Ecoc033754.1
Basic Information
- Insect
- Endomychus coccineus
- Gene Symbol
- stc
- Assembly
- GCA_958510875.1
- Location
- OY294069.1:237599-241359[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 6.2e+04 -4.8 3.4 6 10 381 385 378 385 0.69 2 14 0.087 2.7e+03 0.2 0.4 4 10 411 417 410 417 0.96 3 14 9.1e-06 0.28 13.0 11.6 3 18 425 440 424 441 0.94 4 14 5.3e-09 0.00016 23.3 11.6 1 18 477 494 477 495 0.98 5 14 0.41 1.3e+04 -1.9 1.2 6 10 525 529 524 529 0.90 6 14 9e-08 0.0028 19.4 12.3 1 18 535 552 535 553 0.94 7 14 1.8e-06 0.057 15.2 15.2 4 18 600 614 593 615 0.87 8 14 1.4 4.2e+04 -3.6 2.0 5 10 644 649 644 649 0.93 9 14 0.0048 1.5e+02 4.3 9.0 1 11 655 665 655 666 0.96 10 14 1.5 4.6e+04 -3.7 0.8 4 10 670 676 669 676 0.69 11 14 2.3e-10 7e-06 27.7 13.5 1 18 682 699 682 700 0.98 12 14 0.00059 18 7.2 14.2 1 19 739 756 739 756 0.89 13 14 1.4e-05 0.42 12.4 18.6 1 19 792 811 792 814 0.96 14 14 0.0052 1.6e+02 4.2 15.3 1 18 821 839 821 840 0.93
Sequence Information
- Coding Sequence
- ATGAATCCTGAAAATTCTCGGTCATTTTATAACGCTCAATCGAGTGAAGTTGAATCTAATCCAGGAAGTGTTAGATCCTCTAACGTGGGTCAAGCAGAACAACATCCATCCACTGGAAATAATTCCCAATATCCGACTGGTGTGAATTCTGCCGGAGCAATAAAGAAGCAATACCGTTATAAAAATTCCGCTGATTATGTTCAGGGTGGAGGACATAGGAATAATCACCGAGAGAACAATTTCAACCAAAACCAACGAGAATCTGAGATATTCAATGGATATAGAAGTTCTGCAAATTATGTGCAAGGAGGATATAGGAATAATCATCGAGAAAATAACTATCATCAAATTAACCAAGAATCTACCTTGTATAATGGAATATCTAAAAATTATACTGGATCTCTATCAAATGATGcatttcatcaaaatcagtTACATTTCGAAAAACAGACTGGCATATTATATGACGATTTTTCAGAAGGTTACACTGCAAGAGGGATTAATGTGAAGGCAAGTACAAGAGGACgtgataaaaattatattagaaaTGTTAGAACACAGTACGATATAGATGGCTATAAACAAGGAGAACGAAGGAATGGAGCATATGGTAGGCCAGGATATAGTGGAGAATCATTAGATTCCTACAATTAcgattattttaataattccaAATCAAAGCATTTTCCATATGGAGACATGCAAAAACCCAATCGTGATAGTACCAACATGCAAAGCTACAGTGGTGCACAAAGTGATTATCATGGACCCCAAAATTATGCTAATGAAGGttattttcacaaaaatttCGTTAATTATAATAAGAATATGAAACCTGATAAATATTATGGGAAACATAATTCACGAAGCAAAGATCATTGGAAAGGAAATAATGGGAATGCtagtaaaaaaatggaaaacaaTAAAGCAAGGATGGAGAAGTTGGACGCCGCATCCCAACGCGAGAGATTGGAAGAAATGATCACCAGAAGAACTTTGGAGTGTTTAGTTTGCTGTGAAATATTTAAACACAATGACAAAATATGGTCGTGCAAACAGTGCTATCACATTCTCCATTTGAAATGTACAAGAGCTTGGGCCAATTCATCTAAGCTGGAAAACGGATGGCGATGTCCCGCGTGCCAAAACGTCTGCAATGAAATTCCTTCTCATTATAAATGCTACTGCGGCAAAACGAAGGACCCGCGCAGAGAACCAGGTCTAACACCGCACAGTTGCGGTGAAGTATGTCAGCGAAAAAGAAGAATTTGTGAACATAACTGCATTATCTTGTGTCATCCAGGTCCATGTCCCGATTGTGTAGCAGTAGTCTCAAAAAATTGCGGGTGCGGACAGACCCAACAGCAAGTAAAATGTAGTTCCGACGTGGAGATAATCTGTCAGGGCGTTTGCAACAAACAACTAGAATGCGGTCTGCATCGTTGCGAAACAAAATGTCACGTCGGCGATTGCGAACCGTGCGCCGAAGTTTTAAGGCAAGAATGTTATTGCGGCAAAGTGGGAAGAATTACAGCTTGCACTgacgcccaacgtggggccacGCGATATTCATGCGAAGAAGTATGCGATAAATTGTTGACTTGCGAAAATCACAAGTGTAAGGAGATTTGTCATCCAGGTAGATGCGCACCTTGTGTTAACGATATTAACCTTATCAACACGTGCCCTTGCGAAAAAACTACGTTAACTATCAAGCGAACATCTTGTTTAGATGAAATTCCCGCTTGCGCGAAAAAATGTGGAAAATCGCTAAATTGTGGACAGCCGAACGCTCCTCATAAGTGTCAATCGTCTTGTCACGGGGGCGATTGCCCTCCATGCGGCTTGACTACCGTGATGAAATGCCGATGCGGTCATATGGACAAAGAAGTGCCTTGTAAAAATGTGACTACGAAAGCGGACGACGCGCGTTGCGAAAAGAAATGCACGAAGAAACGTTTATGCGGCAAACATCGTTGCAATCAGCGTTGTTGTATCgaaatcgaacacttttgtCCGTTGCCCTGCAATCGTAACCTCACTTGCGGTAATCACAAGTGCGAACGTACGTGTCACAGCGGGAGATGTCCATCTTGCGTCGAGACCAGTTTCGACGAATTGTGTTGCGAATGCGGCGCTAGTATCTTATTTCCGCCGATTCATTGCGGCACGAAACCTCCCCTTTGCGATAAACCTTGCGGTAGAGAGCGCTCGTGCGGCCACCAAGTCAACCACGCTTGCCACACTGGGCCGTGTCCTCCATGTACAGTGCTTAGTAAGAGATGGTGCTACGGTAAACATGAACAACGCGCTGCTATTCCGTGTCATCAGGAAAGTTTCAGTTGCGGATTGGCTTGCGGCATGGAGTTGCCTTGCGGTAAGCACGGCTGCGTCAAGCTGTGTCACTTAGGTCCATGTCCCACCCCTTGCAAACAACCATGTACAATAGTGAGAGCTTTGTGCGGACACGGATGTAACGTACCGTGTCATAAGGAACCATGTCCTAAGACTAGTTGCAAAAAAGCCGTGCTAGTAACTTGTATGTGTGGACATCAAAAGAGTAGCAAGCCATGTAACGATCTGGTTGAAGAATATAAGAATTTAGAAGCTGCTTTGATAAACGAGAAAATGTCGAACCTGATCAAGGATCAGACTGTAGATATTACAGACATCGCTAAGCTGAGAAGACCAGAAATACTGAAGATACTTGAATGTACAGAGGAATGCCGTGTTCTGGAGCGAAATAGACGCCTGGCGATCGGCCTACAAATTCGCAATCCGGACATCAGTCAGAAACTTACGCCACGTTACTCGGACTTGATGAGAAACTGGGCCAAAAAGGATCCTCATTTTTGTCAACGAGTTCACGATAAACTTACAGATCTCGTACAATTAGCCAAACAGAGTAAACAGAAGAGCCGATCTTATTCATTCGAATCCATGAACCGAGATAAGAGACATTTCATTCACGAATATTGCGAACATTTCGGTTGCGAAAGTGCTGCTTACGATTTGGAACCGAACAGAAATATCGTCGCTACGGCCACTAGAGACAAATCTTGGTTGCCCGGTATGAGTTTGTTGGAAATAATTCAGAGAGAAAATGGTCAAAGGAAAGTACCGGGACCTACACTTTTGggaaaaaatttcatcaataagTCCGAGTCTGTTACTTTGAAACTACCAGGAAGAAATCAAAAAGTCAATCCATCACAGGGTGAAgtggttgattatttcaataatccTCCTACATAA
- Protein Sequence
- MNPENSRSFYNAQSSEVESNPGSVRSSNVGQAEQHPSTGNNSQYPTGVNSAGAIKKQYRYKNSADYVQGGGHRNNHRENNFNQNQRESEIFNGYRSSANYVQGGYRNNHRENNYHQINQESTLYNGISKNYTGSLSNDAFHQNQLHFEKQTGILYDDFSEGYTARGINVKASTRGRDKNYIRNVRTQYDIDGYKQGERRNGAYGRPGYSGESLDSYNYDYFNNSKSKHFPYGDMQKPNRDSTNMQSYSGAQSDYHGPQNYANEGYFHKNFVNYNKNMKPDKYYGKHNSRSKDHWKGNNGNASKKMENNKARMEKLDAASQRERLEEMITRRTLECLVCCEIFKHNDKIWSCKQCYHILHLKCTRAWANSSKLENGWRCPACQNVCNEIPSHYKCYCGKTKDPRREPGLTPHSCGEVCQRKRRICEHNCIILCHPGPCPDCVAVVSKNCGCGQTQQQVKCSSDVEIICQGVCNKQLECGLHRCETKCHVGDCEPCAEVLRQECYCGKVGRITACTDAQRGATRYSCEEVCDKLLTCENHKCKEICHPGRCAPCVNDINLINTCPCEKTTLTIKRTSCLDEIPACAKKCGKSLNCGQPNAPHKCQSSCHGGDCPPCGLTTVMKCRCGHMDKEVPCKNVTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHFCPLPCNRNLTCGNHKCERTCHSGRCPSCVETSFDELCCECGASILFPPIHCGTKPPLCDKPCGRERSCGHQVNHACHTGPCPPCTVLSKRWCYGKHEQRAAIPCHQESFSCGLACGMELPCGKHGCVKLCHLGPCPTPCKQPCTIVRALCGHGCNVPCHKEPCPKTSCKKAVLVTCMCGHQKSSKPCNDLVEEYKNLEAALINEKMSNLIKDQTVDITDIAKLRRPEILKILECTEECRVLERNRRLAIGLQIRNPDISQKLTPRYSDLMRNWAKKDPHFCQRVHDKLTDLVQLAKQSKQKSRSYSFESMNRDKRHFIHEYCEHFGCESAAYDLEPNRNIVATATRDKSWLPGMSLLEIIQRENGQRKVPGPTLLGKNFINKSESVTLKLPGRNQKVNPSQGEVVDYFNNPPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -