Eero022600.1
Basic Information
- Insect
- Ennomos erosarius
- Gene Symbol
- -
- Assembly
- GCA_963580505.1
- Location
- OY756998.1:10957472-10957843[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-11 5.8e-08 33.2 0.0 5 38 1 34 1 40 0.94 2 2 6.6 1.1e+04 -2.9 0.0 33 43 109 119 109 120 0.80
Sequence Information
- Coding Sequence
- ATGAAGAAagcaatagaaaaaataaaaaataaagaaatgggGTTCAGAAAAGCAGCCGTAACTTTCAAAGTACCAAAGACAACACTTAAACGACATTTTGAGCTCTATGATGAATCAAATGATCTAGATAAAGCAGTTGTAAAAAAAATGGGAAGATTTAAGCAGATCTTTACCAAAGAACAAGAAAAAGAATTGGTGGCTCTAGTAAAAGACATGGATGGGCAGACCACAAAAGATCTAAGGAGACTGGCGTATGATCTGGCTGAGAAAAATAGTTTGGATCATAATTTTGATCACGTCACCAAGACGGCTGGTACGTATTGGCTTGAAAACTTCTTGAAGCGAAATCCGGATTTAAGTTTAAGTACCTAA
- Protein Sequence
- MKKAIEKIKNKEMGFRKAAVTFKVPKTTLKRHFELYDESNDLDKAVVKKMGRFKQIFTKEQEKELVALVKDMDGQTTKDLRRLAYDLAEKNSLDHNFDHVTKTAGTYWLENFLKRNPDLSLST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -