Eero026905.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY757005.1:2524467-2533130[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 9.4 8.6e+02 1.6 1.2 1 13 58 70 58 72 0.89 2 17 2.1 1.9e+02 3.6 0.1 2 23 106 128 105 128 0.90 3 17 0.0032 0.3 12.5 0.1 2 23 150 171 149 171 0.96 4 17 1e-05 0.00093 20.3 0.0 1 23 175 197 175 197 0.98 5 17 0.37 34 6.0 1.1 1 23 205 228 205 228 0.96 6 17 0.0095 0.87 11.0 1.0 1 23 233 256 233 256 0.93 7 17 6.2e-05 0.0057 17.9 0.4 1 23 262 285 262 285 0.98 8 17 0.0028 0.25 12.7 0.4 1 23 291 313 291 313 0.97 9 17 2.3e-06 0.00021 22.4 2.5 1 23 319 341 319 341 0.98 10 17 0.00084 0.077 14.3 2.2 1 23 476 498 476 498 0.98 11 17 0.0056 0.51 11.7 0.4 1 23 502 524 502 524 0.93 12 17 0.0015 0.14 13.5 2.9 1 23 531 554 531 554 0.97 13 17 0.0023 0.21 12.9 1.8 2 23 560 582 559 582 0.94 14 17 0.0001 0.0093 17.2 1.1 1 23 588 611 588 611 0.98 15 17 0.0005 0.046 15.0 0.8 2 23 618 639 617 639 0.97 16 17 1.8e-07 1.7e-05 25.8 0.7 1 23 645 667 645 667 0.98 17 17 1.7e-06 0.00015 22.8 0.1 1 23 673 695 673 695 0.98
Sequence Information
- Coding Sequence
- atgcccatcctcacggagtatgcgtgGCGCCGCGGGTCTTTATTGCccaacaccggaTCCATCACCATAGAATCGAAAAAGAAACTCCGTAAATATGGTGACCAGCGTGACAACGCGGCTGTTATCTTGGAGTGTTCCAATATTTGCCCCTTCAAATTCTACTGCAACGTGTTCTATTGTGCGTACTGTCCTTTTCCATACACGTCGCCGGAATTTGGTCCCATCCAAAACCATACTAAACAGCATACAAATAGAGCTGCAGTCTTACTCGGTCTAAAACATAGTAAGATTATTAAAGCTGACGTCACGAATCTAAGATGTGAACTTTGTCAGAAGAACATGAGAGATATACCAACGCTGTTTGATCACCTAATTGAAGTACACAAGAAGCCCTTGCATAAAGAATATAGTCCGGGTATAGTACCTTACTTATTAAGCGATGGATTAGTATGCGCAGACTGCGGTCTCAGTTTCGATCGTTTCTTCAAACTGGATATACATATAAATGAACACTATCCATATTTCGTTTGTCCTGAATGTGGTCGATCTTTTATAAGTGCAGAAAGATTGGCAAACCATCTTATAGTacataagaaaaagaaacagaCCCGGTTCAAATGCTCAAAATGCAATGATGATTTTCCTAGCGCACGTCTTAAAAAAGAACATCAGATATCTAAACATAACATCTTCGTCCATAAATGCCCATATTGCCCCGAAAGGTTCAAAGAATATGCAGATAAATTGGTACATTTAAATGAATATCACGATAAGAAAATTGACTATCCATGCAAAATGTGTCCAAAAACTTTCAAGGCCTCCGCGAATAGATTGCTCCATATGCGATCCGTTCACATTAAAAACAAATCATTTATATGCTCAGTTTGTAGCGATATGTTTATTTCGTTTGCTCAACTGAAAAACCATATGATAAAGCACGGCGGAGAGAAGATACACCAATGCCAAGTGTGTAACAAAGCTTATGCTAGGAAGAAGACGTTGAAGGAACACATGCGTATACACAACGACGATAGACGATTTGCTTGGTCAATCGGCATAAAAAGGAGGCCAAAGCTCGGAGAGTATGGAGACGAGCGAGACAACGCGGCTATTATCTTGCAGTATTCCAATATGTGTCCGTTCAGATTTCGAGGACATACATTTTATTGCGCGAACTGTAATTTTACTTCGGTAGAGTTTGAAGCCATCGCAAAGCACAGCGATGAGCATGAAGATAAGACCGAGTACTTGCGCGCATCCCGTAACGTAATACTCAAAGCGGATGTGACGAATCTGAGATGCGAACTCTGTCAAACGGGGATGAACGACATACCGATGTTGTTTCAACATCTGATCGAAGTACACAATAAGCCCATAAAAAGTGAATACGAAACCAGCATCGTTCCTTACTTGTTGATAGGCGGATTCAGATGCGCCGAATGTTTTCTTGAATTTGATCATTTCAGGAATCTAAATAGCCACATGAATGTGCACTATCCTTATCACGTCTGCGTAGAATGCGGTGTGGCTTTCTCATCAGAGAAAAGACTCCAGAATCATTCTATACAACATTCAGACAAGCCACCTCAGTACAAATGTTCAATATGCGACGAGAAATTTCAATTTCGATCTGAAAAGCGTAGGCATTTGAGTTCAAAACACAACGTTTACTTAAACAAATGCCCGTATTGCGGCGAGCTGTTCAAACAATACGCCCAGAGGACGAGACACATAAGCGAGTGCCACGACGTTAAAGTTAACTATCCCTGTCCTATGTGTCCGAAAGGGTTCATGTATTCCTCGCACAGATCGACACATATCCGGCGTGTTCACAAGAAAGAAAAGAATGTCTCGTGTACGGTCTGCAGCGTCCAGTTCTTTAGCTCCACTGAACTTAAAAAGCATATGATCAAACACTCCGGAGTGAAAACTCACCAATGTCAAATATGCAGTAAATCTTTTGGGAGGAATGGCAACTTGGCGGCGCATATGCGAATTCATAATAACGATAAGAGATTTGTATGTGCTCTTTGTGATAAAGCGTTTGTTCAAAAAGGTAGTATGGAGATTCATATGCGAACCCATCAGAGGCCCTCGAAGTCTTCACCAACTCAAGAAGAAGAGTGCATTGATATTAATAACTACTTAAAAGTGACGCTTGCGTCAACATCGGTGAACGAATGA
- Protein Sequence
- MPILTEYAWRRGSLLPNTGSITIESKKKLRKYGDQRDNAAVILECSNICPFKFYCNVFYCAYCPFPYTSPEFGPIQNHTKQHTNRAAVLLGLKHSKIIKADVTNLRCELCQKNMRDIPTLFDHLIEVHKKPLHKEYSPGIVPYLLSDGLVCADCGLSFDRFFKLDIHINEHYPYFVCPECGRSFISAERLANHLIVHKKKKQTRFKCSKCNDDFPSARLKKEHQISKHNIFVHKCPYCPERFKEYADKLVHLNEYHDKKIDYPCKMCPKTFKASANRLLHMRSVHIKNKSFICSVCSDMFISFAQLKNHMIKHGGEKIHQCQVCNKAYARKKTLKEHMRIHNDDRRFAWSIGIKRRPKLGEYGDERDNAAIILQYSNMCPFRFRGHTFYCANCNFTSVEFEAIAKHSDEHEDKTEYLRASRNVILKADVTNLRCELCQTGMNDIPMLFQHLIEVHNKPIKSEYETSIVPYLLIGGFRCAECFLEFDHFRNLNSHMNVHYPYHVCVECGVAFSSEKRLQNHSIQHSDKPPQYKCSICDEKFQFRSEKRRHLSSKHNVYLNKCPYCGELFKQYAQRTRHISECHDVKVNYPCPMCPKGFMYSSHRSTHIRRVHKKEKNVSCTVCSVQFFSSTELKKHMIKHSGVKTHQCQICSKSFGRNGNLAAHMRIHNNDKRFVCALCDKAFVQKGSMEIHMRTHQRPSKSSPTQEEECIDINNYLKVTLASTSVNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -