Efla019865.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- -
- Assembly
- GCA_905163395.1
- Location
- LR990852.1:2403246-2403851[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 1.9e-13 50.7 0.0 2 40 83 122 82 127 0.94 2 2 2.5 3e+03 -1.1 0.0 29 40 126 138 126 140 0.70
Sequence Information
- Coding Sequence
- ATGAACATGCTGGAGAATTATCCGCGCTACAATTCATGCGTTGGCGTCGGCGGCGGGCAACAGGATGGTGGCCTGCCTTTCAATAACGCAATGAGCCCGCACATGGGCGGCGACATGACGGCGTACGCACCATGCTTGGGCGTGGCGGGCCCCGCGCCCGGCCCCAGCTGCATGCCTGACCAGCAACAGCAACAGGGGGCGATGCCGGCCCCGGCCAAGCGGCGGCGCACTTCAAACCCGCAAGCTGAGGAGAAATTTCAACGCGCGCTGGACGCGGTTCGCTTCGGCGGCATCGGGTTTTGTAAGGCCGCACGCATTTTTGGCGTGAACAATCGAACGCTGTGGCTCGAGTATAAAAAAAGGGGCTTCCCAAACAACAGATCCAGTATCAGAAATAGAATCAAACGCGAGCACTCGACGCCGCCGTTGCCGGTCGAGAAGGAGGAGCAAGCGCAGCCCGAGCAGCAGATGGCGCTGCTGTGCCCGCCGCACCCGGTGCCTGTTAGTTTTATCGACTCCAGGTCGACGATCGACTTTCCGCTGCAGGGAGTACCTCATAATTCGCCCCTCAACATTTTGGGGATGAATTTTAACTCTATGCAATAG
- Protein Sequence
- MNMLENYPRYNSCVGVGGGQQDGGLPFNNAMSPHMGGDMTAYAPCLGVAGPAPGPSCMPDQQQQQGAMPAPAKRRRTSNPQAEEKFQRALDAVRFGGIGFCKAARIFGVNNRTLWLEYKKRGFPNNRSSIRNRIKREHSTPPLPVEKEEQAQPEQQMALLCPPHPVPVSFIDSRSTIDFPLQGVPHNSPLNILGMNFNSMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -