Eero028005.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY757006.1:5904046-5906379[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.5e-06 0.00032 21.8 4.0 1 23 6 29 6 29 0.95 2 21 0.0011 0.097 14.0 0.3 2 23 35 57 34 57 0.95 3 21 1.1e-05 0.00096 20.3 0.2 2 23 66 88 66 88 0.97 4 21 8e-06 0.00073 20.7 1.3 2 23 97 119 96 119 0.96 5 21 8.3e-06 0.00076 20.6 2.5 2 23 127 149 127 149 0.95 6 21 2e-06 0.00018 22.6 2.0 2 23 157 179 156 179 0.96 7 21 1.4e-06 0.00013 23.0 4.6 1 23 185 208 185 208 0.98 8 21 2.5e-06 0.00023 22.2 1.1 1 23 243 266 243 266 0.96 9 21 5.9e-05 0.0054 18.0 0.6 1 23 296 319 296 319 0.98 10 21 0.37 34 6.0 3.4 2 22 327 347 326 347 0.93 11 21 0.34 31 6.1 2.1 2 23 356 378 355 378 0.94 12 21 0.0044 0.4 12.0 3.6 1 23 402 425 402 425 0.97 13 21 0.00013 0.012 16.8 0.7 2 23 432 454 431 454 0.96 14 21 7.1e-05 0.0065 17.7 4.0 2 23 461 483 460 483 0.94 15 21 0.0075 0.69 11.3 2.2 1 23 489 512 489 512 0.97 16 21 0.98 90 4.7 2.5 2 23 520 542 520 542 0.94 17 21 0.00021 0.019 16.2 0.2 1 23 549 572 549 572 0.96 18 21 0.018 1.6 10.1 0.3 1 23 579 602 579 602 0.93 19 21 0.04 3.6 9.0 1.8 5 23 619 638 616 638 0.88 20 21 5.6 5.1e+02 2.3 0.6 3 23 660 681 659 681 0.83 21 21 9.8 8.9e+02 1.5 0.3 1 11 688 698 688 700 0.91
Sequence Information
- Coding Sequence
- ATGTCACTAGGAGACTTTGTTTGCGACTACTGCAGCCGCTCGTTTACGAGGAAGTACAATCTTCAAACGCACATAGAGAACTGCCATGTCAACTCAACATGCTACTGTGAGATCTGTGACATGAAGTTCGGAAGCCCTGGAGGTTTGCAGTTGCATCTGTCCAGGGGGCACAACAGACATGGCGAGCCGTTCCCCGAATGCGACATTTGCGGTCGCATATTCACTAGGAAACAGAATATAATGTCGCACATGATTACTGTACATCTGCAAGGCATTGGACCCGAAATACGATGCCGAATTTGCGAAAAAACTTTCACTACAGAACGAAATATGAAGAGGCACATCAAGATATTGCATAATCCTGATTTAGAATACCCTACTTGTGATGATTGCCATAAGTCCTTCAAAAGCAAGCATACACTCATAGCTCATATTCAAGCAGCACATAATTCTAACGATAATACAATCAAATGTCATATGTGTGATAAAATATACACAAATAACAGAAACCTAAAACGACATATTGAGATGCTACATGGAGAGAAAGAGAACCACAAATGTCATATCTGTCCTAAAGTTTACACTTCAAACCAGAGTCTGAGACGTCATATTAAAACTATGCACAATTCTGACGAAGAAAGCTTTCAGTGGGAGCTAAAATTGATAGACTCTGAGAATATAGATTGGCAAAGCGATGACTCCAGTGACTCCTCAGAAAGCGAGTCTTATACATGTGAGACTTGCAACAAGACTTTCAGGGAAGAATCGCAATTGCGGCAGCACATCAAAGAGGAACACTCCTTTGACGTCTTTTACGATTACTGTAAAAACTATTTGCAGAAGATGGCTACCAAAGATTATCCTACAGAAAATAAGCAGCCATCCTATAAATGCGAATTCTGCTCCACAGCTTTCATCAATGTCTACGAACTCAAGGATCACATGAAAGTTAACCACGATACTGAATATAGCCTGTGCACTTGCAACGTGTGCTTCAGCAAGTTTTACAGCAAGGAAACCTTGATGGAACACAAGAAGACTTGCATCCCGCCGCCAGACGTTAAATCTTGCAGTCACTGCGATAAACTGTTCACTGAAACTTTAAGTTTAGAGTTTCATATCAGAATATTTCATCCTCAAGCTCAACTCGCCGATTCTAACATATCTTCCACGAAGTCAGACGAAGTTGCAGACTTTAATTCCTTTAGGTGCGACTATTGCGAACGAATATACTACAGTGATAGGTCTTTGAAGCATCACATTAAACTAAAACACTCAAATGACGAGGCAGTCGAATGTGGATATTGCAATAAGATTTGCAATAACAAGTACTACTTAGCGTCTCACATTAAAATCGTTCATAGCGGGGAAGATGTATCGAAATGCGACTACTGCGATAAACATTTCAAATCCAAGCGAAACATTAGAAGACATATCGAGTATACGCATATGGGAGTGCAACGGTACAAGTGCATCGAATGCGAGACGCTTTTCAAAGAAAAGCGCAGTCTACGTAAGCACGTCCGGACCAAGCATCCGAATTCGGCGACATTCCCGCAATGCCTTTTGTGCAGCAAGAGATTTGAGTCCGCAAAAGCTTGCAAAATACACCTAAAACTTACACACTCCTTCAACATGAACACTTATCCATGCGACTTGTGTTCCGTCTCCTTTGCATCAAAAGACACTCTCAAAATACATTTAGATTCGAAACATTTAGCTGAAGACGAGATCTACAAATGCGTAGAGTGCAATATGGTCTTCAAAGGAGCTCAAAAGTTCGAAGAGCATAACGAAAAGATCCACACGTACATCGAGGCTACAGCCGCCCAGAAAGTGTTACCTCGTTGTATTATATGCATAAAAGACTTTAGCACGCGGAAAACTCTGAGGCGTCACATTAAAAACTTTCACGAAGAGTTTGACGTGGACGAGCTCGCTGCCTTCGGCTCCAATAAACGGATCTTCAACGTTGACTGCGATGAATGCCTTAAGAACTTCAATGATGATTACTTTGCTaacatgcataataaaataaagcataTAAAAAATTCTATAGTTTTCAAGTGCGAGACCTGTCGCTCTTCGTTTAGCGCATTAGAGTTTGCGATCCAGAGACATAGGATTCTGAGCTTTGGTCCGACAAAATCAAAGGTGATTTTGAGTGATCTTTGCACTACTCAAATGAGCGATGCAGACGATGAAGGCCAAGGGAGTTCGGGATTTGCATCGTTGCATAAATATATGGAAGCGGAGAGTACAACCGCTGATATTAAGACTGAACAAGAAGAGCTGATGCTTGATGATGTGAAAGAAGAACCTTTATCTCCTTAA
- Protein Sequence
- MSLGDFVCDYCSRSFTRKYNLQTHIENCHVNSTCYCEICDMKFGSPGGLQLHLSRGHNRHGEPFPECDICGRIFTRKQNIMSHMITVHLQGIGPEIRCRICEKTFTTERNMKRHIKILHNPDLEYPTCDDCHKSFKSKHTLIAHIQAAHNSNDNTIKCHMCDKIYTNNRNLKRHIEMLHGEKENHKCHICPKVYTSNQSLRRHIKTMHNSDEESFQWELKLIDSENIDWQSDDSSDSSESESYTCETCNKTFREESQLRQHIKEEHSFDVFYDYCKNYLQKMATKDYPTENKQPSYKCEFCSTAFINVYELKDHMKVNHDTEYSLCTCNVCFSKFYSKETLMEHKKTCIPPPDVKSCSHCDKLFTETLSLEFHIRIFHPQAQLADSNISSTKSDEVADFNSFRCDYCERIYYSDRSLKHHIKLKHSNDEAVECGYCNKICNNKYYLASHIKIVHSGEDVSKCDYCDKHFKSKRNIRRHIEYTHMGVQRYKCIECETLFKEKRSLRKHVRTKHPNSATFPQCLLCSKRFESAKACKIHLKLTHSFNMNTYPCDLCSVSFASKDTLKIHLDSKHLAEDEIYKCVECNMVFKGAQKFEEHNEKIHTYIEATAAQKVLPRCIICIKDFSTRKTLRRHIKNFHEEFDVDELAAFGSNKRIFNVDCDECLKNFNDDYFANMHNKIKHIKNSIVFKCETCRSSFSALEFAIQRHRILSFGPTKSKVILSDLCTTQMSDADDEGQGSSGFASLHKYMEAESTTADIKTEQEELMLDDVKEEPLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00650228;
- 90% Identity
- -
- 80% Identity
- -