Basic Information

Insect: Endotricha flammealis
Gene Symbol: -
Assembly: GCA_905163395.1
Location: LR990879.1:563543-585036[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.4e-05 0.0054 18.0 0.3 2 23 51 72 50 72 0.98

2 15 0.019 1.6 10.2 4.1 1 23 78 100 78 100 0.98

3 15 0.00047 0.04 15.3 4.1 1 23 105 127 105 127 0.97

4 15 0.0084 0.71 11.3 2.6 1 23 133 155 133 155 0.90

5 15 0.00084 0.071 14.5 3.7 1 23 161 183 161 183 0.98

6 15 0.00026 0.022 16.1 2.7 1 23 190 213 190 213 0.93

7 15 9.5e-05 0.0081 17.4 2.2 1 23 221 244 221 244 0.91

8 15 0.0077 0.65 11.4 0.6 2 23 251 272 250 272 0.96

9 15 0.00017 0.014 16.7 3.2 1 23 278 302 278 302 0.98

10 15 2.9e-05 0.0024 19.1 0.3 2 23 309 330 308 330 0.97

11 15 8.7e-05 0.0074 17.6 1.2 1 23 339 361 339 361 0.98

12 15 0.12 10 7.7 1.5 1 23 368 391 368 391 0.95

13 15 0.0097 0.82 11.1 3.4 3 23 399 420 398 420 0.93

14 15 2 1.7e+02 3.9 1.9 2 23 633 654 632 654 0.91

15 15 0.011 0.89 11.0 2.3 1 23 813 835 813 835 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.4e-05	0.0054	18.0	0.3	2	23	51	72	50	72	0.98
2	15	0.019	1.6	10.2	4.1	1	23	78	100	78	100	0.98
3	15	0.00047	0.04	15.3	4.1	1	23	105	127	105	127	0.97
4	15	0.0084	0.71	11.3	2.6	1	23	133	155	133	155	0.90
5	15	0.00084	0.071	14.5	3.7	1	23	161	183	161	183	0.98
6	15	0.00026	0.022	16.1	2.7	1	23	190	213	190	213	0.93
7	15	9.5e-05	0.0081	17.4	2.2	1	23	221	244	221	244	0.91
8	15	0.0077	0.65	11.4	0.6	2	23	251	272	250	272	0.96
9	15	0.00017	0.014	16.7	3.2	1	23	278	302	278	302	0.98
10	15	2.9e-05	0.0024	19.1	0.3	2	23	309	330	308	330	0.97
11	15	8.7e-05	0.0074	17.6	1.2	1	23	339	361	339	361	0.98
12	15	0.12	10	7.7	1.5	1	23	368	391	368	391	0.95
13	15	0.0097	0.82	11.1	3.4	3	23	399	420	398	420	0.93
14	15	2	1.7e+02	3.9	1.9	2	23	633	654	632	654	0.91
15	15	0.011	0.89	11.0	2.3	1	23	813	835	813	835	0.98

Sequence Information

Coding Sequence: ATGAGGGTAGACTTTCAAGATCTGCCTTCAGAGGAGATAATGAGGCAGAATCTGAAGTCTCGCTTGAGGAAGTCCAAACCAAACAAGAGGTTCATAGATTATGACGAAGATGAGGACGATGAGGACAATGAGAAACCGGTGAAGACTGTCAAATGTAAAATATGTGGAAATAAATTCGTTGACGTATATGGACTACGTACTCATATGAAGATACACACAAACACCGAGTTATTTTCATGCACACTATGCAGCTATCAAGGGAAGACGCAGAAATACTTAACGAGACATTTTAGAAGGCACAAGGAACCGACGCACGAGTGTCGAGTTTGCGGGAAGATGTACCATTTTAAATCTAAACTAACTGATCATATGATGGTTCATACTGGCGAGAAACCCTATACCTGCAAAGTATGCGGAAAAGCATTTCGAGCGAAGTACTCCTACGATTCACACTGCATGATACATACAAATACAAAACCCTACAAATGTATGTACTGCGCGTACGCATGTAGAGATAATTCGACGCTGCGCAAGCATCAGGAGCGGCACATGGGTAGGCTCAAGATGTACCAGTGCACTTACTGTGTTAAAAGATACGATTCGAAGTCGCACTTAAAGGATCACGTCGCGCTAAAACACTTTTCTGTTGACGTCAGAATGCACGAGTGCCTTCAATGTGAAAAAAAGTTCAAGAATAAAAACAATTTAAAAAAACATGTGGAAGCCATTCACGACAGATCGATGCGATGCAAGTGCGACATCTGTGGGCAAGAATTGACAAACAGGCTCAATCTACCCGCGCATTTGAGGTCACATATCAACGTTAGACCATTCAAATGCTCATATAAGAAGTGCCGGAAGAAGTTTAAAGATAAAGGAGCGTTAAAACGACACGAGATAACTCACAATCCCGCACGACAGATCCCGTGCCCGTTGTGCGACAAATTGTTCGCACGACGCACGCGATTGAATTCGCATATGCGTATGCACGGAATAAATAAGGGCTTGAAGCGGTTTCAATGCGATCACTGTGGTATGGGATTCAACCAAAGAGATGGCATGGTCAGACATATTTATAAACATATGTATAATAGACATACGTATGTCTGTGAGATTTGTAAGTTTGTTACACATAGAAAGAACTATATGGCATTACATATGACTTATGGACATGGACCTAGTGATGATTTATTGTGTAGAATCTGCAACAAAACGTTCAGATTACACTCAAAGTTGACTGCACATTACTACAACAGACACAACGTGGCCTACAGGACCGTAGAAACCATTAAAACTGAAGACCCCATCAAAATAAAGGAAGAGCCTGGAGAGCCTGTGCCCGACTTGGAAATAGACTTGTTCGAGGTAGAGAAACACGAACCATTTATGGACATGAACCTGGACTACGAGGATACATACTCCAAGACGGTATTGACAGAAGACGTGGTCAGCAGCATGTGTCACAGTGCAGAGGGACCGGAGAAGGTGATCGACGACCTTTTTAGAGATACCCTCACTGAGAAGACCGCTGAGTGCATGGAAGTTGAAAATTCAGAAATAAACCTTGACAAAGATAAAGAAGAGTATGTGAGACGGAAAATAAAAAAGATGTTAGATAGAGGGAGACAAAAAGAGATGTTGAGCGCTATAGATGAAATGAGACAGATATACAACGAGAGAATCCGAGCTATGATGAATAGTAATATTGAAAAAGAAACCCTAAAAATAAAATTCATTAATATGAACAGGGAAAAAACAGATCACAATAAAAACACATCGGAGCAGGACAACGAAATAAATAGTAAGGCGAATGAGGGAGACGGCAATATTGATACGAGTGAAAAGGACAGCAATAGAAGGAAAGAGACAAATTGCAAATTGAAAATTAATATGCAACAATGCCATATTTGTTATCAGCTTTTCGAATCAGAAGCGAAACTTATCGAACACTGTCAAATCCATTTCGATATATGCAGTTATGTCAGTTTAAAAAAATGTCCACTATGCGAATACGTAACGAATTTAACAATCACGAAACACTTGAAAAACAAACACAACATAAACATAAACATACCCTACCAGAGAGTGTGTGAGAAAAATAAAAACTCACAGAAATCCAAATACTTCTACGACGTTAACAGCAGTTTGGTTAAAGAAATAGAAATTATTCCCAGTATAAAAAACCTAAATAAAATAGCAGGATGTAAAATCGATAAGAATAACCGTAATAATAAAAATAAATTCATAGCCAAAACTAAATTAGTCAAAAAAGGTAATGAATGGGTTGTTGTCAATGAGAAAATTGATTTGAGTGATATAAGCAGATATATATTACCTAAATTTGATGATATTAACGTAAAAGATATAGGTAGCACGTATTTAACTAAACTACAAGTACTGAGTCACATTGCCAAAAAGAAGGGCATGGATTTCTTATATCCCTGTGAAAATTGCGAAAAGATATGCCAGACATTCAGCGCTTTGAAGTTACATAGTAGAAAACATGAGAGAAATCCTAAACCTTTCAAAAAGAAAGTGTGGAAACACAGAAAGGTTTTATCTAAAGGTAAAAATAAAAAGGAAGCAAAAATACTGGAATCCGGAGCTGGGAATTTAAAAAGTCAAGCTAATAAACGTGTATCCAGAGATAAAAATTTAAAAAGATATAACACAGAAGCGAAAAACGTAGTATCCAAAGCCGATAAGAACAATAGGTACGAAAACCCCAAACCTATTGTTAATAATCATAAATGCGATGAGAAATTAAAGGAATTTTACGAGAATAACATTAAAGGTGGTGATATTGAATTCTGGCAGTTTTTAAAAATTTATAATAAAATGGATAGGGAACAAATTACCGATTTTAAAGATCTCGAAAATCGTACAGATTTCGGGATACATATACCTGATAAAATAGAAGAAAATACACATAAAATTACTAATAAAAACATCAAAAATAATATTAAAACTAATAAAATTTGTAAAATTAAAAATGTTATGGTTAAAAGTAAAAAATATATAGGAAATAAAATAAATAAGAAATATGTTAGGAAGATTTTTATAAGTAAAAATGAATATATGATGAGGTTGCAACGTATAGAGATGTTGAGAAAGAAAATGGCTGAAGAAACTTCTGGAAATTAA
Protein Sequence: MRVDFQDLPSEEIMRQNLKSRLRKSKPNKRFIDYDEDEDDEDNEKPVKTVKCKICGNKFVDVYGLRTHMKIHTNTELFSCTLCSYQGKTQKYLTRHFRRHKEPTHECRVCGKMYHFKSKLTDHMMVHTGEKPYTCKVCGKAFRAKYSYDSHCMIHTNTKPYKCMYCAYACRDNSTLRKHQERHMGRLKMYQCTYCVKRYDSKSHLKDHVALKHFSVDVRMHECLQCEKKFKNKNNLKKHVEAIHDRSMRCKCDICGQELTNRLNLPAHLRSHINVRPFKCSYKKCRKKFKDKGALKRHEITHNPARQIPCPLCDKLFARRTRLNSHMRMHGINKGLKRFQCDHCGMGFNQRDGMVRHIYKHMYNRHTYVCEICKFVTHRKNYMALHMTYGHGPSDDLLCRICNKTFRLHSKLTAHYYNRHNVAYRTVETIKTEDPIKIKEEPGEPVPDLEIDLFEVEKHEPFMDMNLDYEDTYSKTVLTEDVVSSMCHSAEGPEKVIDDLFRDTLTEKTAECMEVENSEINLDKDKEEYVRRKIKKMLDRGRQKEMLSAIDEMRQIYNERIRAMMNSNIEKETLKIKFINMNREKTDHNKNTSEQDNEINSKANEGDGNIDTSEKDSNRRKETNCKLKINMQQCHICYQLFESEAKLIEHCQIHFDICSYVSLKKCPLCEYVTNLTITKHLKNKHNININIPYQRVCEKNKNSQKSKYFYDVNSSLVKEIEIIPSIKNLNKIAGCKIDKNNRNNKNKFIAKTKLVKKGNEWVVVNEKIDLSDISRYILPKFDDINVKDIGSTYLTKLQVLSHIAKKKGMDFLYPCENCEKICQTFSALKLHSRKHERNPKPFKKKVWKHRKVLSKGKNKKEAKILESGAGNLKSQANKRVSRDKNLKRYNTEAKNVVSKADKNNRYENPKPIVNNHKCDEKLKEFYENNIKGGDIEFWQFLKIYNKMDREQITDFKDLENRTDFGIHIPDKIEENTHKITNKNIKNNIKTNKICKIKNVMVKSKKYIGNKINKKYVRKIFISKNEYMMRLQRIEMLRKKMAEETSGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -