Basic Information

Gene Symbol
Arid2
Assembly
GCA_963580505.1
Location
OY756995.1:5174860-5219942[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-18 4e-15 56.8 0.0 2 89 17 101 16 101 0.92
2 3 9 3.3e+04 -3.9 0.0 72 86 592 606 579 606 0.74
3 3 4.2 1.5e+04 -2.7 0.1 27 62 1082 1117 1066 1158 0.55

Sequence Information

Coding Sequence
ATGGCTAAATCACAAATAAACACCAAATCCAGCAGCTATTTACGGGCTAAAGAGACTTTTTTAAAAGACCTCAGGCAGTTCAATGAAAGTAAAAATATTACAGTAAAACCCAGCATTGTAAATGGCATTGAAATTGATTTGTACCTGTTTTATACACTGGTGCAACAGAGAGGAGGAGTTGGCAAGgtGAACCAAAATGATGTGTGGGAAACATTTCTGCGACCCCTGCGCTTGCCACATCCCTGTATCAATGGTTCAACACTACTTCGAAGAATATATGCAACTCATTTGGAGAAgtaTGAAAGAGCCAAAGGTCCTCCGGGCCGGGATGACGATATGGATATGGACGAGGATCCGAGACGCGGACGCGGAAGCCATATGCCCCGAATTACATTCAGTGGTGGTACATACATTTCAGCATCAGGCGAAGCCCTTCGCACAGCAACTAAACCCAGCCCAGCCCCTTCGGAGAGGCTCGCCTTGTCTCTTCTATCACCAATGCCGAACGAGCAAGACTTTGCGGTCAACGTTTGTACGGTGCTGGCCGCAGATCATTCAAACAGACTGCCGTTGTCAACTACTCCGCACATACTGGACTTTTTGCTGGCACACGCTGGTGTTTATAATCATTCGAGCCTCCGCGAAACAATCGGCCGTTCGTACTACGAAACCCGAGGGAAGTACCCCGACGAGTTCTGGAGGCTCCGCGCCGGCGGCGGAGGCGCCCGGGAACTGGCAGACGAGACCAAGTTCATGCAGCATGGGATAGAACAGCCTGAGCTGATGGTGCAAGCCATGGCTGCTCATAACAACCTGACTGACTGTCTCATGAGGGATGGTTCTGATGATGAAGGCTCCGAGAAAGCTATTGTGGAATTGCAAGATATGTTAGAAGATTGGGTGACGGAGCCCTCAGAAGAAAGTTCCCTGTTCGCTCCGGAACTGGCTGGGGGAGCCTCCTGCGTTTACACTCAGCGGGTGCTTCAGATAGCTTCCATTGTCCGCTCGCTGTCCTTCCACGAGGAAAACGTGCAGTATCTAGCCAGGAATACTACTCTGATACGATTCCTGCTGCTCTGCGCAAACTGTTGGGTAGGAACGCTTCGACAGTCGGGGCTGGACACGCTTGGCAACGTTTCCACGGAACTTATTATCAAGgATCCAGCGACATGTCTGATTTCCAGACATATCCTGTCGACCATACAATCGGCGCTGGTGTCTCAGGACCGCGCGAGAGTGTTGGCTGCGTTGGAACTACTCAACAAGCTGTCTCAAAACGAGGCCAACGAAGACGCTCTCTTGCGGTCTTTGGAGTCTAAAGTATACCACGATGTTTGCGCCCTACTAAGTCTACGCGATATAATGGTATTAGTGTGCACGCTGGAATGTGTGTACGCGCTGACGTCACTGGGAGATCGGGCCAGCGAGGCGGTGGCGAGGGTGCCAGGACTGGTGCATACGCTAGTCTCACTTGTCACTGTTGAGGCGCAGAGCTACGGGCCCCGCGCTTGCATTCTGATGCGAGTGGTCGAGACAGTGAGTGGGCCGGCCGCATTGGCTGCCGTCGCAGAACAACCGCCACAGGTGGCAGCACCGAAGCCGGTGGCGGagccccccgcccccgcccccgcgccccccgccgccgccgcccccgcccccgcccccgtcTCCAACCTGCAACAGTCGCACATGCAGCAGAGAACTGTACAGGAAAACGAGCACTTCGCACAAGCGTGGCTTCGGTCGTCATTCGAGCCGTTACCACCACACGATAACAGCACGTTTGAAGTAAGCGAGTTGTATCGCCAGTACCTCGCCTGCTGCACTAAACTGGCTAGGAAGGGTGTCATCGCTCCGCAGCACTTTCCACGGCTTGTCAGGACCGTGTTCGGCGGCACAGTTGGTCCGAACACTGTAAGCACATCGACGGGACAAACGCATCAGGTGTACGTGGGTATACGATCGAAGAACCCGCAGAACAGAACCAATACTACTCCCGCAAGTCCTGCTTCACCAATTCTTAAGGCGACTTTGACGAGCAAAGCGGCCGCCGAAGCTAAGGCATCGGCGCAAACTCAATCACAGccGCAACAGCAACCGTCGCACCCGCATCTATCGCAAGCGCTGGAGTCGAACCAAACCAACACGACGCTGATCAAACATCTGCTCGCACACAAAGTAAGCCCAGCGACACAGCAAACGCAAGTAGCGCAAAGACAACAAAACCAACAAAGGGGACCTACTGGATCAAATACTGTTGTCGTGCAGCCAGCTTCACAGgCCATGGAGGTAGATCCCGAAGCTATGATCAAATGCACGGCCATTACACCCGGTGGTGTTGCCAGTATTACTCCCGCTGTGCAGGACAagATAATTGTCAATGCTGTCGAAGAGATCCTAGtTCCTAAAGAAGAGCCAGTGCAAATACAGATTGACGAGCAGTCGCAGTTGACGATCAAAACATCCCAAAACAAAATGCTAGCGGACCTTTTAGAAAAGAAGTCCAACCCTCCAGTCCAAGTGGTACAAATGGGCTCCTCAATCAACGCGCCTACCATACAGATCACAGAAACGGGACAAATAGTTCAAGTGAAGCCGGATCAGACGCCGGTTATACAGATTAACGAAGCTGGAGTCGTTTCACAAGGGAACCAGTTCTTccaaataaaaaatgaacaagGTCAACTGATCCAAATAAAAAACGATCAAGGTCAAATTATCCAGCTAAAAACGGATCAACTCCAGCAGCCGTTGCTTCAGTTCAAAAACGAACCACTTATGCAGATCACGTCAGAAAACCAAGTTGGCAAATTGCTGCAAGGTCAAGGCCAACTCATGCAAGGCCAACTGCTTCAAGGACAAGGCCAGCTGATACAGGGTCAAGGCCAAATTATACAAGGTCAAGGCCAGCTGATACAGGGTCAAGGCCAATTGATACAGAGTCAAGGCCAACTGGTGCATGTTCAAGGTCAACAGTTGCAAGGTCAAGGTCAACTGATACAAAGTCAAGGACAACTGATGCAAAGTCAAATGCAGCTCAAAGTGGACAAGGACATCGTCGAGCAAGTTGTAACTGATCATTCTTATACAGAACCGCCGACAAAAAGAATGAAAGTTGAGGACAAGAAAGATACACCGCCGCCACAAGAAAGCGTCTCCAAAACTGCAGCCAACTTATATGCAGCTCTCGCGGCCTCGGCATTAGAAGATGAAGAAGATTTGCTAACTCCGCCGCCGCAGCCGAAACAAGAGCCAGTTGAGGTAATGCAATCATCTGTTTTAGTTACTGGATCAGGTAATAACGCGAATGTGGTGGTACAAAAACCCATTTTACAGATGCATCAACCGACAATGGTGCAGCAGCAGTCCATGCAAATACAACAACCGTCGTTGCAAGTGCAAGGGAATACgatacaaATGCAACAACAAACAATGCAAGTGCAACAACCGATGCTGCAAGTGCAACCGATGGATGTCCAAAACATAATCGCTTCGCAATCCGGACAGATCATACTTCAAGAGAAATCAATTTCGACGCAACCCCAATACGTACAACAGCCAATGCAGATTATCGCTACCCCAAACACTTCACAAGGAGGTCTCAGCTACATAACGCagaatatacctactaatatgATGCAGAAGACTATCATAATCGTCCAAGGCCCTACCGGTGGAGGACCTCTCACTCTAACAGTGAACAACCCGGGCGGTCTGGACGAGGCGACGCTAAACAGCCTTATTACCCAGGCAACAGAGGCGATAACGCAACAGCAAATCATACAGAACACGGGGATGTTACAATCAGGACAACGCGTGATTATACCGCAACCGAGTCTAGTCAGCACTTCTCAGCCGAGCTCTTCGAACACCGGGATCATACAATCTACGCAACGGGTTATAATGCAACCGACGCTCGTCAGTTCGTCTCAGCCGACTTCTTCGAGTACCCCTCAAATAACGACGAGTCAGCAACCGATGATAACGACGCAACCTCAGCCGCATAAAGCGCAAATAGTGAACCAACCTCAGCAGATCGTAGTAACGCAAAAAAACCCGCCGGCTCTCATTAGCACGTCATCGAGCAGCCCGCAAATTGTAGTGTCAAACAACCAGCAAATAATAATGAACGCGCCATTGAAAACCGTCGGGCATAGAGTGGTGCAACCGCAGCGAACGCAAGTTATAAACGTGCAGAATCAAGCTCAGGATATCAAGAGTACAGCGAAATCCCAGCAACCGTTGATCCGGCAAGTGATTTCCCGACAACCGATCATGGTTGGTAATACGAAGATCGGTGACAAAGAAACGGTGGTCAATCAGTCCGTTATTGAGGTGCCGTCGCAGTCGCCTTCAGCAGTAACCAAACCCGCTCCTTCGGCGACGCCGCCGCCACTTCAACCCACTACGCCGCAAGAGGACACCCCTTGGATATGTCATTGGCGGGGGTGTGGGAAAGCGTGCAGCAGCGCGGCGGATGTGTTCGCGCACTGCGCGCGCGCGCACTgcccgggcggcgcgggcggggagGCGGCGTGCCTGTGGCTCGACTGCGACCGCGTGCCGCGCCGGACCTTCGCGCTGCTCAACCATCTCACCGACAAGCACTGCTCGCCTACCGCCCTGAAAGCGATATACAATTCAAGGCGGAACGCGGCCGCGGAAGCGGAAGCAAATAAACCGGTTTCTCTCGGATACCCGCCTAATGCAGCACTAGCAGCGTTGAACAAACACGCCGCTGATATGTTCAATCCTAGAGAACTCATGGATGAAAACGAAGGTCCAGTGACTAAAAGCATCAGATTGACGGCAGCACTCATATTGAGGAATATCGTGATCTACTCAAACACTGGGAGACGGCAACTCCGCTCTTACGAGGCGCACCTCGCTTGCATCGCGCTCAGCAGCGTAGAAGCTTCCAGAACAATCGCCCAAGTACTATACGACATGAACAACATCTGA
Protein Sequence
MAKSQINTKSSSYLRAKETFLKDLRQFNESKNITVKPSIVNGIEIDLYLFYTLVQQRGGVGKVNQNDVWETFLRPLRLPHPCINGSTLLRRIYATHLEKYERAKGPPGRDDDMDMDEDPRRGRGSHMPRITFSGGTYISASGEALRTATKPSPAPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRETIGRSYYETRGKYPDEFWRLRAGGGGARELADETKFMQHGIEQPELMVQAMAAHNNLTDCLMRDGSDDEGSEKAIVELQDMLEDWVTEPSEESSLFAPELAGGASCVYTQRVLQIASIVRSLSFHEENVQYLARNTTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKDPATCLISRHILSTIQSALVSQDRARVLAALELLNKLSQNEANEDALLRSLESKVYHDVCALLSLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPAALAAVAEQPPQVAAPKPVAEPPAPAPAPPAAAAPAPAPVSNLQQSHMQQRTVQENEHFAQAWLRSSFEPLPPHDNSTFEVSELYRQYLACCTKLARKGVIAPQHFPRLVRTVFGGTVGPNTVSTSTGQTHQVYVGIRSKNPQNRTNTTPASPASPILKATLTSKAAAEAKASAQTQSQPQQQPSHPHLSQALESNQTNTTLIKHLLAHKVSPATQQTQVAQRQQNQQRGPTGSNTVVVQPASQAMEVDPEAMIKCTAITPGGVASITPAVQDKIIVNAVEEILVPKEEPVQIQIDEQSQLTIKTSQNKMLADLLEKKSNPPVQVVQMGSSINAPTIQITETGQIVQVKPDQTPVIQINEAGVVSQGNQFFQIKNEQGQLIQIKNDQGQIIQLKTDQLQQPLLQFKNEPLMQITSENQVGKLLQGQGQLMQGQLLQGQGQLIQGQGQIIQGQGQLIQGQGQLIQSQGQLVHVQGQQLQGQGQLIQSQGQLMQSQMQLKVDKDIVEQVVTDHSYTEPPTKRMKVEDKKDTPPPQESVSKTAANLYAALAASALEDEEDLLTPPPQPKQEPVEVMQSSVLVTGSGNNANVVVQKPILQMHQPTMVQQQSMQIQQPSLQVQGNTIQMQQQTMQVQQPMLQVQPMDVQNIIASQSGQIILQEKSISTQPQYVQQPMQIIATPNTSQGGLSYITQNIPTNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLITQATEAITQQQIIQNTGMLQSGQRVIIPQPSLVSTSQPSSSNTGIIQSTQRVIMQPTLVSSSQPTSSSTPQITTSQQPMITTQPQPHKAQIVNQPQQIVVTQKNPPALISTSSSSPQIVVSNNQQIIMNAPLKTVGHRVVQPQRTQVINVQNQAQDIKSTAKSQQPLIRQVISRQPIMVGNTKIGDKETVVNQSVIEVPSQSPSAVTKPAPSATPPPLQPTTPQEDTPWICHWRGCGKACSSAADVFAHCARAHCPGGAGGEAACLWLDCDRVPRRTFALLNHLTDKHCSPTALKAIYNSRRNAAAEAEANKPVSLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEAHLACIALSSVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00033606;
90% Identity
-
80% Identity
-