Basic Information

Gene Symbol
ZFY
Assembly
GCA_905163395.1
Location
LR990881.1:8697186-8699939[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0001 0.0086 17.4 3.0 2 21 163 182 162 183 0.94
2 10 4.4e-05 0.0037 18.5 0.6 1 23 216 239 216 239 0.96
3 10 0.001 0.087 14.2 1.8 2 23 245 266 244 266 0.95
4 10 0.087 7.3 8.1 2.2 2 21 270 289 269 290 0.92
5 10 0.0037 0.32 12.4 0.0 2 23 334 356 333 356 0.95
6 10 3 2.6e+02 3.3 0.6 3 23 364 383 362 383 0.79
7 10 1.9e-05 0.0016 19.7 0.8 1 23 391 413 391 413 0.98
8 10 0.00017 0.014 16.7 0.6 1 23 419 442 419 442 0.98
9 10 0.029 2.4 9.7 0.1 3 23 452 473 451 473 0.97
10 10 0.027 2.3 9.7 8.2 1 23 480 502 480 502 0.98

Sequence Information

Coding Sequence
ATGAGCAGAGAAGTAGATATTAAGGCGTTAGTATCGCACATCGTACTTGGAAATGGTATGGATAAGTGTCGAATTTGTATGGGAGACACAACGGATGGCCAGGTGTACCTTGGAGACACGGTCATGACTGAGGGGGACAGGCCTGTGACCCTTGGAGACTTACTGGAAATCCTTACAGGAGTTGAGGTTCATATCCAAGACGAACTGCCATCAGGAATCTGCTCAAACTGCTGCCGTTCCACGCTGAATGCTGCCGAGTTCCGTGAACTATGTCTGCTATCTCGAGAACAATGGGAGAATAATATCAACATGCTCGGAGACTTACCGATGAGCCAAAAGAAATCCATGTTTATTTTGCTAAACAATAATAAACTGACAGTTATAGATGAAACGAGACAAGCGAAGACAGGTAAAGAGGCAGCCAATAAACTGACAGAAAGATTGACAAAGAATAAAAGACACAAATATATTAAGAGTAAAAAGTGTCAATGTCCAACGTGCGGTAAAAAGTTCTCATATGCTCAACATTTGTTTGAACACTTAAAACAGTCAACGGACTTGATAAGAGCGTGCTATGTGTGCACAGAAATCATGACTCGAGATGAATTAGTGGTACATTTGAGTAAAATACATGGTAGGACTCCGTATGACTGTAAGAAGTGTCCGGCAATATTTAGAACATCCAATCAATATACAAGACATTTGCAAGTGGCACATACGTCCGGTGCTTGTACTTGTGGTGACTGCGGACGTAACTTTCCATCTAAGCATGGTTATTATGCTCACGTATCTATACATTCTTTGAAAACCTGTCCGGGGTGTGATAGTAAGTTTCGGAATCAAACCTGCTATTTATATCATGTTAAAAGATGCTGTAAATTAGATAAAAATAGTCAGGAATTGATCAGAACTAAACATAAAGTAACCATTAAGGTTAATAATGAGAAGACTAAACGTAAAGTCAAGGTTGGTATGCGAGGAAGCGCAGACAAGCAATGCTACTGCGATTACTGTGGTAAAGAATATGCAGGAAAGAAATTTGTCGCAGCACACATACAAATAGTACATATGAGAACCACACACAAGCCATGTATGTATTGTGGGAAGGAATTGGCTTCAGCACGAATGACTGAACATTTAAAAACACATGAAAATAACCAAATAAACAGCTATACTTGTGAGTACTGCGGCTATGTGTTCAAAAGTAAGTTAGGTTATGTACAACACCTTCGTTTACATACAGGAGAGAGACCTTATACTTGCAAACAATGTGGAGAGAGTTTTTCAGCTTCTTCTAGACGTTCAGCGCATATAAGAAAAGTTCATAATACGGAGACGGTCCTTAAGCATGGCTGTAATTTGTGCTCGGCCAGATTTCAACTACCTTATATGCTAAGAAAGCATATAGCATCAGTCCATCAGCGGAAATTAACGTCATTCGAATGTAACAAATGCCATGAGAAGTTTATTAGTTGCAGAGGGTTGTTGCATCACAGCAGGAAGCATCAGAAAATGGACGTGGAATTATTGACTAATTTAGATATGGATTCATTTAAATATTAA
Protein Sequence
MSREVDIKALVSHIVLGNGMDKCRICMGDTTDGQVYLGDTVMTEGDRPVTLGDLLEILTGVEVHIQDELPSGICSNCCRSTLNAAEFRELCLLSREQWENNINMLGDLPMSQKKSMFILLNNNKLTVIDETRQAKTGKEAANKLTERLTKNKRHKYIKSKKCQCPTCGKKFSYAQHLFEHLKQSTDLIRACYVCTEIMTRDELVVHLSKIHGRTPYDCKKCPAIFRTSNQYTRHLQVAHTSGACTCGDCGRNFPSKHGYYAHVSIHSLKTCPGCDSKFRNQTCYLYHVKRCCKLDKNSQELIRTKHKVTIKVNNEKTKRKVKVGMRGSADKQCYCDYCGKEYAGKKFVAAHIQIVHMRTTHKPCMYCGKELASARMTEHLKTHENNQINSYTCEYCGYVFKSKLGYVQHLRLHTGERPYTCKQCGESFSASSRRSAHIRKVHNTETVLKHGCNLCSARFQLPYMLRKHIASVHQRKLTSFECNKCHEKFISCRGLLHHSRKHQKMDVELLTNLDMDSFKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
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80% Identity
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