Basic Information

Insect: Endotricha flammealis
Gene Symbol: -
Assembly: GCA_905163395.1
Location: LR990880.1:8563298-8569695[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.15 12 7.4 0.0 2 23 204 225 203 225 0.96

2 10 0.0024 0.2 13.1 6.5 1 23 231 254 231 254 0.97

3 10 5.6 4.7e+02 2.4 0.5 1 14 266 279 266 288 0.66

4 10 0.00039 0.033 15.5 6.4 1 23 531 553 531 553 0.98

5 10 7.3e-05 0.0062 17.8 3.5 2 23 559 581 558 581 0.97

6 10 0.00031 0.026 15.8 6.4 2 23 590 611 589 611 0.96

7 10 0.015 1.2 10.6 1.6 2 23 650 672 649 672 0.96

8 10 2.6e-05 0.0022 19.2 1.0 1 23 678 700 678 700 0.98

9 10 0.00044 0.037 15.4 1.7 3 23 708 728 707 728 0.97

10 10 9.8e-05 0.0083 17.4 1.6 1 23 734 757 734 757 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.15	12	7.4	0.0	2	23	204	225	203	225	0.96
2	10	0.0024	0.2	13.1	6.5	1	23	231	254	231	254	0.97
3	10	5.6	4.7e+02	2.4	0.5	1	14	266	279	266	288	0.66
4	10	0.00039	0.033	15.5	6.4	1	23	531	553	531	553	0.98
5	10	7.3e-05	0.0062	17.8	3.5	2	23	559	581	558	581	0.97
6	10	0.00031	0.026	15.8	6.4	2	23	590	611	589	611	0.96
7	10	0.015	1.2	10.6	1.6	2	23	650	672	649	672	0.96
8	10	2.6e-05	0.0022	19.2	1.0	1	23	678	700	678	700	0.98
9	10	0.00044	0.037	15.4	1.7	3	23	708	728	707	728	0.97
10	10	9.8e-05	0.0083	17.4	1.6	1	23	734	757	734	757	0.97

Sequence Information

Coding Sequence: ATGGAACAAGATGAATTTTCCGAGTTTTTAATCACAAAACGTTCTGAAAATGTTAAATCATATTCTAAATTAAATGCAAATAAAGTTAATTTTGATAATAATGTGCCTTTATACACAAAAAAAGCGGTGGAATTATTATTACAAGGCACACTGAAGAGTAAAGTATGTCGCTATTGCTTGCGTATTTGTACCTCGTTGTACGAAATGGATCAACTTTTCTATATTGGTGGTCAAGTAGCTTCGTATAAAGTGACTGTGCAAGACATGATTGCCAGTATCCATCCATTTAAGGTGATTGATGATCCGAATTTTCCAAATAAAATATGTAACAAATGTTTGAATACCATGATAAGTTCATATCTATTCTCTCAGCAATGTGAGCGAGCTGGGCGAGCTCTTCGCAATTGTTTTGATGATATATACGAAAAATTAGATAAACTAGATCCACTGGAAAAAGTCAAGAGACGTGGCAGACAAAAACTTAATCCAAACCACAACATACTGTATACCGAACATCATAAAGTTATTGATTACGCTGATCCGATTATCAATATTATAAATCGAGGATCTGAAACAATAGAAGAAAGCAATACTAAAATCAATGAACTAGAATGTCCGAAATGCTGGGAAATTCTACCCAATGTAGAATCGTTGGTTAACCATGAGAAAATACATCCAAAAACCATGTGGTTTCATTGTCGTTTATGCGGACAATCTTATCCCAAACGCAGTCATTATAAAAAACATGTTAAGACATCTCATTTTAAATGTAAAGAGATGATAACAAAAACTGATTTTGAATGTACAGACTGTGGAGTTATTAGTGAGGTTTACGACAAACATTTACAGCACATTGAGAAACATAAATTTCAAACAGTATTAGAGCATTTGGTTGAGAGTAAGATGGATAAACTATGTGTTGTATGTATGAATAAAGGTTTCAAAATGATTGATTTGGAAAAAAAGATAAATTTACATGGCGGATGCCCCGAATTGACTGGACAAAGGAATATTTACAATATTTTGGGATCTACAATACCAGAAATGAACCCCTTATACACATACACAGGAACAAAAGTTTGCGATGTATGTCTTGATCATGCCTTAACATCCTATATTTTCGTAAATCAAGCTCACTATATCAGAAACAGATTAAACACTTGTGTTAATCTCATGTTAGATAACTTAAACAAAATTGGTGAACCTGAAGGGAAGGTATTTATAGAAATCTCACAAGATATGATTTTACCAGCTAAAGAAGCTGATTTTGATGAAAGCCTTATTGATGATGAATGTGATGAAACGAAACTTAAAGTTGACGTTTTGGAGGATGAATTTAGAATAAAATCCGATAGTGAACTTAGTGATGCAGAAACTAAGATTAAAGATTTAGATTCTCCACTAGCAGATTCGTTAGATCATATTGAAAATCCAGCTAAAAATGCTAAAAGAACGTACACAAAAAGAAAACTGGTTAATGGTTTACAATCATGTCCAGAGAAAACTTTTAAAGAATTAAACAATGTTTGTAGTGAATTTTTGACTTTCAAAAAGAAAAGAAAACCAGTTAAAAGTAACTTCAATTGCAAATACACTTGTCATTTATGCAGCAAGCACTTTATTACAGAATATTTCCTTAGAAGGCATATATTAAAACATGCTCCTATGAGAATGGAATGCAAGATTTGTAAGAGACATTTCAAATCGAAGTTTTACTTGTACGAACATATGAGAATGGTACATTTATTAAGAAAGACTAGCTTCTGCTCATGCAATCATTGTGGACGATCTTTTGTAAGTTATAGTAAGTTAATGAAGCATTCAAAATCTCATAAAAATAAGGAATGTCAACTATGCAATAAGTTATTCTTAACACAGCAACATCACGACAATCATATGCAAAGGCATGTATATAATTTAAAAGCTTATAAAGACAGACAAATACAAACGTGTAGTTTCTGCGAGAAAGCTTGTTCCAATGATAACAACCTATCAGTTCATGTTAACAAAGTACATTTACAGATAAAACCTTACAGTTGTGACATGTGTGAAAAACAATTTTATACGGAATCAAATATGAATGCTCACAAAAGGGTTCATAGTATGTTCGTGAAGGAAATATGCACTTTTTGTAATAAAACATTAAAATCTAGGAAGAACTTGGTGATACATGTACGGAAACATATAGACGTAAAGCCTTATAGTTGTCAAGTGTGCTCGATGGCTTTTTACTCGCAAACAAAACTGAAAAGTCACATGAAAGTGTATCATGGAGTCAGTTCGACGGAGGACGCGGTCCGCTGTCGCACAGATTGGTCCGCCACCGAACCAATCAAATCGCGAGCGACGAACTGGGTCGGCTACACGATCGAACTTGGTCTGCTGCCGGACGGTTCGATGGTGCGGTGTGATGGCGTGTTCGATCTTCTGGCAGCACTATTACACCGTACTATAAATCCGTGGTGTAAAGTTACAATTTGCAATGGAGTCGGTTTATTAGCATAA
Protein Sequence: MEQDEFSEFLITKRSENVKSYSKLNANKVNFDNNVPLYTKKAVELLLQGTLKSKVCRYCLRICTSLYEMDQLFYIGGQVASYKVTVQDMIASIHPFKVIDDPNFPNKICNKCLNTMISSYLFSQQCERAGRALRNCFDDIYEKLDKLDPLEKVKRRGRQKLNPNHNILYTEHHKVIDYADPIINIINRGSETIEESNTKINELECPKCWEILPNVESLVNHEKIHPKTMWFHCRLCGQSYPKRSHYKKHVKTSHFKCKEMITKTDFECTDCGVISEVYDKHLQHIEKHKFQTVLEHLVESKMDKLCVVCMNKGFKMIDLEKKINLHGGCPELTGQRNIYNILGSTIPEMNPLYTYTGTKVCDVCLDHALTSYIFVNQAHYIRNRLNTCVNLMLDNLNKIGEPEGKVFIEISQDMILPAKEADFDESLIDDECDETKLKVDVLEDEFRIKSDSELSDAETKIKDLDSPLADSLDHIENPAKNAKRTYTKRKLVNGLQSCPEKTFKELNNVCSEFLTFKKKRKPVKSNFNCKYTCHLCSKHFITEYFLRRHILKHAPMRMECKICKRHFKSKFYLYEHMRMVHLLRKTSFCSCNHCGRSFVSYSKLMKHSKSHKNKECQLCNKLFLTQQHHDNHMQRHVYNLKAYKDRQIQTCSFCEKACSNDNNLSVHVNKVHLQIKPYSCDMCEKQFYTESNMNAHKRVHSMFVKEICTFCNKTLKSRKNLVIHVRKHIDVKPYSCQVCSMAFYSQTKLKSHMKVYHGVSSTEDAVRCRTDWSATEPIKSRATNWVGYTIELGLLPDGSMVRCDGVFDLLAALLHRTINPWCKVTICNGVGLLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -