Basic Information

Insect: Endotricha flammealis
Gene Symbol: -
Assembly: GCA_905163395.1
Location: LR990867.1:1987417-1997364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0072 0.61 11.5 2.2 1 23 264 286 264 286 0.98

2 12 3.1e-05 0.0026 19.0 0.4 2 23 294 315 293 315 0.94

3 12 0.0077 0.65 11.4 0.4 1 23 319 341 319 341 0.98

4 12 0.0011 0.094 14.1 1.2 1 23 346 369 346 369 0.98

5 12 0.00093 0.078 14.3 0.2 1 23 373 396 373 396 0.95

6 12 0.0094 0.8 11.2 0.1 3 21 417 435 416 440 0.91

7 12 0.012 0.98 10.9 0.5 3 23 450 471 450 471 0.93

8 12 0.23 19 6.8 0.7 3 23 492 513 491 513 0.96

9 12 5.8e-06 0.00049 21.3 0.5 1 23 524 546 524 546 0.99

10 12 2.3e-05 0.002 19.4 5.6 1 23 552 574 552 574 0.99

11 12 0.002 0.17 13.3 2.5 1 23 580 602 580 602 0.97

12 12 5.3e-05 0.0044 18.3 0.2 1 23 608 631 608 631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0072	0.61	11.5	2.2	1	23	264	286	264	286	0.98
2	12	3.1e-05	0.0026	19.0	0.4	2	23	294	315	293	315	0.94
3	12	0.0077	0.65	11.4	0.4	1	23	319	341	319	341	0.98
4	12	0.0011	0.094	14.1	1.2	1	23	346	369	346	369	0.98
5	12	0.00093	0.078	14.3	0.2	1	23	373	396	373	396	0.95
6	12	0.0094	0.8	11.2	0.1	3	21	417	435	416	440	0.91
7	12	0.012	0.98	10.9	0.5	3	23	450	471	450	471	0.93
8	12	0.23	19	6.8	0.7	3	23	492	513	491	513	0.96
9	12	5.8e-06	0.00049	21.3	0.5	1	23	524	546	524	546	0.99
10	12	2.3e-05	0.002	19.4	5.6	1	23	552	574	552	574	0.99
11	12	0.002	0.17	13.3	2.5	1	23	580	602	580	602	0.97
12	12	5.3e-05	0.0044	18.3	0.2	1	23	608	631	608	631	0.98

Sequence Information

Coding Sequence: ATGGAGTCTACAAAAGTTTGTCAGATTTGCCTTGTAATGGATGTTAGGATGTTTGATGTGCGAACATACCCATTGGTGAAATATTTTGAAGCCGTTCTTCAAGGAAATTCTTATAGGAACATGTTGCTCCCACCGTACATCTGCTACGAGTGCAATGCCTTAGTAAGGAAGTTCTATTTCTTCAAGGAGAGATGCACCAAGGGGCAGGGTGCTTTATACAATATGTTGTATATGTCAGGGGAGACACTATTGGAAAATAACCTAGCAATACAGAGACATCAGCTCCAACTTAACTTAAACTTATCAACAAGCAAACAGTCAGAAATTGATATAATCGAAATACAAGCAGATGACAATTTACATGGAGTTAAATTGGAACCTATTGAGGAAACTAAGTATTATAATGATGTGGAATCGGTGAAGGAAGAAGGGGATTATACTTATCTGCCATCTCCTGTGCTGTCCAGTGACGATGATGAACCACTATCAACGCACAAAAGAAACAAAGAAATGGAATATGAGAACCACAAGTCTGATGAGAAAGAGAAAAGTAGTAATCAGGATCCACCCGCGGAGGTTCCAGTCAAAAGGAAACGTGGAAGACCTAAAAAGGGGGAGGTAAGGGCACCTAAAACCAATAAGAAGAAATCTGTGATGGCAGCTGCGCAGAATGTCGCCGCAGAAGATATGGATGTCAATCAGTATACCACTGTCGTTAAGTTAACTACGGAAGAACAACTAGAAGAAATAATGAAACGGAAGGAATCGTCGAATTATCTAAATGCGCCTTATAGATGCGATTACTGCTACAAGGGATTCATTGAAACTCATGCGTGGGAGCATCACATCGCCAAACACGATCCGAGCGCAGGTGACGTGGAATGCCCTATCTGCAAGATACGCTTCAAGAGCAAACGCAACCTGATGAAGCACGCCGCCAACCACGAGAAGATCTACAAGTGCAAGGCGTGCCCATACGTATCTAAAACTTCAGCTCAAGCGAAACAACATCAGATGTGGCATAAAGGTGTCACTTACAAGTGCCAGTACTGCGATGAGATATCCACCAAGTGGACGTCTTACTTGAGCCACGTGCGCATGAAGCACCCGTCGGAGTTCATCTGCGGCGTGTGCGGCTACTCGTTCGTGAGCCGGCTCGGCCTCACCATGCACCGCACCATGATGCACAAGAACCTTATTGATAAAGAACAAGAGGACGACGTGAAGAGTGAAGAAACGGGGCCTTATTGTGCGGAGTGCGACGTCAAGTTCATATCGCTGGAGGCGTACAAACGGCACATGGTCACTTCCGTCAAACACTCGCAGAACACGGAAAACACGCACGGTTGTCGCGCGTGCGGCGAGCGCTTCGCCAGCGCAGAAGCCCTGCGGCTGCATCACCGCGCTTCGCACGCGCGCCGCCGCCCGCGCAACTACGGCAAGCGCGCAGAGCCCGGCCGCTGGCCCGCGCCCTGCACGCACTGCCAGGAGCAGATAGCGAACGCGAGGGATTACTGGACGCACTTCCGACGAGTGCACCCCGACAAGAACTATCCCATACAGAAGGATTACGTGTGCGACATATGCGGGAAAAGCTTCAGGGGCAACGCATTCCTCGTGTATCACAAGCGCACGCATTCAGAAGAGCGTGCGTTCCGATGCACCGTGTGTCCGAAGGCGTTTCACAATCGCACGAATTTACACATGCACCAGCGGACGCATTCAGAGCTGCGGCCGCATTCTTGCCGCGTCTGCCTGAAGGGATTCAAGTCGAAGGGAGCACTTGATAGGCATTTCAGGAGCCATACGGGAGTGAAACCATACGAGTGCGAAGTATGCGGCAAGGCTTTCGGACAGAGCAACAGTCGCAAGCTGCACGTACGCACCGTACACCTCAAGCAACCCGCGCCATATGTCAGCAGGAGTCGACTCGAACGCCGTCGACAGCGTGAGCCGCACGCAGCTGTACCTAACGCACCCATAGACACGTGA
Protein Sequence: MESTKVCQICLVMDVRMFDVRTYPLVKYFEAVLQGNSYRNMLLPPYICYECNALVRKFYFFKERCTKGQGALYNMLYMSGETLLENNLAIQRHQLQLNLNLSTSKQSEIDIIEIQADDNLHGVKLEPIEETKYYNDVESVKEEGDYTYLPSPVLSSDDDEPLSTHKRNKEMEYENHKSDEKEKSSNQDPPAEVPVKRKRGRPKKGEVRAPKTNKKKSVMAAAQNVAAEDMDVNQYTTVVKLTTEEQLEEIMKRKESSNYLNAPYRCDYCYKGFIETHAWEHHIAKHDPSAGDVECPICKIRFKSKRNLMKHAANHEKIYKCKACPYVSKTSAQAKQHQMWHKGVTYKCQYCDEISTKWTSYLSHVRMKHPSEFICGVCGYSFVSRLGLTMHRTMMHKNLIDKEQEDDVKSEETGPYCAECDVKFISLEAYKRHMVTSVKHSQNTENTHGCRACGERFASAEALRLHHRASHARRRPRNYGKRAEPGRWPAPCTHCQEQIANARDYWTHFRRVHPDKNYPIQKDYVCDICGKSFRGNAFLVYHKRTHSEERAFRCTVCPKAFHNRTNLHMHQRTHSELRPHSCRVCLKGFKSKGALDRHFRSHTGVKPYECEVCGKAFGQSNSRKLHVRTVHLKQPAPYVSRSRLERRRQREPHAAVPNAPIDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -