Basic Information

Gene Symbol
-
Assembly
GCA_963580505.1
Location
OY756981.1:11781683-11792032[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.043 4 8.9 1.1 3 23 649 670 648 670 0.90
2 24 2.3 2.1e+02 3.5 1.4 4 23 1022 1043 1020 1043 0.84
3 24 0.031 2.8 9.4 0.6 1 22 1048 1069 1048 1069 0.95
4 24 6.8 6.2e+02 2.0 0.2 1 23 1110 1133 1110 1133 0.89
5 24 0.0026 0.24 12.8 0.6 2 22 1143 1163 1142 1163 0.94
6 24 1.3 1.2e+02 4.3 0.4 2 23 1171 1193 1170 1193 0.90
7 24 1.1 1e+02 4.5 0.8 3 23 1214 1235 1212 1235 0.93
8 24 0.0026 0.24 12.8 1.7 1 23 1241 1264 1241 1264 0.94
9 24 0.14 13 7.4 0.0 1 23 1290 1313 1290 1313 0.90
10 24 0.02 1.9 10.0 3.4 1 23 1318 1340 1318 1340 0.97
11 24 0.0086 0.79 11.1 0.8 1 23 1346 1369 1346 1369 0.95
12 24 0.00013 0.012 16.8 1.5 1 23 1382 1404 1382 1404 0.97
13 24 0.00019 0.018 16.3 1.8 1 23 1453 1476 1453 1476 0.97
14 24 0.0078 0.71 11.3 0.6 1 23 1538 1561 1538 1561 0.96
15 24 0.0029 0.26 12.6 1.5 3 23 1588 1609 1586 1609 0.95
16 24 0.095 8.7 7.9 0.1 2 23 1615 1637 1614 1637 0.93
17 24 0.011 0.99 10.8 0.2 1 21 1681 1701 1681 1702 0.95
18 24 0.0013 0.12 13.7 0.6 1 23 1712 1734 1712 1734 0.93
19 24 0.00012 0.011 17.0 0.3 2 23 1835 1857 1835 1857 0.93
20 24 8.3e-07 7.6e-05 23.8 1.3 3 23 1864 1884 1863 1884 0.98
21 24 0.015 1.3 10.4 0.2 3 23 1903 1923 1901 1924 0.95
22 24 0.093 8.5 7.9 0.0 1 23 1945 1967 1945 1967 0.98
23 24 0.03 2.7 9.4 0.6 1 23 1973 1996 1973 1996 0.95
24 24 0.00028 0.025 15.8 0.4 1 23 2004 2027 2004 2027 0.96

Sequence Information

Coding Sequence
ATGGATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCAAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTTGCCTCGAAAATCAAGGATTGCGTGTCGGTTCAGATAAGCGAAAATGACGAATTGCCTACTAATGTCTGCAGGAAATGCTTGGACAATGTCAATAACTGGCATTTATTTAAGACTGTGTGTGaaaagacacaaaacaaactaCAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAGTAAAGAGTGAACCATATCCTGATGAGGTTTATGATGATGGAGTGGTCATTGATGGTTCATACCCAATTATTGAGAATGTGGCTTCTACAAGCAAGCTTCAACCTGAAGGCCCTCCTATCTTGGCTTCTTTGGGACTCACACCTAGGAGTGATAAGACATTTGTGGATCCACGAATGGACTGGCATCGGGTCCATGCAATACTGGACCTGGTCCAAGAAGACAGTATCATTGATTCACTCCAGTCCACAGAAGAGAGTGATTTGCTCCACCATTCAAATCATAATTCAGATTCTGAAGGAGAACTCCAAACAGATTTGGAAGATGATTACATTTACTGCAAAGATGGTTACAAATGCAGGGACAAAAGCATCGTATCAAAGAACCCTCAAATATCGGAAACCGTCAACGTGGATCGCATAAAAGAGGCCGATAATATGAGAAAACGTAATGTCGCCGAGAAGCATTGTCCTCGACCTAAAAACGCCTGGCAACTACTGTTCACAGATGATCTACTCGAGCTCATTGTCACGTCAACCAACGAGAGTATTGCCAAGCACGGTAAATTGAACTCCACTGCCACTAATGCTAACGAAATAAGATCGCTCGTTGGCATATTGTACATGCACGGAATAATGAGACCAACGTATCAGAGCCACAGTGATCTCTGGGACATCAGCTGTGGTATCCCGTCCATAAAGGAAGCTATGAGTTTCGACCGTTTCAAATTCCTCCTACAAAACTTGTGCTTCGACACCGATAATGATGATGTGCTACGGTTTGACACAATGAAAAGAATACGGAAAGTTTTCGAAATCTTCGCCATGAATTGTAGGACAGCCTTCGATATGGAAACTGTTGCGGTCGTCGATGAGGTTATTGTGCCAGTTTACGGACCTTGTCCATTTCGATACGCTATTGATAAGAAGTCGCTGAAACGCGGCATTAAAATTGCCCTGCTGGTCGACCCGAATAACTTCTACGTGAGCAATTTGGATGTGATAACTGATCCTTATTTTAGTGCTGAAGAAATTGTGAAGAAAATTACCCAACATTTGTGTGGGAGTGGAAGGACTATTGTAATGGACAGCtggtacatttccaaatcactCATGGACAAATTGAAGTCATACAATCTTTACACAGTAGCAGCTTTGAATCCTGAAAATATTGGAATACCACCGCTGTTTCTTTCTCAGTACCGGAAAAGCCAATCATTCATGTCTGGATTTCTCGATGACAAAGTATCGCTGACATCTTACGTTGATTCTAAATCGAAGATTATAAATGTTATAACAAATGAGCCTAAATTTTACAAAAGGGGCCCAAATATCAATCATATAACATCAGTATCAGTATACAAGAAAAATCAGTCTGCGGTTGAGGTGCTTGATGTTCTCATGCATTACTACACCACAATGCAGCACACAAATGACTGGACACTCTCACTGTTCTTCACTTTGTTAAATATTGCCTCTGTCAATGCCCAGGGGGTGGAGAGCGAGAACAATGAAGATGAAGACTACGAGGAGAGCGATATTCCTCAGCCCGTGAAGGTCCCTCACATGCCCGAGGTCTCTATCACGGTGATGCGGCCTACAGGCGAGACCCTCCACTCGCGACAAGGTATCCAACAGCTCGCATCTAAGGACTGCCTTCTGTGCGGCCGGTCCTACAGATACTCTCACAACGCTCGTCGGCACGAGCTAGCATCACACGGTTTTGACCGctacacaaacaaaacaaccaAAAAATCACATAATTCGCGCATGACACCCAAACTTAGACCTAACCCTTTCAATCCTAAATCACGGCTCATGCCCAACCCCATTAGCCATAAGCTACAGTTTATGCCCAAAAATATGCCCGCCAAAATAATACCGCAGAAACTTGTTCTCCCACCGAAACCGATTCCTATAAAAACACCTAAAATGGCACAAAATAATTTACCGTATCCTCTCCGCATAAAGGCACTCAAGGACTTACAGATAAAGAAAAAGGAACCGCAGATTTTGAAAACGTTACTTACCTCGAAACCCGAGGTGCTAGTGGCGGAACCGGAAATACTAAATTCTGGCCCCGAAAGTCCCGAAACGCTAATATCCGAGCCGGAAATCGCATCATTCCAGGTAGAAGCTATTCTGTCGGAACCACCtgaatataatcaaaatgaagaTGGAGGAGATGTAGAAAATAATCAAAGTCAAACTTATGATACTGTTGATATGGAATCTGATCATGAGATTGAAATCGCCCGTCAACAGGAAAACAAAAGTGATTTTGTGGAAAATAACGATGAACATATTCTTCCGGACCAAGAAAACCACGTCGATGATGGTGACGCAAAAATGGCAGAGAGTGACAATGAGGGAGACCAAGATACCGGCGACAGTCAAGAAAACAATATGGAAATTGACGAGACCCACGACGCTTACATTGATTCGCACGTCAACGATGAATGTAAAGAAGATAATGAGGAAGGCGTAAATGAGGAACATGAAGTTAATCCCGAAGccgatgttaatgatgatgaagatatgcCGCCAGCACCTGTTGTTGAATTAAACGATGAAGGTCAACACCATTCGTCTAGCGAGCTTAATGAGGAAGAAGAGGAACTAGATGAAACCGCCGATATTAACGACACAGCTGATGGCGAACCTCTGGAGCAAAAGGAGCTTGATCCAGATAAAACGTATATTACTAAAGCACAGAGGGACTTCATTGTCAAGTACCGCGACATAATTGAACAAATCAACACTAAAAGATGTCTCTGCTGCGACAAGTCGTACCCTCGCAGGAAAGCGGTCGTTCAGCATCTACAAAAAAATGGACACAAAGTTCCTAAACATACGTGTTATAACTGTGTGATAACATTCACTCATATCGGTGCTTTACTCAGTCACATGAGGTCCAATTCTTGTACTGATCTTTggaaaatcatatttgatacaAATGGTATTCCTGAAGACATGATACTTGAACACGAGCCTAAGGCTAAGATCGCATCTAAGGATATTTTCAATGCAAGGTCCTACGCCTGCAGACTTTGTCCTGCTAAATTCCAGTTGAAGCAATCGATAATGAAGCATGTGTTGGACATTCACGAAGACGGCCAGTCGGCTATCCCGCTCGTCTGTGTTCATTGCCGAGCCAAATTCAAAGACAGAAATCTACTCAAAAAGCATATTCGTGTTGGCGGTTGCACAGTTTACATTCATTGTGACTTGTGTTCAGAACAGTTTTCGAACATGCAAGACTTCAGCGATCACGCCTTGTTAGTGCATGCCGACCACTTTGAGAAGTCGGAGAATTTGATCAAACGTATCGACGGTCGGGTTACCGACTGCTCTTTGTGCGGGAAGAAGAATAGCAACTACTTGAGTCTCGTTAAACATTTGAAGTTTGTACACAATGATGATACACCACATCACTGCCAAAACTGTGACGCTAAATTTGAACAAGCCGCTGACcttaataaacatatttatgtGCAGCACTCAGATCAAGCTTTGGCCTTGCAGCCTAATGAGCCGGATATGTCTCTGGTAAAAGAAGAAGCTGAGGAATACCATTATTCATGCACAGAATGTAATGCTATATTTGAAACGGTCGATGCTTGGACGGATCACCAAGTGGCTGAGCACAATCAAGTCGCTCATCATTGTGACCAATGCGAAAAGAAGTTCTTACGACCTTCGGAACTAGCTGAACACAAAAATACCCACTTAAGAGTTAAGTTCTATCCTTGCAGTATATGCCCGAATTCGTACAGTACTCCTCAAAAGTTATCGGATCATGTTCAACAATGTCACCCTGGAGGTGGAACGAATTCCAATGCAGACACAGAATTTTTCTGTGACATTTGTGTACGATCATTCAAGAGTCGCCAAGCCTTTTCAAATCACATGCGCATACACGCTAAGGTGCCGACTACTAACAGAAAACCGGGTGAACCGAAAGGATTCGATCCGCGCATTATCGGCAAGCCAATTAAACAATTTACCATGGTACAACCTGGTTTCATCAACTTCAAACCAAATATGAACGTTCCTAACGCGCCATACTCCTGTGATATATGCGGTAAAGGCTTCATGCATAAGAAAAATATATGGAAACACAAGAAAGTGTTGCACGCAGATATTATAAACGATAGAAACGATAGCGAGGAGAACACCATGCATGCCTCCACAGAGGATGACGACTATAATCCTGAAGAGAATGGAGCTCTTTCTACTCCGCAGTTCGACAGTTTCAACTTCTCTAACTTTTCTAACAGCACGCCTCAGAAGCAGCATGTCAGGATAGATGCTATGCCTTATTCATGCGAATTGTGTTCGAAACGATACCCGCTTGCGACTAGTTTGTGGAAGCATAAACGAGCTAAGCATGGCATTGTTAATCCCAGTGCCAGCAGCAGCAATGAAACTCCAACTCAATCAACGCCAACAGAAGTCGGTCGGTCCAACTGTACTATTTGCAAGATAACTTTTGCAGACAAGAAGTCTTACTATCGTCATAGAAAGAACGTTCACAAAACAGCTACGCAAATGTGCAAGATATGCGGCAAGCCGCTTAATTCCACTTTGGAACTTTACGAACATCTGAAAGCTGCGCACGCTCGGGAATTACTGGGATACAACGCCAATCAAGGTTCGAGTAAAACGCAAGAGGTGTCTCAGGACCAAGATGCTGAATACGATAACGAGTCTGAACCTACGGACCCGAGCATGGATTATCAAGCTCGCTATCCATGCGACACCTGCGGCAAACAGTTTGTAGGTCTCCTGGCGTTACAGAACCATCAGTGCATAAATCAGCTTCCTTCGCAACCGCAGACTTTTGACTGCGAAATCTGCCACAAAAGCTACACGTCCATAGCTGCCTTGAAGAGTCATCGCGGTTGGCACTTGCGCTCCCCTGACGGCAAAGCGGCTGCCAACAACAGTGGGCTCTGGATGCCGCAACATAAAGTGACAAATAAAGTCAGCAAGCACGAGGTCGTTGACGCGGTGCAATTGGCTCGCGTGTCACATTCGACTCCCACCTCCCATTCAACTCCTTCCTCCCATTCTGCTCCTGCCGCTGCCGTCACGGCGAAAAGAAGATTACCACCGGAGGTCGAAGTGACCGTCGTCAATCCGAACAAAAAGATGCGGTCCGATGACTCGATCGACATCGACCAGCAAAACGAAGCGATAGAAGGCAGATACTGTACCATCTGTGACAAGGAGTTTACAAAGCGTGCTGCTTATCAACGTCACATGGACGAGGTGCATCAGCCGAATTCGGTTTTCTGTCCGGTCTGCGACAGGAGTTTTACGAGGAAATCGACGCTCCTGGTGCACATGAAGAAGCATTATGAGAGTGGGGAGACGAGTGCGTCCGGACTACAAGAAGAAGAAGGTTATGGGTGTGATGTTTGCGGGGTACAGTATGACAGTGAGAAGGCCTTGAGAGCTCACCAAGCCAGGCACCATGCGGAAGATTCTGGTGAGTCTGAGGACGAAGGTAACGCCCCAGCTGCGCTCCCCGGTGAGTTCACTTGCGGAATGTGCGGGGACGGAGTCGCGACGCCTCGCGACTTGATCGCCCACCGCTCCATGCACGCAACTGTCACTAAATTCTTCTGCAACATTTGCAAGGTATACTTTGCGCGAGCGCTGGATTTATCCTCACACACTCGCGCGAGGCATTCTGACAACGAAAAAGTGTTTTTCCCGTGTGCCATGTGTGACCGGTTCTATATGAACAAGAAGAGTTTACAACGCCATATTGAAATGGCGCATTGA
Protein Sequence
MDVNYDRVCRLCLSSQGELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDELPTNVCRKCLDNVNNWHLFKTVCEKTQNKLQSLIKKDGSLLEEVKVKSEPYPDEVYDDGVVIDGSYPIIENVASTSKLQPEGPPILASLGLTPRSDKTFVDPRMDWHRVHAILDLVQEDSIIDSLQSTEESDLLHHSNHNSDSEGELQTDLEDDYIYCKDGYKCRDKSIVSKNPQISETVNVDRIKEADNMRKRNVAEKHCPRPKNAWQLLFTDDLLELIVTSTNESIAKHGKLNSTATNANEIRSLVGILYMHGIMRPTYQSHSDLWDISCGIPSIKEAMSFDRFKFLLQNLCFDTDNDDVLRFDTMKRIRKVFEIFAMNCRTAFDMETVAVVDEVIVPVYGPCPFRYAIDKKSLKRGIKIALLVDPNNFYVSNLDVITDPYFSAEEIVKKITQHLCGSGRTIVMDSWYISKSLMDKLKSYNLYTVAALNPENIGIPPLFLSQYRKSQSFMSGFLDDKVSLTSYVDSKSKIINVITNEPKFYKRGPNINHITSVSVYKKNQSAVEVLDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQGVESENNEDEDYEESDIPQPVKVPHMPEVSITVMRPTGETLHSRQGIQQLASKDCLLCGRSYRYSHNARRHELASHGFDRYTNKTTKKSHNSRMTPKLRPNPFNPKSRLMPNPISHKLQFMPKNMPAKIIPQKLVLPPKPIPIKTPKMAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVAEPEILNSGPESPETLISEPEIASFQVEAILSEPPEYNQNEDGGDVENNQSQTYDTVDMESDHEIEIARQQENKSDFVENNDEHILPDQENHVDDGDAKMAESDNEGDQDTGDSQENNMEIDETHDAYIDSHVNDECKEDNEEGVNEEHEVNPEADVNDDEDMPPAPVVELNDEGQHHSSSELNEEEEELDETADINDTADGEPLEQKELDPDKTYITKAQRDFIVKYRDIIEQINTKRCLCCDKSYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRSNSCTDLWKIIFDTNGIPEDMILEHEPKAKIASKDIFNARSYACRLCPAKFQLKQSIMKHVLDIHEDGQSAIPLVCVHCRAKFKDRNLLKKHIRVGGCTVYIHCDLCSEQFSNMQDFSDHALLVHADHFEKSENLIKRIDGRVTDCSLCGKKNSNYLSLVKHLKFVHNDDTPHHCQNCDAKFEQAADLNKHIYVQHSDQALALQPNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICPNSYSTPQKLSDHVQQCHPGGGTNSNADTEFFCDICVRSFKSRQAFSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMVQPGFINFKPNMNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEDDDYNPEENGALSTPQFDSFNFSNFSNSTPQKQHVRIDAMPYSCELCSKRYPLATSLWKHKRAKHGIVNPSASSSNETPTQSTPTEVGRSNCTICKITFADKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTQEVSQDQDAEYDNESEPTDPSMDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVVDAVQLARVSHSTPTSHSTPSSHSAPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSIDIDQQNEAIEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYESGETSASGLQEEEGYGCDVCGVQYDSEKALRAHQARHHAEDSGESEDEGNAPAALPGEFTCGMCGDGVATPRDLIAHRSMHATVTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-