Efla006458.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- -
- Assembly
- GCA_905163395.1
- Location
- LR990881.1:2929529-2929942[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-10 5.7e-07 30.0 0.0 1 39 16 55 16 60 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGAAAATATAAAAAAAAGGGCACGCGTACTCAAGACGTGGATGAGGAGTCCATAAAATTAGCAGTTGACGACGTAATTCATGGACGCTTGTCGTATAGGAAATCCGCGTTGAAATATAACATCAAGACCTCGACGTTGGAAAGCAGAGTCAAGAAATTCAAAGAAGGCTCTAACAGCGATGGACCCTCACGAACATTTCATTCTAAGTTCACGAGACTCGTGTCAAGTCAACAAGTCTTCTCCTTGGAAGAAGAGACACGCTTAAATGACTACATTATTAATTGCTGCAAAATGCATTATGGGCTAACAACAGTACAAATTCGCAAACTTGCCTACGAATACGCGAAAGCTTTAAATTTAAAATATCCCGCGAAATGGGATGAAAACCAAATGGCCGGCTTAGAGTAG
- Protein Sequence
- MVRKYKKKGTRTQDVDEESIKLAVDDVIHGRLSYRKSALKYNIKTSTLESRVKKFKEGSNSDGPSRTFHSKFTRLVSSQQVFSLEEETRLNDYIINCCKMHYGLTTVQIRKLAYEYAKALNLKYPAKWDENQMAGLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01362389;
- 90% Identity
- iTF_01192578; iTF_01362389;
- 80% Identity
- -