Basic Information

Gene Symbol
-
Assembly
GCA_905163395.1
Location
LR990878.1:4270071-4276148[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 2.5 4.9e+03 -1.4 0.0 1 10 124 133 120 137 0.64
2 9 2.3 4.7e+03 -1.3 0.0 12 45 146 180 143 181 0.74
3 9 6.8 1.4e+04 -2.8 0.1 23 31 283 291 275 292 0.78
4 9 0.18 3.7e+02 2.2 0.0 22 44 397 420 367 422 0.74
5 9 0.016 32 5.6 0.3 22 42 497 516 487 519 0.93
6 9 4.4e-05 0.088 13.8 0.4 11 46 618 663 617 663 0.93
7 9 6.6e-06 0.013 16.5 0.3 3 44 712 762 710 764 0.89
8 9 5.9e-05 0.12 13.4 0.0 23 42 894 913 871 917 0.80
9 9 0.46 9.2e+02 1.0 0.1 3 13 1069 1079 1067 1128 0.69

Sequence Information

Coding Sequence
ATGGAGCAGATTGTAGTTAAAACGGAGATGGATGGGGGGGAGATACTTCTTTTTTATGTTGATGAATCTGAAGATAATCATGTTGAAGGTACAGTAACATCAATTGAAAACATTCGAAATATTCAGGACATTCAAAATTTGCCTTCAATACAAAACATACAAACTATACATAATATAGAAGACATAACCCAAATACAGCAATTGCAAGATAATACAACATATATTATGGAAGACGCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATATATGGCTCAGGGCAATCAGGTCAAAGACAAATGGACATATGATGAAACAGGCAAATTACTTCTATTCTACCTTGATAATAAGGAGGTATTCCTCAGCGGGGTTTCTAAAGTAAAGAACCTCTGGGCAGTGGCATGTAAAACCGTACTTCCCGGAAAAAATCCGTTATCATGCGAGAAAAAAATACGCAACTTGAGAAGAAAGTACCGTCAAATGCGTATTGATCGTCAGAAAGGTTTAACTATAAAATATCCTTTATTTGATCTATGTCATAAAGCTTTTTTTTCTGATAAATATGTCAACCAAATGTGGAAAGAGAATTTTGATCAACCTACCACTGCTAAAATACCAATTACAACACAAAATAATACAGACGGGATTGTTGTTGTAAAGAATTTACCATCAAATACACGTGCCAGTGACAACAAAGTTGATAATATGCTCAATTTGTACTTAAAATATAAAAAAGAGTTTCAAAAAGAATATTGGCGAAAAGATTTGTGGGACAGAATTGCAATGGAAATGGGAGAAGAGGATGGTGATTATTGGCACAAAAGGTTTTTGAATTTCAAGCAACACTACCTCAGGATGGTGGTTAAACGTAAAGAGAATGGGCCACAGAGCATCAATTGGCCATACATGGCAATGTTCGATCAAATATTTCAAGATGATGTAGGATTTCAACGTAAAGTGGATATAAAGCCTGACAAACCCTTTACTATTGTAACAAATAGTGTGCTACCAACAGACACTGAAAATGATTGGAATGACACAGAAAAGATTGTGCTGGTAAAATATGTTTTTGATTGTTTTGACGAGTTCCAAGATCCAACAATACCAGATAACTTCTTATGGAATGAAGTTGGTAGATTGTTGGACAAAAAGCCTGATTCATGCAAACAAAAATTTGAAGAATTAAAAGTTGATCATTTAGAAAAATATATTGAAGGTCAATATGAGTTGCATAGTCGTATACCACTTGACATAGTTTTGGATAATGTGATCGCGAAAGAGACAGAAGTAGAATTTGTTAAGGAGAAACGGAAACAGAATGATACATGGAAGACATATGATTTGGATAATTTAGTAAAGCATTTCTATGATAATACAGAAATGTTTAAAGATTCTGTATGTTATTTTGTATGTTGGGCAAGTGTTGCTAAGAGACTGCATAAAAGTATACATGTTTGCAGATCACAATGGGATGAACTTACATTACTTTATAAGACACTTTTAGACGATAAAAAAGAGAATCCCGATAGCCAAATAGATTGGAGATATATAGAGTTATTTGACAGGATTTTTAACTATGGTATGGATACTGATTTGTTAGAAAATTTAGCTGAAACTAAGCCTAAAATTAAGGAAGATGATAAAATTGGTGTGAAAAAGGTGAACATTAATTATGAAAATGATAATATGGACAATCCGACCGATGACGAAGAATATGATGAAAGGGGTTTCACAAAACGCACCAAAAGGGGCATTGGTGACTCGAAAGCGTTTAAAATTTTGGAATATTTTCAAAAACACAAAGACAAATTCTCAACTAGTCAAAGAAAGAAACATGCGTTATGGCAGGTGCTCGCTAAACAGATTGGAATTACAGCTGAACAGTGCGCCCATAGATATAGGAATTTAAAGCAAGTGTACACAGTATACGTTCAAAGAGAAATAGATAAACCTGAGATGCCAATTCTGTGGCCTTACTATACCCTATGCAAAAAGGTATTTGGATACCGTGCTATAAAATCTAAGTTGAAGAATAGCAAAACTTCAGAGGATGAAGATTGGTCTGCAAAAGAGATAAAACAGATTATAAATTATTTTAAAAATAATTACAATCAAATGTCTGATTGTGTTGAGGACAGCGCTAAGTGGGAGGACATTGCCAAAGAGATTGGCAAATCAGAACATTCTTGTATGGAGAAGTTTGTAGAACTTAGAAAGTCCTATAGGAAACTTAAAACTATGAAGGAAAACAATGCTAATGTAAAAGTATCGTGGAAATATTTTAATTTGTTTGATGAGATATACAATTTTAAAGATGGCTATATTGTAGAAGAAATGGAAGTGGATGAAATCGAACATGTTATAGAAAGCGAACAAAATGATTCACAAGAAGAAGAAGATTATCAGTGTATCATCGTTCTACCTGAAGGACAGGATATATCAGATATTGAAAGCTCTCAAATCATTATGAATGACACTCCATCAGTCGTAGATACCCCTACTGTATCTAAATGGACTAAGCTCACTAAAAAAATACTTTTAATCAACTATTTAAACTATTTAAGATCTAAAAAGGGAAAAGAGATAGACGCAGTTGAAATGTGGAAAGAGATAGCAACAAAAATTCCAAACAAAACGCCTCTGTCTTGCAGAAAAATGTTTGCAAAACTCAAAAGCAATCATAAGGATTTGGAAAATGATGGTGTAAATAAAAAGAAGTCGCCATACTTTAAATTAATTGAGAAAGTATTGGCTTTTAAACCAAAGTTTATTAAAACTACACAAAATTTACAAGAAGGGCGTACATACAAAGATGTTCCATTACCGACTAACAAAATCGAGCAAGCACTGCAATATTACTTAGTACACATAGAAGAGTTTATAAGTCCTAGATTCGAGAAAAAACATATGTGGACAGAATTAGCTAACTTCGTTACAGAACCTGTAACTAGAGTGTTTAATAAAGTTAATTATTTGAAAAAGTATTATAATATTAATACAGATGAAGTGGCTGGGGAGAAGTCATTATTTAGTGAGTTATTAAAAGAAATTGTCACTAAAGAGACTGCAATAAAAGCTTTGATGGAAAATGAGCCGAAAGTGACTATTGAAGATCAAGGAGAGCTTACATGGTCGGACGAAGAGGTGGAGCAACTTTTGATATGGTACTTAGCCAATTTGGAACAATTCAAAGATCCCAAATATAGCAGAAAATATCTATGGTTGGATGTTGCGAACATTTTGCAGAAAACTCCGTTGGCTTGCTCCAAAAAAATGGCAGAAATTAGAACACAGTATAGGAATATGGTGAAGGAGAATTCGGATGATTGCAGTATTTGGAAATTCTATAATTTATGTCAAAAAATTTATGGTACGGGAAAGAAAAATGAAATGAATAGTGTATGA
Protein Sequence
MEQIVVKTEMDGGEILLFYVDESEDNHVEGTVTSIENIRNIQDIQNLPSIQNIQTIHNIEDITQIQQLQDNTTYIMEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMAQGNQVKDKWTYDETGKLLLFYLDNKEVFLSGVSKVKNLWAVACKTVLPGKNPLSCEKKIRNLRRKYRQMRIDRQKGLTIKYPLFDLCHKAFFSDKYVNQMWKENFDQPTTAKIPITTQNNTDGIVVVKNLPSNTRASDNKVDNMLNLYLKYKKEFQKEYWRKDLWDRIAMEMGEEDGDYWHKRFLNFKQHYLRMVVKRKENGPQSINWPYMAMFDQIFQDDVGFQRKVDIKPDKPFTIVTNSVLPTDTENDWNDTEKIVLVKYVFDCFDEFQDPTIPDNFLWNEVGRLLDKKPDSCKQKFEELKVDHLEKYIEGQYELHSRIPLDIVLDNVIAKETEVEFVKEKRKQNDTWKTYDLDNLVKHFYDNTEMFKDSVCYFVCWASVAKRLHKSIHVCRSQWDELTLLYKTLLDDKKENPDSQIDWRYIELFDRIFNYGMDTDLLENLAETKPKIKEDDKIGVKKVNINYENDNMDNPTDDEEYDERGFTKRTKRGIGDSKAFKILEYFQKHKDKFSTSQRKKHALWQVLAKQIGITAEQCAHRYRNLKQVYTVYVQREIDKPEMPILWPYYTLCKKVFGYRAIKSKLKNSKTSEDEDWSAKEIKQIINYFKNNYNQMSDCVEDSAKWEDIAKEIGKSEHSCMEKFVELRKSYRKLKTMKENNANVKVSWKYFNLFDEIYNFKDGYIVEEMEVDEIEHVIESEQNDSQEEEDYQCIIVLPEGQDISDIESSQIIMNDTPSVVDTPTVSKWTKLTKKILLINYLNYLRSKKGKEIDAVEMWKEIATKIPNKTPLSCRKMFAKLKSNHKDLENDGVNKKKSPYFKLIEKVLAFKPKFIKTTQNLQEGRTYKDVPLPTNKIEQALQYYLVHIEEFISPRFEKKHMWTELANFVTEPVTRVFNKVNYLKKYYNINTDEVAGEKSLFSELLKEIVTKETAIKALMENEPKVTIEDQGELTWSDEEVEQLLIWYLANLEQFKDPKYSRKYLWLDVANILQKTPLACSKKMAEIRTQYRNMVKENSDDCSIWKFYNLCQKIYGTGKKNEMNSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-