Basic Information

Insect: Endomychus coccineus
Gene Symbol: -
Assembly: GCA_958510875.1
Location: OY294070.1:124266451-124299319[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00021 0.05 15.8 2.4 1 23 1667 1689 1667 1689 0.97

2 18 0.01 2.4 10.5 1.5 1 20 1695 1714 1695 1717 0.93

3 18 3.6e-05 0.0086 18.2 0.8 1 23 1723 1745 1723 1745 0.98

4 18 1.2e-05 0.0028 19.7 4.3 1 21 1751 1771 1751 1773 0.95

5 18 6.3e-05 0.015 17.4 4.6 1 23 1779 1801 1779 1801 0.99

6 18 4.4e-05 0.01 17.9 4.7 1 23 1807 1829 1807 1829 0.97

7 18 1.8e-05 0.0043 19.1 7.2 1 23 1835 1857 1835 1857 0.97

8 18 2.3e-07 5.6e-05 25.1 2.7 1 23 1863 1885 1863 1885 0.98

9 18 0.00017 0.041 16.0 6.7 1 23 1891 1913 1891 1913 0.97

10 18 0.00023 0.056 15.6 4.8 1 23 1919 1941 1919 1941 0.97

11 18 1.1e-06 0.00026 22.9 2.8 1 23 1947 1969 1947 1969 0.98

12 18 8e-05 0.019 17.1 8.0 1 23 1975 1997 1975 1997 0.98

13 18 6.7e-05 0.016 17.3 9.1 1 23 2003 2025 2003 2025 0.98

14 18 4e-05 0.0096 18.0 7.7 1 23 2031 2053 2031 2053 0.98

15 18 2.6e-05 0.0062 18.6 7.1 1 23 2059 2081 2059 2081 0.97

16 18 0.00019 0.046 15.9 0.5 1 23 2087 2109 2087 2109 0.97

17 18 0.05 12 8.3 5.6 1 23 2119 2141 2119 2141 0.98

18 18 1.2e-06 0.00029 22.8 1.3 1 23 2147 2169 2147 2169 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00021	0.05	15.8	2.4	1	23	1667	1689	1667	1689	0.97
2	18	0.01	2.4	10.5	1.5	1	20	1695	1714	1695	1717	0.93
3	18	3.6e-05	0.0086	18.2	0.8	1	23	1723	1745	1723	1745	0.98
4	18	1.2e-05	0.0028	19.7	4.3	1	21	1751	1771	1751	1773	0.95
5	18	6.3e-05	0.015	17.4	4.6	1	23	1779	1801	1779	1801	0.99
6	18	4.4e-05	0.01	17.9	4.7	1	23	1807	1829	1807	1829	0.97
7	18	1.8e-05	0.0043	19.1	7.2	1	23	1835	1857	1835	1857	0.97
8	18	2.3e-07	5.6e-05	25.1	2.7	1	23	1863	1885	1863	1885	0.98
9	18	0.00017	0.041	16.0	6.7	1	23	1891	1913	1891	1913	0.97
10	18	0.00023	0.056	15.6	4.8	1	23	1919	1941	1919	1941	0.97
11	18	1.1e-06	0.00026	22.9	2.8	1	23	1947	1969	1947	1969	0.98
12	18	8e-05	0.019	17.1	8.0	1	23	1975	1997	1975	1997	0.98
13	18	6.7e-05	0.016	17.3	9.1	1	23	2003	2025	2003	2025	0.98
14	18	4e-05	0.0096	18.0	7.7	1	23	2031	2053	2031	2053	0.98
15	18	2.6e-05	0.0062	18.6	7.1	1	23	2059	2081	2059	2081	0.97
16	18	0.00019	0.046	15.9	0.5	1	23	2087	2109	2087	2109	0.97
17	18	0.05	12	8.3	5.6	1	23	2119	2141	2119	2141	0.98
18	18	1.2e-06	0.00029	22.8	1.3	1	23	2147	2169	2147	2169	0.97

Sequence Information

Coding Sequence: ATGAATTGTTCAGACATTATATTACTTCAAGAAACCAATGTCACGGAATTACCAACTTTCTCACGTGACacaaaatatgatttttatatCAACCCTGTAACAACAAATTATACCGGAACAGCAATTGGCTTAAAAAGAAATTGCTCGATCACCATACAAAATCATGAAATCATTCTCGAATCATATCTTCAATCAGCTCTAGTAACAATAGATACATTTAAATTACATATCATAAACGTATATATTCCACATGACCGCGAAATTGCACTCAAAATTAGTTCAAAACTATCCGAAATCCTAGAAAATTTAGATCAGAATGACAATGTAATTATAGGAGGAGATTTCAATTGCACTCCAAATCCGCACTTAGATCGGTATGGATCTACCGAAAGGTATGCTACATTTGCGGAAACGctcgagaaaaacttcacacATTGTGGACTGAAAGATTCTTGGAGACATATCAACAAGAAAGATGTTGGCTTCACACATATCAGCTCTATAACCCCTATATCCGCCTCACGGCTTGACAGAATTTACATCACGAGAAAACTATTAAACGACCTGATATCAGCtgatgtgaaaaattctttctcAGACCACCTAGCGGTGACTATAAAAATAAGAATTACAACAAGAAATAAAGTATATCCGCCTTACTGGAGGTTCGATAATGCGTTATTGGAGGATACGGACTTCAAAGATAATATGAATACGTTCATTGTGAGTGAAACCAAGCAAATACCGGCAGGTTGCGACATGATAAAATGGTGGGAAAAGTTTAAAATAGATCTAAGAAATATGACGATACTATATAATAGGCAAAAATATAAGACAAGACAGATAGAAATCAGACAGCTGGGAGAACAAGTGAAAAACGCGATTGCCTCATCCAACCCCTCTGAAAGTGAAATCAAGAGACTATTAAACATTACAAAACGCTCACAGGATGCATACAAAAAAACTAGCGAAAATATCTTGAGAAAAATGAACTACGAAAAACTGATTGACACAGACTCACCAATAATCAACAAAAAAGCCTTTTGTACCTTTAAACATCTGAATAAACTCAAAGTGGGAAATAATATCATCCAAAAACCTTCAGAACTAACTAGCATAATAGTAAAACATTTTGAATCAATATACGCCAAGGACACGACTGCGAAAGTGAACCAAAAATGTGAACTGTATTCTGATATCAAGAAAATTACTAGGGAAGAGAAAGAACAACTGAACGCCAGCTTTACAGAAGAAGAATTCACTACGGCTCTTCTGTCTCTGAATAAGAACAAGGCACCAGGAATAGATGGGCTAACAGCTGAGTTTTACATAACATTTTGGgatgaattgaaaaatacatTCGTGATTGTCAACAAAGAAATAATTTCGAGACAAAGCTTACCCAAAACATCATCAAAGGCTATAATCACTCTCACTCCGAAAAAAGGTGACCTAATGGAATTGGAGAACTGGCGCCCGGTATCACTTCTAACAACAGATTATAAGATCTTAGCAAAAGCAATATCTACCAGATTAACTAATGTAATCGATAACATAATAGGACAGGAACAAAGCTATTCAATACCAAACAGAACAATCTATGACACCCTACATTTACATCGTGACACCATATTTTATGCAAACAAGGAGCAGGTTCCCTTAGCAATTCTCAATCTAGACCAAAAATCTGCATTCGATAAAATTCATCACGACTATATGTTTCATGCACTTGAGGGAATGGGTTGCGGGGAGTTTTTCATTAAGGCTGTTAAAACATTATATAAGGATGTAAAAAGTCACGTACGTGTGGGTTCATTACTTACCCGGGAGATATCTTTTAGAAGAGGGATTAGACAAGGATGCCCACTCTCTGGACCATTGTACGTTTTATCCATAGAGCCATTCTTACAAATGTGTCGGAAAAAACTTCACGGATTAACGATACCAtcgaataacaatataaaaataacgacTGCGGCGTACGCTGACGATGTATCCATTTTTATAACCAACGAAAAAGATTTCAGAATATTTGCCAAAATTCACAGCATATATGCGAATGAATCTGGATCAGAGCTTAATTTCAACAAATCGGTTGGATTTTGGACTGGAAGCTGGACACAACGTAAGGATGAACCCATCAAGGTAACTTGGACATCCAAAAACATCACTGTATTAGGAATAACTCTCTCAAATGATATCAACACAGACACAGAAAGAGCTTATCAGAAAATGATTGACAAAATAAGCCAAGCACAAATGAAATGGCAACATAAAATGCCTAGCCTATCGCTCACCGGAAAAAGAATTGTGATCAATCAATTTATTGCACCAATACTTTGGCATTATTTTCAGATACTTCCATTTAATACAGGACAAATAGAAACTCTGCAAAAAAAGCTAACAAACTTCATGTGGAACGGGAAGCATTGGACGCAAACGATGGATCTATGTTTAAATATAGACAAAGGTGGGTTAGGGTTAGTCCATTTACAGTCGAAATTAAGAACATTCAGAATATGGTTGGCACACAGATTCATTAATGCAACAGAAAAGCAAAACTGGGCTGTGTTGATGAAATATCTTTTACAGAAATCCAATGGTAATGGTATGTCGTGgcaaatattatttatgttgaaaaaaaatgtgagCAATCAAAATGCATCTTCCTTTATCGAGTCATTGAAAGATGTAATGCAAGAAACATCtgatatacatatacataattTCCCGTCGaatataaatgatttaaaaaatatccCAACAGAAAAATCTCGCCTAATAAAAAATAGTGTACCACCCATTTTCAATTCCATGTGGAATAAGATAGGATTCAAGAAGGTAGAAGACTTCATTGAAAACAACGAATGGATCAAACCGGAGGTAATGATTAGAAGACTCAGCGCCAGAGCGCTCTCACCATTATTTGTAACAGAGCTCTCTATCCAGTATAATAGAATTAAATGTTTCTTTTCTTTACATTATGCCAACGCTATTAGAAATAAATGCTCTGATAGGAAGGAGTTTACACTCACATTTTCAAGCAACAACGACATGGaggtaaaattaacaaaatcctCACGGAGAGAACTTCAGCGTAATCTAACCGCTGAATTCTATGGCCTTagcaaaacaaatattatgaatggCAGCTGGACAGATGACGAGATCAACTGGAAATCATATTTTCAAAAACCAACCTTAGGTTTTGAGGCTGAAACAGCCTGGCGTTTCGCCAAAAATAGATTAGCTGATCCGGTATTTTGTAAGAAAGCAGGCTTCCAAGAAAGTGATAATTGTCCGTTCTGTCCCAATCATCTAGGGACTGCTTGGCATATGATTATGACATGTTCAAGAACTAAAGATCTATGGAACCTCGTGAAGACTCTCCTTAGACTTCTAAGGAGAAGTGAAAATATTCTAGTAAAGGATCTATATGTAGGATATCCTGGGAAATCTATAAACATCAACCTAGCTAATTATATCATCAACTTCgctaaacatattatttattcaacgATGACGAATTTCTTGAAAAACTCTGCTGAATTCGATGACTATTCGACGATATTCACGAAAAAAATCAAAGCGAGAATACTTACCGAATATGCTTACTTCCTTGGAAGGGATAATCTGGAAAGTTTTCGAATTATGTGGTGTCCCGAAGGTTCAGTTGTGACCCCACATTGCAAATACTGTGGCGAAGGTCAAATAGGGATTCTAACGAACCGATCTGAACGATTTGAAGTGTGGGTCATATTGATTGATTCGTCAAATATTTATAATGGATTCCATTCTCACAAAGATAATATGTTACAGACTGCTACCCAGAGGTCTTTACCGGCTACCACGATTCCCACCGATTTGAGAGTGAATACAACAGCTCTTAACACCGTCGCTCTGAGTAGTGTCGCTAAATACTGGGTTCTAACCAATCTTCTAACTGCCCCAATACCACAGGTGTCGGTTTATGGACTTCCAGGAACTGGACGAGGAGATAACCAGACTAAATTGTCTCAGGAAGCGATGTTGTCTCAACATGGAGGTCTTTTGCCCGGAGATCCTTTGCTTTTGCAACAACATGCACAGATACCTGTCAGTATAGCTACATCACAAGGACTTGCAAATCTAACAACACCATCAAGTGCCATGCATCTTGAAAACCAACACGGCCACAATTCATTGTCGCATCATTCTCAACAGCAATCGGAGAACATCTCTAACCAAAATCAGATGACAAGAGAGATGTCCCATTCGCAGCCCCACTCTCAACAGCAACATTCTCAACACAACCACTCTCAGCAGAACATGGTACAGGTCCAAGTGCAAGATAACTTGGTTTCGGTGATAGAAGACAACAAGGACCACAAAGATATTATAACGGCACAGTTAGCACAGGCTCAAATACATCTGAGCGAAAATCAACATTTAGCTCAACAAACGTTGACTGTTCAACAGCTTCAACATCAAGTTCAGCAAGTTCTGGACAATGTGGTTCGTTTGGAAAATTCCGTTGAAAACAATCAAAATCAATCCAACAACGAACAACAAGTCCACATAACCGACAGCATCCAGATAATCAAAGACGAAAAAGGCCTACAGAATTGCAAGATTCTACAGAGCGCCCAATTCGGCTTGCACGATCTGAAAAACAACCTGTTGGACGTGCGCACCACGGACGGCACCCTCGTCAAAATATCCACCAATATGCTGGAGCAGGACCTGAGAAACACGCTAGGTGGCGAGATGGTGCAGAACATGTACAAAGTGAACGTGGACGATCTGAACCAATTACTAGCATATCACGAAGTGTTCGGGAAGTTACAGGGTGAGATTCCGAATTCGGGGGGACAGACTATTACACAGAACGCGGGGACCAACGTGAATAACGTGAATATACCGAACACGAACAATCTGAGTATAGTGACAAAGGACGAACACGTAGCTGGTACTAGTAGTTTGACGCCGGAAAATGGACCGCAGATCATTACGGGTACGCATGTTTGCGATCTTTGTGGGAAGATGTTCCAGTTCCGATATCAGCTGATAGTCCATAGGAGGTACCATACAGAAAGAAAACCTTTCACCTGTCAGGTCTGTGGTAAAGCTTTCTTGAATGCTCAAGAGCTCACGAGACACGGCAAATGTCATCTGGGAGGCAGTATGTTCACATGTGCCGTGTGTTTCCACGTTTTCGCCAACGCGGCTTCTTTGGAGAGACACATGAAACGACATTCAACCGACAAACCGTACAGTTGTACGATTTGTGGCAAGTCGTTTGCGAGAAAAGAACACCTGGAAAACCACACAAGGTGCCATACCGGGGAAACCCCCTACAGATGCCAATACTGCGCGAAAACCTTCACCAGGAAAGAGCACATGGTCAATCACGTGCGAAAACATACGGGAGAAACGCCGCACCGCTGCGAAATCTGCAAGAAATCGTTCACGAGGAAAGAACACTTTATCAATCACGTGATGTGGCATACCGGGGAAACGCCCCATCATTGCACCGTTTGCGGCAAGAAGTACACCAGGAAAGAACACTTGGCCAATCACATGAGATCGCACACGAACGACACCCCGTTCCGTTGCGAGATCTGCGGCAAATCGTTCACCAGGAAGGAACACTTTACCAATCACATAATGTGGCATACCGGGGAAACGCCCCATCGCTGCGATTTCTGTTCGAAGACTTTCACCCGCAAAGAACATCTGTTGAATCACGTTCGTCAGCATACCGGCGAATCGCCTCATCGTTGCGGATTCTGCGCGAAATCGTTCACGAGGAAAGAACATCTGATAAATCACGTGCGCCAGCATACCGGAGAAACGCCCTTCAGATGTAGCTACTGTCCGAAAGCTTTCACCCGCAAGGACCATCTGGTTAATCACGTCAGACAACACACGGGCGAATCACCGCACAAGTGTACTTTCTGTACGAAATCGTTCACGAGGAAGGAACACTTGAACAATCACGTGCGACAACATACTGGGGAATCCCCGCACAGATGCCACTTTTGCTCCAAGTCCTTCACGAGGAAAGAGCATCTCACCAATCACGTCAGGATTCATACAGGCGAGTCGCCTCATCGCTGCGAGTTTTGTCAGAAAACGTTCACTCGCAAAGAACATCTGACCAACCATCTGCGACAGCACACCGGCGAGACGCCGCATTGTTGTAACGTGTGTTCTAAGCCGTTCACCAGAAAAGAGCACCTCATCAATCATATGCGATCGCATACGGGCGAAAGACCGTTCGCCTGCACCGAATGCGGGAAATCGTTCCCGCTCAAAGGCAATCTGCTCTTCCACCAGAGGTCGCACAACAAGGGCGAAACTGCGGACAGACCGTTCCGATGCGATTTGTGCGATAAAAACTTTATGTGTAAGGGACATTTGGTGTCGCATCGGAGGTCTCACAGCGGCGAGAGGCCGCATTCTTGTCCGGATTGCGGGAAAACGTTCGTGGAAAAAGGCAATATGTTGCGACATCTACGTAAACACACGAACGAGAACGGTCAACTGAATCCGACCCAAACGTCTCAATCTCAACAGCAATCGTTGTCGAACCAAGTGCAAGTTACCCAACAATCCAATACCCAGGTGTCGGCAACTAGCTTACAGATACCGCAAGTGAGCCAGCCGCAACAGACAAGTCCTCAGAGCAATATAGTGACGCAACAACAGCAACATCTGTCCATGCATCCCCCTAGTAATCACCCCGTCGTAGTGCCTACAGCGAACGTCAACGTGTTAGCCAGTTATTGA
Protein Sequence: MNCSDIILLQETNVTELPTFSRDTKYDFYINPVTTNYTGTAIGLKRNCSITIQNHEIILESYLQSALVTIDTFKLHIINVYIPHDREIALKISSKLSEILENLDQNDNVIIGGDFNCTPNPHLDRYGSTERYATFAETLEKNFTHCGLKDSWRHINKKDVGFTHISSITPISASRLDRIYITRKLLNDLISADVKNSFSDHLAVTIKIRITTRNKVYPPYWRFDNALLEDTDFKDNMNTFIVSETKQIPAGCDMIKWWEKFKIDLRNMTILYNRQKYKTRQIEIRQLGEQVKNAIASSNPSESEIKRLLNITKRSQDAYKKTSENILRKMNYEKLIDTDSPIINKKAFCTFKHLNKLKVGNNIIQKPSELTSIIVKHFESIYAKDTTAKVNQKCELYSDIKKITREEKEQLNASFTEEEFTTALLSLNKNKAPGIDGLTAEFYITFWDELKNTFVIVNKEIISRQSLPKTSSKAIITLTPKKGDLMELENWRPVSLLTTDYKILAKAISTRLTNVIDNIIGQEQSYSIPNRTIYDTLHLHRDTIFYANKEQVPLAILNLDQKSAFDKIHHDYMFHALEGMGCGEFFIKAVKTLYKDVKSHVRVGSLLTREISFRRGIRQGCPLSGPLYVLSIEPFLQMCRKKLHGLTIPSNNNIKITTAAYADDVSIFITNEKDFRIFAKIHSIYANESGSELNFNKSVGFWTGSWTQRKDEPIKVTWTSKNITVLGITLSNDINTDTERAYQKMIDKISQAQMKWQHKMPSLSLTGKRIVINQFIAPILWHYFQILPFNTGQIETLQKKLTNFMWNGKHWTQTMDLCLNIDKGGLGLVHLQSKLRTFRIWLAHRFINATEKQNWAVLMKYLLQKSNGNGMSWQILFMLKKNVSNQNASSFIESLKDVMQETSDIHIHNFPSNINDLKNIPTEKSRLIKNSVPPIFNSMWNKIGFKKVEDFIENNEWIKPEVMIRRLSARALSPLFVTELSIQYNRIKCFFSLHYANAIRNKCSDRKEFTLTFSSNNDMEVKLTKSSRRELQRNLTAEFYGLSKTNIMNGSWTDDEINWKSYFQKPTLGFEAETAWRFAKNRLADPVFCKKAGFQESDNCPFCPNHLGTAWHMIMTCSRTKDLWNLVKTLLRLLRRSENILVKDLYVGYPGKSININLANYIINFAKHIIYSTMTNFLKNSAEFDDYSTIFTKKIKARILTEYAYFLGRDNLESFRIMWCPEGSVVTPHCKYCGEGQIGILTNRSERFEVWVILIDSSNIYNGFHSHKDNMLQTATQRSLPATTIPTDLRVNTTALNTVALSSVAKYWVLTNLLTAPIPQVSVYGLPGTGRGDNQTKLSQEAMLSQHGGLLPGDPLLLQQHAQIPVSIATSQGLANLTTPSSAMHLENQHGHNSLSHHSQQQSENISNQNQMTREMSHSQPHSQQQHSQHNHSQQNMVQVQVQDNLVSVIEDNKDHKDIITAQLAQAQIHLSENQHLAQQTLTVQQLQHQVQQVLDNVVRLENSVENNQNQSNNEQQVHITDSIQIIKDEKGLQNCKILQSAQFGLHDLKNNLLDVRTTDGTLVKISTNMLEQDLRNTLGGEMVQNMYKVNVDDLNQLLAYHEVFGKLQGEIPNSGGQTITQNAGTNVNNVNIPNTNNLSIVTKDEHVAGTSSLTPENGPQIITGTHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYSCTICGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFINHVMWHTGETPHHCTVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCAKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACTECGKSFPLKGNLLFHQRSHNKGETADRPFRCDLCDKNFMCKGHLVSHRRSHSGERPHSCPDCGKTFVEKGNMLRHLRKHTNENGQLNPTQTSQSQQQSLSNQVQVTQQSNTQVSATSLQIPQVSQPQQTSPQSNIVTQQQQHLSMHPPSNHPVVVPTANVNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -