Ecoc015709.1
Basic Information
- Insect
- Endomychus coccineus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_958510875.1
- Location
- OY294067.1:204513791-204519473[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.013 31 6.5 0.0 22 46 260 286 239 286 0.74 2 5 2.1e-07 0.00051 21.8 0.0 1 45 292 338 292 339 0.94 3 5 3.8e-08 9.1e-05 24.2 0.0 1 43 345 391 345 393 0.96 4 5 2e-05 0.049 15.5 0.0 1 45 401 445 401 446 0.96 5 5 0.012 28 6.7 0.0 1 43 452 494 452 496 0.92
Sequence Information
- Coding Sequence
- ATGTATTACAAAGAATTATCGTTcattaattatataaatatatctattttACAGAACAATTCACATCTTCAGTTTGAGGAATTCATACTAGCCAACAGCGAGGACGAAGaatctgaagatgaaattacAACCGACTCGAATGTAAGGGTTTCGGAATGCATCGAtgttaaaacaaaatatattttcccAAATCATGTGGTCGAGACAACACTTAAATCAGAAGAAAGAACATTAATTGAATCTTGTGAAGATGGCGAGTTGAGTAAACTGTTATTGTTGAATAGAGCAAAAAACATGCAACTTATACaactttataaaaaaatcaaagatTTGCTGCTTGAATGTCAAGAAACAATAAAATGCAAAGAAACGCTACTAGAGACTGGTGGAGATAATGTAAACCATACTTGTTGCGCGTACAAGCTTGCTGCTCCATACTTCAAGACAAAGTCTTTGTATTTAAGTCCTCCAAATGAAGACACAATAAACCGAAGAAAGATCAATGAATTGTCCATTTATGAAATCAGACCGACGGGAAAATGGTCAAGAATGGAATGTGATAATTTGATAAGATCTGTCAGAGTAAATTATAATATCAACAGACAAATGTCTATTAATAAACAGTTGAATACTCTACacctaaaaaaaaataaagttcaATTCCAAGATCAACTAAATGAAATGACTGCAGAAATAAATGCCTTGGAAAACAATCTGGAATATATCAAAAGTGTGGGGGATAATGATGTACCACCTTTGAATTCTAATGACCATGTTGACTGGCTAAGAGTGGCTGAGACATTTCTGAAGGATAAGCACACCCCCGAAGAATGCGAATCATTCTGGCATTTATATTTAAATCCACATATTAATAAGACTAGTTGGTCTAATGAAGAGAATGAACAAATACAAGAACTTGCGTCTGTATATCAGTATCAAGACTGGGATACCATCGCTTTAACGTTAGGCACCAATAGAAGTGGTTTCGCAGTATGTCTCCACTACTTCAGTAACTTATGCGCGAAATTCAAACGGAATAAGTTTACCAATGAAGAagatgaattattattagaaaCCGTAGAAAAAGTGAGAATTGGCAGTTACATTCCTTGGAACATAGTTGAACAGTATTTTTCGAATCGGTCACGAAACCAGTTGCTTCACAGGTACAAATATTTTAACCGACACTTGAATATAATACGCGGTAAATTTACTGAAGCTGAAGATATTATGATAATGATTTTAGTTGATAGATTCGGTAGAAATTACTCACAGTTTGTGAAATACATTCCCCATAGGTCTTGCATGCAAATAAAAAGCAGATACAGCTCTAATTTAAACATCGACATTAAGAAAGGTTCCTTCACGGTAGACGAAGATagaataatattaaagtatggTGACAGCGAAAGTTTCAAACATTGGGGTTGTCTCACTAGTATGTTGAAGAGAAGTAGAGGTCAGCTACGACAAAGATTCAGGAtaatcaaatcctttttgagaGACAATCCTGATAAGACTGTTGAAAACGTCACTAAACGTATACATCGAAGTTACAACAAGGAAAAAAATCACTACCAGTTTTTAAGATGCATGGCAGACCAGTGTAAAGAATTGCAATATATTCCAACATTGGAAGTAATAGAAAATATGTTGGGTATTAAAAAATCCAAACGGAGGGTTGCTAACACAGGGGGGGAAAAGATTGTTGctaaaaaaaatgttggatTGAAAGATATTGACTCTATGCTGGTAGATTTTTTCAGCACATCTTGTAATATAAATCATAAGCAAAATGAAATTATGCCCAGAAAGATAATAGAAGGtgcagaaaatatttttgacattttaCAAGACTTTTCTGTAGAACTGGATCTACCTGAagatattgaagaaaatgaatatttagatCATATTGATGTTGAAATTCTTAGGCATATTCAACAAAAACAGAAAGTTATAACAACAGATGTCTCTTCATCTCATATCCACAGATACATACCCccaaatacaaacacattaacaggTTTGAGAAGCATCTTAATAAAGAATAAACTtcataaaagaaaaataaaaaataaggaAAGTTTACTCGATATGGTAAAACCGAAAAGAAATACGAATGATACTGACATTATCTGGCAAATTGAGAAAAATCTGGCGCGCCTTGACGAAGTCactaaaaaaattgtaatcGATGAGAGAAATAAATTTTGCGAAAGATTTAGGTCATTATTCTGGTGGCCATCTCTCCTATCCCTAGAACCGCCGAATCCGAATTTACTAACGTCGGAATTAgggattgaaaatcaaaattgtgatCTAAACAATGATCAAGGTgataaaaaaaatctgaaaaatagtAAGAATCAACCCAATTCTTCAAATAAGCGGCCAACGACTAAATATGTGGATTTACCAGCCAAGAAAATTAAATTGTCTGTGCCGAAAATTGATCAATTAAGTGCTGCCAGTAAAATGAATCTCAAACCAGTTGATAAAAGTGTTATCACTAAAATGGTACTAAATGGGAAAAGGCCAACCATGTTTCTagtaaaaaatacaaaatctgTTGATGGTACTGTTAATACTGTGATGGAACCAATATCCGATATCAACAAATTCCTTGGAAATACACATACTGTCAATTCAAATCTTGGTGTTGACTCACATCAATCTGCAGAACCTGCTATTTGCACTGTAGACTTAACCACAGATTTAACACTGATAGAAAACCCAAGTACAAAATCTATATCTGATGCTAGAATAAATCTTAAGAGATCCCATACCAAAAACAAAGTTGAGGGAGGaagtattatttcaaaaaacctGCAAGCACAAGTTCAAGCTAGATTCAAAAATGTTCTCAAGAGATCTGCAGTCAATAAGTTGCCTGAAAAAGTGCATTTGAAAGTTTGTGAAATGAGGAATAATGTTTCTCAGCCATCTATAGTTACTAAACATAAGGAACACAGCGAATCCAGTACAAAAAATGAGGAATtgaaagatattgaaaaattaaattctgttCTAAATGGGGCGAGCTTGAATAAAGCACATCTGATTAAGGACTGCAGTGAAAATgaacttttgaaaaatgatgTTGAACTTTTACATGAATTGATTAAGTATGAaagaaatatgtaa
- Protein Sequence
- MYYKELSFINYINISILQNNSHLQFEEFILANSEDEESEDEITTDSNVRVSECIDVKTKYIFPNHVVETTLKSEERTLIESCEDGELSKLLLLNRAKNMQLIQLYKKIKDLLLECQETIKCKETLLETGGDNVNHTCCAYKLAAPYFKTKSLYLSPPNEDTINRRKINELSIYEIRPTGKWSRMECDNLIRSVRVNYNINRQMSINKQLNTLHLKKNKVQFQDQLNEMTAEINALENNLEYIKSVGDNDVPPLNSNDHVDWLRVAETFLKDKHTPEECESFWHLYLNPHINKTSWSNEENEQIQELASVYQYQDWDTIALTLGTNRSGFAVCLHYFSNLCAKFKRNKFTNEEDELLLETVEKVRIGSYIPWNIVEQYFSNRSRNQLLHRYKYFNRHLNIIRGKFTEAEDIMIMILVDRFGRNYSQFVKYIPHRSCMQIKSRYSSNLNIDIKKGSFTVDEDRIILKYGDSESFKHWGCLTSMLKRSRGQLRQRFRIIKSFLRDNPDKTVENVTKRIHRSYNKEKNHYQFLRCMADQCKELQYIPTLEVIENMLGIKKSKRRVANTGGEKIVAKKNVGLKDIDSMLVDFFSTSCNINHKQNEIMPRKIIEGAENIFDILQDFSVELDLPEDIEENEYLDHIDVEILRHIQQKQKVITTDVSSSHIHRYIPPNTNTLTGLRSILIKNKLHKRKIKNKESLLDMVKPKRNTNDTDIIWQIEKNLARLDEVTKKIVIDERNKFCERFRSLFWWPSLLSLEPPNPNLLTSELGIENQNCDLNNDQGDKKNLKNSKNQPNSSNKRPTTKYVDLPAKKIKLSVPKIDQLSAASKMNLKPVDKSVITKMVLNGKRPTMFLVKNTKSVDGTVNTVMEPISDINKFLGNTHTVNSNLGVDSHQSAEPAICTVDLTTDLTLIENPSTKSISDARINLKRSHTKNKVEGGSIISKNLQAQVQARFKNVLKRSAVNKLPEKVHLKVCEMRNNVSQPSIVTKHKEHSESSTKNEELKDIEKLNSVLNGASLNKAHLIKDCSENELLKNDVELLHELIKYERNM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -