Basic Information

Gene Symbol
kn
Assembly
GCA_963580505.1
Location
OY756991.1:5185478-5201742[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.5e-44 6e-40 138.0 0.6 182 249 22 91 10 96 0.94
2 3 2e-32 2.2e-28 99.8 0.1 335 387 97 149 89 152 0.96
3 3 5.6e-06 0.061 12.5 4.1 421 525 159 273 150 280 0.73

Sequence Information

Coding Sequence
ATGCGAACAGATGTGTTGTGCCTCAGGCGCCGCAAATACGTTCGCGCCAGCCCTGCGCATTGTACATTTTTCCTCAAATTCTTCCTGAAATGCAATCAAAACTGTCTGAAAAACGCTGGCAACCCTAGAGACATGAGAAGGTTTCAAGTGGTAATATCGACGCAAGTGATGGTGGATGGACCTCTGCTAGCGATATCAGATAACATGTTCGTCCACAACAATAGTAAACATGGCCGGCGGGCGAAGCGGCTCGATCCTACTGAAGGTACTGACGCTGCGCCTGAGACTACAGCTCTCAACGAACCCACGATAGATTACGGCTTCCAGCGGCTCCAGAAACTTATACCAAGGCACCCGGGCGACCCGGAAAAATTACCGAAGGAAATCATCCTCAAGAGAGCAGCTGACCTAGCCGAAGCCTTATATTCCATGCCTCGGAACAACCAGCTCGGTCTGGGTGGGCCAAGGTCTCCCCCTGCCAGCATGCCTTTCAACTCTTACTCCGGACAGCTAGCTGTCAGTGTCCAGGACACGGCTGCTTCGCAGTGGACTGAAGTGTCGCTAGGCCCGTACCACCCGGCGAACATGAATGGCCACGTATCTGACCATCACTATAACGCGTATTATACGAAAGATAGCGCGTATTACACTGAAAGAAATGCGGATTCTAAAGGCGCTGCTGACTGTCCGGCAAACACTCATACAAAATGCAGTGGCAGTGATATGAAAGGGGAAGGCGACAAAGGAGCAAAGAAGAGCGCTTTTGCGGTGGTGAGACAGAGTCCGCCAAGGGTGTCCAATGTTTCGCATCCTCAGAACTACAACTGGCAACTTGCAGTGCAGTGTTAG
Protein Sequence
MRTDVLCLRRRKYVRASPAHCTFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDAAPETTALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPASMPFNSYSGQLAVSVQDTAASQWTEVSLGPYHPANMNGHVSDHHYNAYYTKDSAYYTERNADSKGAADCPANTHTKCSGSDMKGEGDKGAKKSAFAVVRQSPPRVSNVSHPQNYNWQLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00825370;
90% Identity
iTF_00825370;
80% Identity
-