Basic Information

Gene Symbol
SNAPC4_1
Assembly
GCA_963580505.1
Location
OY757000.1:5472048-5474378[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3e-11 4.5e-08 33.9 0.4 1 45 255 301 255 302 0.95
2 4 1.3e-05 0.019 15.9 0.0 3 44 310 355 308 357 0.91
3 4 6.2e-11 9.2e-08 32.9 0.0 1 43 361 403 361 406 0.96
4 4 2.6e-07 0.00038 21.3 0.0 3 45 413 457 411 458 0.91

Sequence Information

Coding Sequence
ATGGAGCCCCTAGAAGTTGATAGTGATGATGACTCTAGTGGTGGAGATGAAGAAACTGACCTGGCCATGGAAGACTATCTAAAAAATACCCCAGACATTGAAACTATACGAGCCAGCACAAGTAAACATACCTCAACTTATACACAAAAACAACTAGAAGATATAGCTCTTTTTGATGAAGCTATAGAAATCAACAAAGAGGCAGAAGCTAAGTATAAAGAGCTAGAGGCTGGTCTTTACCGAAGTCTAGCTGAAGTTAGAATAAAACTCAAAGAAAATGAAACagcattaaaaaaagaaactaatCCATCCACCAATGAGAGCAGATTCAGCTATTTACGAAGTGGCAAGCCATATTTTAAAGACAAATATAATTTTCCAGCACCTGACAATGAAGATACTATTTTGATGAAACAATCTGAAATGTATGACTTTTCTCAAGTTTCTTCTGTGCCTGGATGGACAGTGAAGGACAAAACTGAACTAGTCAATGCGCTACTAGAATTTTCTAGAGAAATACGgaaaaaacatttgatttcagAAATAGCAAGATTGCGCAGAGCAAACAAAAACGAGAATTTACTAGAGATAACTAAATTGGAGAGAGAAATTACACAACTGAACAAGAAATCATTGCAAGATATTGCTCTACCATTGGACCAGGAATATGACTGGGATGCCTTGTCTAATTCCTTGAATAGAAGACATTCAGCACAAGAATATCGATCTCTTTGGAAACTATTCTTCCACCCCTCCATTAATAAAAGTAACTGGAGTAAAACTGAGCACCAACAGCTACAAAAGATCGCCACTAGACACAACATGCAAGACTGGAACCGTATAGCAAAGGAGTTGAATTCTGGACGCTCAGGCTATCAATGTTTTGTATATTATCGTACAAACATGATTGATATAACTTCAAGTCGCAAATGGACTCCTGAGGAAATTGAATACTTACAGAGAGTAATTGACTACTTTAGGGAAGGCACTTACATTCCTTGGGGAAAAGTGGCCACTGCTATGGACAGCAGAACAAAGATACAGGTTTACAACAAATATACAAGGATGATGGAGTACAGAAAAGGTAGATTTCTTGAAGAAGAAGATGTGATCATACTTAAATGTTACCAAAGATATGGACCAAACTTCAAAAAGACAGCTGAATATCTTCCTGGGAGATCAACATCTCAGCTTCGAACTCGTTTTAATTTGTTGATTAAATTCAGAGTTTCTAAAACATGGACTGTTCAGGATGATAAGCTCCTTATTCAAGTCATGGCCAACATGGGTTCAAATTGCAACTTTGCTGTTGCTGCATCATATTTCCCAGGGAAAGACAGAATGCATGTCCGGTCCAGATATATAACTTTAATGAAATGGATGAAATCTCATCCAGCCACTGATATCTCAATGGCACCCCGTCGTGGAGCCCGTCGTCTTGTTCATGGCTATGCCGACATTACTTTAGAGGAAGCAGTTGCAAACCTGAACAGAAGGATTGAAGCACAAGTTCAAGCtaagaaaactaaaaaaataactagattTTCTCCTGAAGAACACATTGAACATGCTATCATGACTACacttataaatgaaaatataaaagatGAAGCCAGACAGAAAGCAGAGggatatgaaacaaatgaagtaTGTGCACATTCACTCCCCAAAAATAGTACATTGTCAGAAAACATGACTAATATGCGCAAATTGCTAATTTTTTTAAGATCGGTGTTGAACGAAGATAGGTTTGACACAAGCAAATATAGCCGACTGTATCCAGGCTTCAAAGAAGCACTGCCAGAATCATCCCTTCTAAAAGTGAAATCTTACTCAAAGATACAAGGTGTGAAAAccataaaaatgaatttatcacCAGATGTATGGGGCAATTTGACACTCGGGAACACACAATATGTATTACCACCAAATTATGCTACATTGACAGGATGCAGAGTCTTGATGAAGCATATGAGTATGCGTTCTGAAGGAAGACCAGAAGATGAAATTAATCTAAGTCTTATGGCTCGTAGGAATGTTTTTTTGAAGGAAGCGTTAGCCACATTGAAGGAAAGGTTCACAGCATTGTTCTTGTGGCCAGTATTACTTTCAAATGAGGGACCACCTCTGACTACCACAAACGAGGTCTATGTTCCTCGAATAGTACCTCAAGTAAAATATTTGCCTCAGCCTGATGGGCTAACTATTCCCTCGCCAAAGAAATGCCATATGTTATTTGGGCTTGGGAtgaagccaaataaaaaagttgaagGTGCAAGCAAAGGTACAACTATTGATAGTCCCAAAAGACGTAGAATATCTTCATCCTAA
Protein Sequence
MEPLEVDSDDDSSGGDEETDLAMEDYLKNTPDIETIRASTSKHTSTYTQKQLEDIALFDEAIEINKEAEAKYKELEAGLYRSLAEVRIKLKENETALKKETNPSTNESRFSYLRSGKPYFKDKYNFPAPDNEDTILMKQSEMYDFSQVSSVPGWTVKDKTELVNALLEFSREIRKKHLISEIARLRRANKNENLLEITKLEREITQLNKKSLQDIALPLDQEYDWDALSNSLNRRHSAQEYRSLWKLFFHPSINKSNWSKTEHQQLQKIATRHNMQDWNRIAKELNSGRSGYQCFVYYRTNMIDITSSRKWTPEEIEYLQRVIDYFREGTYIPWGKVATAMDSRTKIQVYNKYTRMMEYRKGRFLEEEDVIILKCYQRYGPNFKKTAEYLPGRSTSQLRTRFNLLIKFRVSKTWTVQDDKLLIQVMANMGSNCNFAVAASYFPGKDRMHVRSRYITLMKWMKSHPATDISMAPRRGARRLVHGYADITLEEAVANLNRRIEAQVQAKKTKKITRFSPEEHIEHAIMTTLINENIKDEARQKAEGYETNEVCAHSLPKNSTLSENMTNMRKLLIFLRSVLNEDRFDTSKYSRLYPGFKEALPESSLLKVKSYSKIQGVKTIKMNLSPDVWGNLTLGNTQYVLPPNYATLTGCRVLMKHMSMRSEGRPEDEINLSLMARRNVFLKEALATLKERFTALFLWPVLLSNEGPPLTTTNEVYVPRIVPQVKYLPQPDGLTIPSPKKCHMLFGLGMKPNKKVEGASKGTTIDSPKRRRISSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00649961;
90% Identity
-
80% Identity
-