Basic Information

Gene Symbol
-
Assembly
GCA_905163395.1
Location
LR990881.1:8077432-8089726[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-12 8.9e-09 36.5 0.0 3 62 260 317 258 330 0.85

Sequence Information

Coding Sequence
ATGACTCGACCGGGGATCGAACCCGGTACCTCCTGGGTGGCGGTCTGGCGTGGTTATGGGCATTACGCCACGGAGGTCGTCAAAATTAGGTGTATTTTTCAGGATGAAGTGCTAGCGATCAACGACAAGGTGGTGGTGAGAGCTGAGGACCTGCTCTCCTGGGTGTGCGACGGCTCAGGGTGGCGGTGGGGACTGCGCGCGGTGTGGCGAGGCGCTTGCACACCACCCGCCGAGCCGAGACCCACCACACCGTTGCACCATACGAAGCTTGACTTCAGCGACATCGAAAGAGAGAAGAGTGCTATGGTGATGGATGTGGAGTCCCCCGGTGTGATGGTGTTCTCGTACCCCAGATACTGCCGGTACCGCGCCCTCCTCTCCCGCTTGGAGGGCATCCAGGGCGACTGGCTGAGGGACTCGTTGGTGGCCGCACTGGGCGGTTACGCCGCACAGACCAAGAACACTAGGATTTTGTATTGTAAGGAAACCTTCGAGTACCCCGAGCTGGAGGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAAGGCCGCCCGCGGGGCCGCCGCCGCCGCCCCCCCCGCTCCCGCTCGCACTCCCCCTCCTCCCCGTCCAACTCCCCGACCCCCTCCCCTGATAGGTACAGCGATAGTGATCATAGACACCTTGGCCAGATGCAACCGAGGATACAAACGCCAAGGCGTCTGTCACTGCGCAACGGCGATAAAAGAAGCGAAGAAGAAGACGAGAGAAGAGAGGACACTGCAGAAGACAGGTCGTTCGTGACGCAACTGAGACAGTTTTACAAGGAGAGAAATGAACCGTTTAGGACTGGATATACTTTGAAAGACTTGTCACTCCGCGCTCTATACGAAGCGGTCAGGTCTAGGGGCGGTTACGAAGCAGTGTGCAGACTGAAGCTGTGGAGGGAGCTCTTCGCGGAGCAGCCGGCAAGGACGCGGAGGCACTACGAGAGGAATGGTAACATACCAAAGACAATTAATGGCAAAATCAACGAACCAAGGACAATAGCTACCATAGACGTAACAGACTCGCCGCTGAGGGACATAGACAAACACACGGAACTGCCAGAGAAGAGACTCAGGACGCCGTCACCCAAAACCATAGACTTCGAGACAGGCGAAACCAAGGAGGACTTGTTACTAATATCGAAACCTGCCGAAATATTAAATCGAGAGTTCCTAGAGTCTTTACCCAAAGAGGAGAAACCTTTAAAAATATCTGTGAAACCAGTAGAAAAGCTTCTCGACAATAATATGATGAAGATATTAGAGGAGAACAGTAACTTGATTAGTGAGCTAGCGGCTAAGCACAATTTGAAGGATTCTAACAAAGTGATAGCCGAAATCGGGTGTAAGAATAGTGAGAACTCGATGTTTTTGAACGAATTGGCGCAGAAGCTTAATTTGGGTCCCCTAGAGCCAATGCTGCCTGCGTTGGGTGGTGCACTGGGTACATTAGCGGCATTGTCAGATAAATACAACAATGGCCGACACGCGCCTCCGGCTGTGGAACAGAAATCCCGTCCGGCGGGGCGGAGCTCCCTTCGCGCCGTTCGGGTGAAGCCGACGCGGCCATTACTAGCGCACACGCCCGCCAACACACCGCCCATCCCCCCTCTCCGCGGCGACTCGTCGTCGCCCCCCCCCGCGCCCCCCTCCGGCACCATCACCAACTTCGGCATCCACCATCCACCACCTACCACCAGCAATCAGAGTGACGACGAAATTGTTGAGGTACCATACAGGCCTAAAACCCCAGAAATAATAGACCTAGACGAATATCCGGAGAGTCCACAAGGTCTCAAAAAGAAGAAACTGGATATCCTCAAGGAAAGGGGTCTAGAGGTTACGGCCATACCCAACCCCTGGCCAGGCTCCGTACCCATAACTCCAATGTTAAACCCGAACCCAATTCTCCTAAACCCATCCATGCAACACCAAATTATGACACAGGCACAACTATTCCAAATGTACAACATCATACCACCGAATTATTCAAACGGATTACAACCCCCGAAAGTGATACAAGCTACTTCCATATTCGGGTCTGCCGGACCCGAAAAGACCGTTTATGGAAACCCAAAAGACCCGTTTATGCCACCACCTCACATACTCCACGGCACACCCGTTAAACCACAAAAAGTACCAACAACTGTCCCTCCACCACCCGGTTTAGATATACTAGACTTGACTTGTAAAACCCAGCAGCCCGCTGTAGAAATTGTGAGGGTACCAACAACACCTTCGCCCAAGAAAAACTACACTTTAATCGACGGGAAAGCTGTAGTAGGTTCCAACTTGGAGATCACATTAGTTAATCCAAAAACATCTAAGAGCAAAGTACCACAGAAAAGGTCGTCTAACGGGAAGTTTATGTCGACCAAAACCCCAACTAAAGAGAAGGGATATTCTTGCCCATCACCGTCTGGTCTCCAGAAAAAACAGCCCATAATCGTACCTAATTATCAAATTAATCGAGACGACGTGTCGCCAACCAGTTCGACGGGTTCCAGAGACAGCCAAACTAATTCCAATCAAAATATGCTACAGAACGTATTCAAGAATCAGAATAGTTTAGCGCAAATCATGGAAATGCAGAAAAGCGTCATGCCACCCATGCCACCTTTCATTGACCCATATATGGCGCTATACAGCAGTCTAGGTCAAATGGACCAAAGACAATTAGCCGCTTATAGAGATTTGGCAAATCAATTCAAATATTCGAATATATTAAATATTGGTGTTGCCAACACACCGACAACGAAGAATTAA
Protein Sequence
MTRPGIEPGTSWVAVWRGYGHYATEVVKIRCIFQDEVLAINDKVVVRAEDLLSWVCDGSGWRWGLRAVWRGACTPPAEPRPTTPLHHTKLDFSDIEREKSAMVMDVESPGVMVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAQTKNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRSHSPSSPSNSPTPSPDRYSDSDHRHLGQMQPRIQTPRRLSLRNGDKRSEEEDERREDTAEDRSFVTQLRQFYKERNEPFRTGYTLKDLSLRALYEAVRSRGGYEAVCRLKLWRELFAEQPARTRRHYERNGNIPKTINGKINEPRTIATIDVTDSPLRDIDKHTELPEKRLRTPSPKTIDFETGETKEDLLLISKPAEILNREFLESLPKEEKPLKISVKPVEKLLDNNMMKILEENSNLISELAAKHNLKDSNKVIAEIGCKNSENSMFLNELAQKLNLGPLEPMLPALGGALGTLAALSDKYNNGRHAPPAVEQKSRPAGRSSLRAVRVKPTRPLLAHTPANTPPIPPLRGDSSSPPPAPPSGTITNFGIHHPPPTTSNQSDDEIVEVPYRPKTPEIIDLDEYPESPQGLKKKKLDILKERGLEVTAIPNPWPGSVPITPMLNPNPILLNPSMQHQIMTQAQLFQMYNIIPPNYSNGLQPPKVIQATSIFGSAGPEKTVYGNPKDPFMPPPHILHGTPVKPQKVPTTVPPPPGLDILDLTCKTQQPAVEIVRVPTTPSPKKNYTLIDGKAVVGSNLEITLVNPKTSKSKVPQKRSSNGKFMSTKTPTKEKGYSCPSPSGLQKKQPIIVPNYQINRDDVSPTSSTGSRDSQTNSNQNMLQNVFKNQNSLAQIMEMQKSVMPPMPPFIDPYMALYSSLGQMDQRQLAAYRDLANQFKYSNILNIGVANTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-