Efla009128.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- -
- Assembly
- GCA_905163395.1
- Location
- LR990855.1:15330609-15337001[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.0018 0.15 13.5 0.9 1 23 123 145 123 145 0.97 2 31 0.00091 0.077 14.4 0.2 2 20 175 193 174 195 0.92 3 31 7.1e-05 0.006 17.9 0.2 2 23 229 251 228 251 0.96 4 31 4.6 3.9e+02 2.7 2.4 2 19 270 287 269 290 0.91 5 31 4.6 3.9e+02 2.7 1.9 2 21 301 320 300 323 0.93 6 31 0.0065 0.55 11.7 0.2 1 23 337 359 337 359 0.96 7 31 0.00015 0.012 16.9 2.6 1 23 397 420 397 420 0.94 8 31 0.0012 0.11 13.9 4.2 2 23 460 482 460 482 0.97 9 31 0.00018 0.016 16.5 0.9 1 23 532 555 532 555 0.97 10 31 0.00016 0.014 16.7 0.1 2 23 617 638 616 638 0.96 11 31 0.0012 0.11 13.9 4.5 2 23 650 671 649 671 0.97 12 31 0.087 7.3 8.1 1.9 2 23 683 704 682 704 0.96 13 31 0.01 0.87 11.1 0.7 1 23 714 736 714 736 0.98 14 31 0.013 1.1 10.7 7.2 1 23 764 786 764 786 0.96 15 31 0.00017 0.014 16.7 2.8 1 23 797 819 797 819 0.97 16 31 0.00021 0.017 16.4 0.5 1 23 827 849 827 849 0.97 17 31 0.00021 0.018 16.4 0.7 2 23 869 891 868 891 0.97 18 31 0.85 72 5.0 0.2 1 23 909 931 909 931 0.92 19 31 0.088 7.4 8.1 4.3 1 23 938 960 938 960 0.98 20 31 0.0051 0.44 12.0 2.5 2 23 971 993 970 993 0.95 21 31 0.0022 0.18 13.2 0.2 2 23 1016 1037 1015 1037 0.95 22 31 0.99 83 4.8 4.0 2 23 1080 1102 1079 1102 0.95 23 31 0.15 12 7.4 1.1 1 23 1117 1139 1117 1139 0.93 24 31 4.9 4.2e+02 2.6 4.2 5 23 1149 1167 1146 1167 0.94 25 31 0.015 1.3 10.5 0.9 2 23 1178 1200 1177 1200 0.95 26 31 0.12 10 7.7 2.5 2 23 1217 1235 1217 1235 0.93 27 31 6.7 5.7e+02 2.2 2.9 2 21 1239 1258 1238 1259 0.91 28 31 0.56 47 5.6 0.7 2 23 1308 1329 1307 1329 0.93 29 31 0.00065 0.055 14.8 0.8 2 23 1340 1362 1339 1362 0.97 30 31 1 86 4.8 4.5 2 20 1400 1418 1399 1420 0.93 31 31 5.1 4.4e+02 2.6 0.0 8 21 1428 1441 1427 1442 0.92
Sequence Information
- Coding Sequence
- ATGGCGGACGCCGTGACGTCACAGGCAAGTTTCAGCATCAGCCCACCATTGGCTAACAGACAAAGCAGTGACTCTGCCTTCTCAACGCACACTGAAACCTCTAACCAGGTATCTTCCAAACCATCATCCATAGGTGGCCCGACACCTATCATGAGGGATCGTAAACGAAGTCACGAGAGTGTTGATACACCAACCCACAGCAATCAGGAGCGACCCAGTGCTTCCAAACGTGTTGAAGAATTGAGGAATTCGAAACGACCACGCCAAACATCAGTCAATACGTCATATGGGGATTCTGATTATGAAGACAACAGCATCTCACAGTTCTCTGGAACTGATTCTGATGAGCCGCTTCTCAAGAATGAGTACAAATGCATCGTTTGTGACAAGAGTTTTAGATCTGTCAAAAGTCGCAGTGCCCACATGAGGATCCACAGCAAAGAGGCTCTAGGAAAGAATGAAGTTGTGAATATTCCCAAAACAAACTTTACGGAAGACGCCAATGATGAAGATGATAAGCTGGTTTGCGAGAAGTGTGATAAAACATTTAAACTAAAGATAATGCTCAAAAGACATGAAGCGACATGTACAGGACGGATTGTTATGCCACAAGTTTCTCCACAAAAAGAGCTTAAGGTGTCGCTGCAACCCTGCGATGCCACAGTGAACTACCGACTCAAGTTAGAGTGTGAAATATGTACGGCAAAATTTAAGGCACTTGACAATTTGCGCAAACACATGCGCGTGGTGCACGCAGCTACCCTAAAAAGCGATATGGAACCTAAAAAGACAGTGACAGTCAGCGTTCCTTGTTGCTTCTGTCAGGAATCTTTCACTGATTACAATGCATTCCATGATCACTTTTCCAATTGTCCAGAGAGGTTCGCCACCACTACATTGGAGTGCATGGTGTGTCACAAGATAATGACAAGAGTTCAGAATTATATGAGTCATATAAGGTGTGGACATTTTGAGATAAAGACACAATATACTTCTACTCCTACTTCATACAAGTGTCGGATTTGTAATAAGAAGATGGCGACGCAGGAGTTGCTTATTACGCATCTAGCGGCGCATATGTCCAACATTGAGGAGGACGACATCGACGATGATGACAGGCAAAGCGCTCCAGACGACACGGTATCGATACATTCGTCGTACAGCGGAAGTTATGTCACTCACGGCCCTCATAAGTGTACCTACTGTGAAAAGTCATTCTCGTATAAAAAAGCACTCGCAAATCACGTAGTAAAAATGCATGAATCGATAGAGATAAAGGTGGAACCGCCAGACAAGCCCGCAGAAAATACTCTTCTTGCTGAGAGTTATCCTAAAAGCGAGTCAGACCCCAGTTCCGATGAGGAAGAGGATGACAACACCTGCGATATTTGTGAGAAACAGTTCTCATACAAACGCCTACTCCTCCATCACAAACGCACGAAACATAATATGAGCTCAGGACATAAGAGAGCAAAGATCAACCTCAAAGACTGCAGTGTCAGGTGCCTCATCTGCGACATCGAGATGAAGGTGAGCGGGGTCAACGAACACAATCAGAAGCACATAACAGCGAACATGAAACCTCGCAACGTGTACACTTGTGCAGAATGCAGCGAGAAATTCAAGTCTTGCAGCGCACTTGCCAATCACATCAAGCTGATCCATCGTCTCAAGCAAACGCCGAAGCCCAAGCCGCCGCCCAAACAACTCGAGGGCGGCTCGGAGCTGGCGGATTTTTGTGAAGTCGTTGTGACCAAGGCGGAGCCCCTGGACGAGGTCCAGAGTCACAACGGCTTTGGGGGAGAGGTTCCGTCGAAGGCTGCTCCACTCGTCAACCTGAGCGGCTTGTCGTGCCCAATATGCGGGAAAACACTCGGCACACTTATTTCACTTAAACGGCATATAAACTGGCACACTAACGTCGGCAACAACATTGAGAAGAAGGTCGAGTGCTTTGTGTGTAACGAGACATTTCGGTTTCAATGTCACTATAAGATTCACATGCGGGTGCACTACCGCGATACCAACATAGATCCCAAGTTCCTAACGTGCACCATTTGCAACCGCAAGAGCAAGCATTTGCGCGCTGCGCAAGCGCACATGAACTTCCATAAACAGACGCGTTTCCAGAACAAAGACTACGAATGCTCTATCTGCAAGCGCGTGTTCCAATTCCGCAAGGTATATCTCTCGCACATGGCCGTGCACTACAAGCGCGGCGAAAGCCAGAACACTATCATTGGCGACATCGTGCCCAAAACAGGCGATAAAAGCAACTTCGATGGCAACCACAGGTGCCACCTCTGCGGCAAAGTCTGCGAGTCTGAAAACTCGCTCAAACACCACCTGAGCTGGCACAAGTCCAAGACCTTGCTGTTCGGGGCGCGGCACGAGTGCCACATATGCCAGTTGGTATTTACGAACAAGAGGAGACTGGAAATTCATATCAGAGAACATTACGAGGACGAGAACGGGCCGTTCAAGTGCACCATCTGTGGCAAGGGGTACATAGAGGAGGACTATTTCCGCAGGCACGTGAAGGGGCACAATTTTGACCACCAGTCACACAAGAAAAGGATCGAAAAACTCAGGAAAGACAAAGTCAAGTGTCCCATCTGCACGCGCTACTACCCGGACCTCGTGCACTTGATCCGGCATCTGCGCCGCACGCACCCCGAGAGCAAGATGATCAAAGAAGACCCTGACGCGCCACCCGCGCGCTACTATGCCTGCAAACTCTGCGCCAAAGTGTTCCTCGACGAGCGGCGGCTCCAGAAGCACGAGGAGGCTCACCTCAGAAAACCGGAGTTCTTCAAATGCAAGTTCTGCGGCAAGAAGACCATCTCTCTGAAGAATCATAACATCCATATAAAGTCCCACTTGGTAAAGAAACACGTCGACAACCCACTCAAGTGTCCGAAGTGCGACGAGCACTTTATCCGTGGCTACGACCTGCACTACCACTTGCGCGACACGCACGGCGTCGAAGAGACGTGGATCGCAGACCGCAGCGAGATCCCGCTGTCCGGCCCGCTCAAGGAGCTGCAGTGCTCCATCTGCCTGAAGGTGCTCGCCAGCAAAGGCAACTTCGAGCGCCACATTGACTATCACAACTCCCTCCGCTGCAATTACTGCTTTGACTATTTCAGCGCGCTGCGCTTCCTCGAGGGCCACTTGGCGTACTCTTGTGAGAAGAAAATGTTGATTGGCGATACAGAGATCCATCCCCGAAAGATTAAGTGTCACATTTGCTACAAAGCTTTCTATCTGCAAGTTAAACTGGATTGTCATCTACGTACGCAGCACAATATTAAAGTTTGTAAGGAGATGTCGTCGAATAGGAAAGACTTTGTCTGTGATTATTGTTTCAAATTGTTTGAAAACGACTATGCTTTGAGCACACACAAAGTTTACCATCGCACCATCGGCTACTATGGGTGTATTTACTGTAGCCGCAAGTTCAACACGATGACGCTGTACCGGAAGCACAAGAACCATCATTTTTCGCAGCTGAACGTGGACGAGCCCACCAAGTGCGAGCACTGCGACGAGACTTTCGTCGCCTTCCGCGATATGATCTACCACATGCGCGACGAGCACGGCGATGACAAGGAATGGATTGTGCTGCCCAAGGAGTCCATTGAGGAGGAGTGCCCCATCTGCAAGAAGGTGTTCTTCAACCTGCATCGCCACATGGACTACCACGAGGAGAACAAGTGTAAGAAGTGCAACGAGTACTTCTTCTCGAGGCTCGATTACGACAACCATTTGTGCTCCATTGAGAGCGACGAGGAGACCGCGCGCAGCATTGCCGCCGACCCGCAGGCCATCTACGACGAGTGCCGCTTCTGCTTCAAACAGGTTACGAAGCGGGACTCGGAGTTGAAGCACAACCGCATCCACAGCATATCGGGCGCAATCTCGTGCAGGTTCTGCACGCTGAAATTCAAGACGGTGGACGCGTTCAACATCCATGCGTTCTCGCATCGCAGTAGAAAGTACAACAAGAGGCCGATCAAATGTCGAAAGTGCGGAGAGAAGTTCGTGAAATACGGACCCTTCATGCGGCACATGAAGACGGTGCACAAGTCGACGAAGAAGGTTCACTATCGCGCGTTCGTCAAGCCTGAGCGCTGTGTCATATGCGGCGGCGACTTCCCGAACCTGCACAACCACTACCGCGCTCACTTGCAGAACCAATGCCGCAGTTGTCATAAGTACTTCACATCGTCCAAACTCTTCGCGAAGCATGAATGTGATAAAGAGGACTTGGAACCTGAGAAGGTGTTTACGAGTGACGAGAATTTGATTGCTCATATCAACGCGTATGTTCCGAAAGATGAGAGGGATGATGAGAAGTATTATGGACATAGTGGTGAGGAGGATGAACCAGAACCTGAACCTGAACCGGAAGTGAATAAGGATGTAAAGAACATGCACATAGTGTTGAGCCAAGACGAGGATAGTCAAGCCAGTCAAGTGCTGGATGAAGATGAGAAGAATCTGCATCTCATGGCGCAGTCTCCGATCATATCTGACGTGCTGTCGCTCTACCAGGCTCAGAAAGATGATGATGTTGTGCATGTCACTGATGATGATAGCATGGATATTACCATACCTGTTATTACCATTGATTAG
- Protein Sequence
- MADAVTSQASFSISPPLANRQSSDSAFSTHTETSNQVSSKPSSIGGPTPIMRDRKRSHESVDTPTHSNQERPSASKRVEELRNSKRPRQTSVNTSYGDSDYEDNSISQFSGTDSDEPLLKNEYKCIVCDKSFRSVKSRSAHMRIHSKEALGKNEVVNIPKTNFTEDANDEDDKLVCEKCDKTFKLKIMLKRHEATCTGRIVMPQVSPQKELKVSLQPCDATVNYRLKLECEICTAKFKALDNLRKHMRVVHAATLKSDMEPKKTVTVSVPCCFCQESFTDYNAFHDHFSNCPERFATTTLECMVCHKIMTRVQNYMSHIRCGHFEIKTQYTSTPTSYKCRICNKKMATQELLITHLAAHMSNIEEDDIDDDDRQSAPDDTVSIHSSYSGSYVTHGPHKCTYCEKSFSYKKALANHVVKMHESIEIKVEPPDKPAENTLLAESYPKSESDPSSDEEEDDNTCDICEKQFSYKRLLLHHKRTKHNMSSGHKRAKINLKDCSVRCLICDIEMKVSGVNEHNQKHITANMKPRNVYTCAECSEKFKSCSALANHIKLIHRLKQTPKPKPPPKQLEGGSELADFCEVVVTKAEPLDEVQSHNGFGGEVPSKAAPLVNLSGLSCPICGKTLGTLISLKRHINWHTNVGNNIEKKVECFVCNETFRFQCHYKIHMRVHYRDTNIDPKFLTCTICNRKSKHLRAAQAHMNFHKQTRFQNKDYECSICKRVFQFRKVYLSHMAVHYKRGESQNTIIGDIVPKTGDKSNFDGNHRCHLCGKVCESENSLKHHLSWHKSKTLLFGARHECHICQLVFTNKRRLEIHIREHYEDENGPFKCTICGKGYIEEDYFRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICTRYYPDLVHLIRHLRRTHPESKMIKEDPDAPPARYYACKLCAKVFLDERRLQKHEEAHLRKPEFFKCKFCGKKTISLKNHNIHIKSHLVKKHVDNPLKCPKCDEHFIRGYDLHYHLRDTHGVEETWIADRSEIPLSGPLKELQCSICLKVLASKGNFERHIDYHNSLRCNYCFDYFSALRFLEGHLAYSCEKKMLIGDTEIHPRKIKCHICYKAFYLQVKLDCHLRTQHNIKVCKEMSSNRKDFVCDYCFKLFENDYALSTHKVYHRTIGYYGCIYCSRKFNTMTLYRKHKNHHFSQLNVDEPTKCEHCDETFVAFRDMIYHMRDEHGDDKEWIVLPKESIEEECPICKKVFFNLHRHMDYHEENKCKKCNEYFFSRLDYDNHLCSIESDEETARSIAADPQAIYDECRFCFKQVTKRDSELKHNRIHSISGAISCRFCTLKFKTVDAFNIHAFSHRSRKYNKRPIKCRKCGEKFVKYGPFMRHMKTVHKSTKKVHYRAFVKPERCVICGGDFPNLHNHYRAHLQNQCRSCHKYFTSSKLFAKHECDKEDLEPEKVFTSDENLIAHINAYVPKDERDDEKYYGHSGEEDEPEPEPEPEVNKDVKNMHIVLSQDEDSQASQVLDEDEKNLHLMAQSPIISDVLSLYQAQKDDDVVHVTDDDSMDITIPVITID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -