Basic Information

Insect: Endotricha flammealis
Gene Symbol: -
Assembly: GCA_905163395.1
Location: LR990881.1:8552165-8555658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 1.5e-05 0.0013 20.0 0.7 1 23 92 114 92 114 0.98

2 22 6.3e-05 0.0054 18.0 0.4 1 23 120 142 120 142 0.99

3 22 0.00024 0.02 16.2 5.1 1 23 148 170 148 170 0.97

4 22 2.8e-06 0.00023 22.3 2.3 1 23 176 198 176 198 0.99

5 22 0.00011 0.0092 17.3 7.0 1 23 204 226 204 226 0.98

6 22 0.0021 0.18 13.2 0.3 5 23 236 254 233 254 0.93

7 22 3.6e-05 0.0031 18.8 2.8 1 23 260 282 260 282 0.98

8 22 4.8e-05 0.0041 18.4 1.9 1 23 289 311 289 311 0.98

9 22 0.00014 0.012 16.9 0.4 1 23 317 339 317 339 0.98

10 22 6e-05 0.005 18.1 1.1 1 23 345 367 345 367 0.99

11 22 1.3e-05 0.0011 20.2 3.2 1 23 373 395 373 395 0.97

12 22 5.4e-05 0.0045 18.2 3.0 1 23 401 423 401 423 0.98

13 22 5e-06 0.00042 21.5 0.2 2 23 430 451 429 451 0.97

14 22 0.0011 0.094 14.1 0.8 1 23 457 479 457 479 0.98

15 22 7.8e-06 0.00066 20.9 6.2 2 23 486 507 484 507 0.94

16 22 5.8e-05 0.0049 18.1 0.3 1 23 513 535 513 535 0.98

17 22 7.5e-05 0.0063 17.8 4.4 1 23 541 563 541 563 0.98

18 22 6.1e-05 0.0052 18.1 1.3 2 23 569 590 568 590 0.97

19 22 4.6e-08 3.9e-06 27.9 3.2 1 23 596 618 596 618 0.99

20 22 2.3e-05 0.002 19.4 3.4 1 23 631 653 631 653 0.98

21 22 6.1e-06 0.00051 21.2 2.1 1 23 659 681 659 681 0.98

22 22 0.06 5 8.7 0.3 2 23 688 708 687 708 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	1.5e-05	0.0013	20.0	0.7	1	23	92	114	92	114	0.98
2	22	6.3e-05	0.0054	18.0	0.4	1	23	120	142	120	142	0.99
3	22	0.00024	0.02	16.2	5.1	1	23	148	170	148	170	0.97
4	22	2.8e-06	0.00023	22.3	2.3	1	23	176	198	176	198	0.99
5	22	0.00011	0.0092	17.3	7.0	1	23	204	226	204	226	0.98
6	22	0.0021	0.18	13.2	0.3	5	23	236	254	233	254	0.93
7	22	3.6e-05	0.0031	18.8	2.8	1	23	260	282	260	282	0.98
8	22	4.8e-05	0.0041	18.4	1.9	1	23	289	311	289	311	0.98
9	22	0.00014	0.012	16.9	0.4	1	23	317	339	317	339	0.98
10	22	6e-05	0.005	18.1	1.1	1	23	345	367	345	367	0.99
11	22	1.3e-05	0.0011	20.2	3.2	1	23	373	395	373	395	0.97
12	22	5.4e-05	0.0045	18.2	3.0	1	23	401	423	401	423	0.98
13	22	5e-06	0.00042	21.5	0.2	2	23	430	451	429	451	0.97
14	22	0.0011	0.094	14.1	0.8	1	23	457	479	457	479	0.98
15	22	7.8e-06	0.00066	20.9	6.2	2	23	486	507	484	507	0.94
16	22	5.8e-05	0.0049	18.1	0.3	1	23	513	535	513	535	0.98
17	22	7.5e-05	0.0063	17.8	4.4	1	23	541	563	541	563	0.98
18	22	6.1e-05	0.0052	18.1	1.3	2	23	569	590	568	590	0.97
19	22	4.6e-08	3.9e-06	27.9	3.2	1	23	596	618	596	618	0.99
20	22	2.3e-05	0.002	19.4	3.4	1	23	631	653	631	653	0.98
21	22	6.1e-06	0.00051	21.2	2.1	1	23	659	681	659	681	0.98
22	22	0.06	5	8.7	0.3	2	23	688	708	687	708	0.95

Sequence Information

Coding Sequence: ATGGAGGAACCGGATAGTGATGACGAGGAGTCAGTATTATGGATCGATGTTGATGATGTCATGAATGAACCCGAGCAAATTGTCGATGATGATGATGAAGTGGATGAAACACAGACCGACATTATTGTGTTGGAGAGTGGAAATGACATTGAAATAGAAGGTCCAGATATATCTACAATAGAACTTCCAAAAGATGCACAACAAACAGAATCTACCGACAATACCAACAGAAAACCTGAACAAGATCAACAGTTGGAGTCGCCACAAGAGAATTTTGAATGTTCAATCTGTAGCCTACTGTTTGAACAGAAAGACTATTTAGAGAAACACATGAACACACATGAAAAAGAAAACAAATTTCAATGTGACATATGCCAGAAAGGATTTAACGATGATTGGTTTCTTAAAATGCATATCATGACTCATACAGGTGACAGACCTCATAAATGTAGGGTATGCCAGAGAACATTCAGCGACAAGAAATTACTTAAAAAACACTCAGACACACATTATACATTAAAACCATATAAGTGTGGAATATGCGGCTGTCGTTACACACAGAAAGGCAGTCTGAACAGACACGTTAACACTCACACAGGAGTGAAACGTTTCGAATGTCTAATATGCCATCACAAGTTCAACTACAAGAGCAACTTAAAAACACACATGTCAAGACACGGCGCTCAAAAACCAGTTGAATGTATTTTATGCAAACAGAGATTCAATGATAATTATGCACTAATTAACCATCTGAGGATTCACACAGGTGAAATGCCTTTCCAGTGCACGATATGTAACAGAAGGTTTACAGAAAAACGCGCATTAAATAAGCACAACAAATCACACAGCGTAATACCGCGCGAGTATGAATGTCCAACTTGTCATCGCACGTTCAACACACAGTATCGTTTGGATATACATATACTAAGTCACAGTGGAATAAAACCTTTTGAGTGCAAGGAATGTGGACGTGGTTTTATGGAGAATAAACTATTGAAGATACATGAGAGATTGCACGCAGGCGTCAGGCCGTACACGTGCGCAATATGCAAACGCAATTTTATAGAGAGAAAGACACTAATAAAACATTTGAATACGCACACCGGGGAGAAATTATTTGAGTGTACGTTTTGCAAGAAAAAGTTCACACAAAAGGGCAGCTTGAATCGACATGTGTACATGCATACTGGTGAACGGCGTTTCCAATGTGCAATTTGTGATTGCAAGTTTACTGAGAAGAGCAAACTGAAAACGCACATATTATCACATACAGGGTATAAGCCTCTTGAATGTGGGATATGTAAGAAGGGGTTTACTGATAACAATGGTTTAAGACTACACATGAGAATACATTCCGGTATAAAACCTTTCACGTGCGATATTTGTCAACGCAAGTTTTTAGATAAAAGGGGACTAAACGGCCATATGCAATCACACACTCAAAATGACAAATGTCATTGTCCAATATGCAAAAAAGAGTTCAATCGGAAAAGTTACTTGCAGAAACACATGAATTTACACACAAAAAAGAAAATATTCCAATGCGCTATGTGTAATCGCATATTCAGTAGTAAACCATCATTGGTTCTCCATATAAATAATCATTCTGGTGAGAAGCCATACGAATGTGAGATTTGCAAGTGTAAATTCTCACAGAACCATACACTACAAAAACACTTGGCTATACATATCCGTCGTAAACTCGAATGTGCTCATTGCGATCGAACATTTAACTTCAAACGTAACTTAGACGCTCACTTGATTACTCACACTGGCATAAAACTCTTCCAATGCATGATATGTCAGAAGAAATTCAGCGATAATTCGACGCTGAAGAAACACATGAGAACGCACACAGTAAATATCATACCGCCTAATAAAGTGACTCAATACGAATGTACGATTTGCAAACGTACATTCATGCACAAATCGTCTCTTAATCAACACGTTTCATCACATTCTAGTGAAAAACCTTTCGAATGTAAAATATGTAAGAAGAACTTCAGCAGGAAGAATTCGTTGGATAAACACCTGGAGATGCATGCTAGGGTTAGACTTCTGAAATGCGTGATTTGCAAACACATGTATAACGAAGGAGATTTGAAGGCTCATATATTGGGGCACATGAAAAAAGCAATGCGCAGGAAAAGAAATTAA
Protein Sequence: MEEPDSDDEESVLWIDVDDVMNEPEQIVDDDDEVDETQTDIIVLESGNDIEIEGPDISTIELPKDAQQTESTDNTNRKPEQDQQLESPQENFECSICSLLFEQKDYLEKHMNTHEKENKFQCDICQKGFNDDWFLKMHIMTHTGDRPHKCRVCQRTFSDKKLLKKHSDTHYTLKPYKCGICGCRYTQKGSLNRHVNTHTGVKRFECLICHHKFNYKSNLKTHMSRHGAQKPVECILCKQRFNDNYALINHLRIHTGEMPFQCTICNRRFTEKRALNKHNKSHSVIPREYECPTCHRTFNTQYRLDIHILSHSGIKPFECKECGRGFMENKLLKIHERLHAGVRPYTCAICKRNFIERKTLIKHLNTHTGEKLFECTFCKKKFTQKGSLNRHVYMHTGERRFQCAICDCKFTEKSKLKTHILSHTGYKPLECGICKKGFTDNNGLRLHMRIHSGIKPFTCDICQRKFLDKRGLNGHMQSHTQNDKCHCPICKKEFNRKSYLQKHMNLHTKKKIFQCAMCNRIFSSKPSLVLHINNHSGEKPYECEICKCKFSQNHTLQKHLAIHIRRKLECAHCDRTFNFKRNLDAHLITHTGIKLFQCMICQKKFSDNSTLKKHMRTHTVNIIPPNKVTQYECTICKRTFMHKSSLNQHVSSHSSEKPFECKICKKNFSRKNSLDKHLEMHARVRLLKCVICKHMYNEGDLKAHILGHMKKAMRRKRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -