5 2 23 324 345 323 345 0.97 10 10 0.0002 0.018 16.3 9.0 1 23 351 374 351 374 0.95
Sequence Information
- Coding Sequence
- aTGATAATCACTAAAAGCTTTATATTTTCCAGCATTAAAACCGAGTTCCAAGAAGAATCCGTATCATCACCTACTTGGGAGGAACCAGAGCTTACAAAACCGGAACTGCCTGATGATGGTGCCGAAGACCAGGATGCTGAGAAGattCAGCCACAGATCCCATACGATCAGGCGTTGTTGGAATCGGCGATGCGACTCGCTAGTGgTGTAATGATCCAGCAACATTTTTTGTCAAACTTTGCGCCACTCACAGCGCCGTCCGGCCATATGAAACGCTGCACCATTTGCGATAAGAAATTCGCGACACAAACCAACCTACAACGCCATCTCTTAATACATTCCCGTACTAAACACACCTGTCAAATATGCAACAAAGATTTCAATAAACCGGAACAACTAGAGAAACACGCGAAAAAACACgaagaaaacacaaataaaaacgAACGGAAATTCCCTTGCGATGTCTGCGATAAAAAATTCAAGTCTACATCGAATTTGTTTCAACATAAGCGCGTTCACATGGCGGTAAAACCTTTTCCGTGCCAGCTTTGCGATAAAACGTTTTCTACTAGAGCGAATCTAACCAAACATCAAGGGAAAAGTAGATGCAAAAAAATCACAGACGACCCTCTAATTTGCAACGTATGCAACAAAGTTTTCGATAGAGAATTCCTTTTGCGAAGCCATCTGGTGAAACACCAGACGGACAGGCCGTTCTTCTGCGATCTCTGCGGCATGAACTTCAAGTATAAAAGCGCTATAATCCGCCATTTGCAATGGCATACCGGCCACAGACCATACAAATGTAAATACTGCGGGAAAAAGTTCACTCATTCCGGTCTGATAAAACCTCATCTGCGCGTTCACACAGGAGAAAAACCGTACCAGTGTtctatttgttttaaatttttcgcCCATAAGCATAATATGGAGCGGCATAAAGTCAATCACGGACGAATAAAAAGATTAGTCTgtgatatttgcaataaaaagttCCCGCGCGAAAGCAGGCTGATTTACCATATGCGAACGCACACGAATGAAAAACATTTCAAATGTCATATATGTCATAAAAGCTTTTCGCATAAACAGAACGTTATTCGACACTTTGAGAGGAAGCACCCCGGTGCAGAGTATAAAGGTACGGATACAGATGCGAAAGTGGCTCTCAAAGTGTGGGACAGAGTGAAAAGCTCCTTCGAACCGCATTTTGATATGTATCAGCAACCCGAAATGATAATCTCATAG
- Protein Sequence
- MIITKSFIFSSIKTEFQEESVSSPTWEEPELTKPELPDDGAEDQDAEKIQPQIPYDQALLESAMRLASGVMIQQHFLSNFAPLTAPSGHMKRCTICDKKFATQTNLQRHLLIHSRTKHTCQICNKDFNKPEQLEKHAKKHEENTNKNERKFPCDVCDKKFKSTSNLFQHKRVHMAVKPFPCQLCDKTFSTRANLTKHQGKSRCKKITDDPLICNVCNKVFDREFLLRSHLVKHQTDRPFFCDLCGMNFKYKSAIIRHLQWHTGHRPYKCKYCGKKFTHSGLIKPHLRVHTGEKPYQCSICFKFFAHKHNMERHKVNHGRIKRLVCDICNKKFPRESRLIYHMRTHTNEKHFKCHICHKSFSHKQNVIRHFERKHPGAEYKGTDTDAKVALKVWDRVKSSFEPHFDMYQQPEMIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00649328; iTF_00650237; iTF_00650221;
- 90% Identity
- iTF_00649328;
- 80% Identity
- iTF_00649328;