Ecoc044508.1
Basic Information
- Insect
- Endomychus coccineus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_958510875.1
- Location
- OY294069.1:183015300-183035719[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 2.8e-14 54.3 0.1 1 45 294 339 294 339 0.95 2 2 2.5e-17 5.7e-15 56.5 0.0 1 43 639 682 639 684 0.95
Sequence Information
- Coding Sequence
- ATGCTTAATTTATTGTTCGAAGGATTGGAACGAATAGCTGAAGAGTTAATGGGTCGTAGGAAATGGAAACTGTACCAAGAATCCATGTCCAGAAACTATTTACAACCGCTGAACAACAACGTGAAGACGAGAACAAACCAAGAGGAATACCACAAGGAATATTCAGGGTCCGACTCGGAGCAAACCGAAAACAAACACAACAACTATTACCACCAAGTGGTAAGAGACATTACTACTATTACTCCACGTCTAACAGACGTAGACGGAAAAGCGGAAATCAAAGAAAACGGCACCAACAGATCAAACACACCCGAACTGGACTTCAGAATCCAGGATTGGACTCCGCAGGACAAGTGCTACTTTTGTGTCGACGGCAAACTGGATAGTGAGCACAGTTCGCACGGGGTTCTGAGTCCCCGACATTCGGAATCTGACAGCACAGACAGTCATAGTGACAGTGAGACTCCCACATCTCTGACGCCTTCTTTCAAACTAACTAATAACCATAGACCTACTCCCCATCACCCGTCGCTGCCTGCGAGTATGACAACCATAGAAAGTATGGCCGCTTTAGCAGCCGCATTATCGGCGGGTAATTCCCCTGGTACTCCAACCCCTCATCTCCCATTTTATCATGGCATGCTCAGTCAGAACCTGTATTTCGCCAATGTGGCTAGAACTTTGCAAAACGAAAGGCTTACAACTGCGGACGTGGACAAAAGCACAGGGGAACAGCCTTTAGATCTTAGCAAAGGAGCCAGTAGTGGGGAGAAACTTCCCAACCACGTTCGACTTCCAACGTTGGAGACCAAACACATATTCAATTCTGATTTTAGAGCGAAACCTAGAATGTCGACGGTAGCCGGACGAAGAACCTACACCGAGGACGAACTTCAAGCGGCGCTGCGCGACATCCAATCGGGCAAACTGGGAACGCGACGCGCCGCCGTCATCTACGGCATACCGCGGTCCACGTTACGTAACAAAGTTTACAAACTGGCACTCGAGAGACAACGAGAAAACCATCTCAACAATTCCGCCCCTTTGAagattgaagaagaagaagtcatGGACGAGGAAAAAGAACTGTCCGGCGCGGAAGAAGAGAAGGAAGTCGAGAAGGCTCTAGAAGCTCCTCTATTAACCATGTCCGATATAATGATGATCTCCAAGATGGACTCGGTTCCGGACGCTCTGAAGACCATGTTGCAAAGGAACAAGGAAGGACCAGATGCATGGACGGGGATGGAACACGGTGAAATGACTCCCTACTTACAGAGTTTGATGATGGTATCCCAGAAACCACCGGACATGAACCAAATGGAATTTGTAAAACGTATGATGGCCGACGAACAGCTGTTAAAAATCCATCAGAAGTTGAATGGCGATAGTGATAAGATGATGAGGCCCATCCTGAGCGGTGGTGAGGGCAAGCCTGAGAAAACGAAATCAGAATCCGACATGGAAACTGAAGAATCGTCTTCGAACGTCATTCTCAAAATTCCGTCCTTTAAACCGAGTAAGAACGGTTCGGATCTGTTCAGGAGTATAGAAGGTGCGATGATGGTATCGCCACCAGTTAGTGACTCCAACTCGCCTCCCATCATGCAACCCAACAAACTGACCATCAAGGACGTTAAAGACGTCATAGCTCAAAGTATCAGTCAAAAATTCCAACAGAGCGGAGTCGAACCGATCAGAAGGCCAATAATGGAGATGGACTATAAAAGAAGTGATTTCACACCACCTTTGGCCACTGGTATTTCAGTTATCAAAACAAATCCTCAGGATATGAGTAGAGCTTATTCCTCAACTACAAACAAATCTCAACAACCACCCAGTAGTGGGAATTCGTCATCTTCATCGAGCGGCGGCAAAGGTACAAGACCGAAGCGTGGCAAATACAGGAATTATGACAGAGACAGTTTGGTGGAAGCCGTTCGCGCAGTGCAACGCGGAGAAATGTCCGTACACAGAGCCGGAAGTTACTACGGAGTACCTCATTCCACGTTAGAGTATAAAGTGAAAGAACGGCATCTGATGAGACCAAGGAAACGCGATCCCAAACCGAATCCGGTCGACGAAAAGATCGCCAGCCTGAAGCAGAACGATCTGATGCGCGGCAACCCGGACAAGCTGAAACCGGTCATCATGAAACCTCCCCAAAAATTCCCACCGACTTCGCCGAACGGCATGAAACTGCCCATGTTCGAAGCGGCTGGCATGTCCGCGTTGCCCGGTTATAACGCTCCGCCCCCTTTCCCTTTCTGGCCACATCCGAGTTTTCATCACATTCCCCTGGAATACGCCAGGAATCCCTCGTCTTCGACTCCGTTCACCACCAATCCGGAATTTTTCGCGTCGCAGATGATGCAGAAGTTACAAGAGGACGCGTCTAGGACATTAGGCGAACGCGGTGCTGGTGGCGGTGGCGGTGGTGGTTCTCAAAACTCGACGCCGCCGTCGACTACGCCGACGTTGGCCAAGAGCGCGAGACAAATGGCCGAATCGTTGTTGGACGGGACGGGTTCGAACGGTTCGTTCTTGGACGGAATAATCCGGTCGAGTTTGGAGTCGGGCGTGCCGAATACGGAGGAAAAACAATTGGCGAAGGAAGAGAAGAACGTGGCACCGGAGAATATGTCGAATAAGGCGTTGCTGGACCAGTTATGTAGAAACAGCAGATTGACACCATTGCCAAAACCTAACACGATAGACAACAATAGCTCGGGAGATGAGTCGTATCGAAAAGGATCGAGTCCGCTTCATTTTGTAACAGGAACGAGTATTAAAGAAGAAAGGATGGACGACTCGTCACCGAGTTACGAGCGCGACACCACCGACCTACACACAATAGAACTATCGAACGATTCGCACGAATCTTCGGACAAAAAACACCACCAATTCTCGTCTGACGAGTCTAAAGTACCTCTCACCGGTAGAATCTACCTGAAACAGGACCTGGTCAATCCAGACAATTTGAAACCGGAGAAGTTAGTGCGCTTTTTACCTGACATGGATAGAAACGGGGTTTGTGAAAACCCGGACAGTGCCTCAGATAACGACGCACCACAAGACTGA
- Protein Sequence
- MLNLLFEGLERIAEELMGRRKWKLYQESMSRNYLQPLNNNVKTRTNQEEYHKEYSGSDSEQTENKHNNYYHQVVRDITTITPRLTDVDGKAEIKENGTNRSNTPELDFRIQDWTPQDKCYFCVDGKLDSEHSSHGVLSPRHSESDSTDSHSDSETPTSLTPSFKLTNNHRPTPHHPSLPASMTTIESMAALAAALSAGNSPGTPTPHLPFYHGMLSQNLYFANVARTLQNERLTTADVDKSTGEQPLDLSKGASSGEKLPNHVRLPTLETKHIFNSDFRAKPRMSTVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERQRENHLNNSAPLKIEEEEVMDEEKELSGAEEEKEVEKALEAPLLTMSDIMMISKMDSVPDALKTMLQRNKEGPDAWTGMEHGEMTPYLQSLMMVSQKPPDMNQMEFVKRMMADEQLLKIHQKLNGDSDKMMRPILSGGEGKPEKTKSESDMETEESSSNVILKIPSFKPSKNGSDLFRSIEGAMMVSPPVSDSNSPPIMQPNKLTIKDVKDVIAQSISQKFQQSGVEPIRRPIMEMDYKRSDFTPPLATGISVIKTNPQDMSRAYSSTTNKSQQPPSSGNSSSSSSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLMRGNPDKLKPVIMKPPQKFPPTSPNGMKLPMFEAAGMSALPGYNAPPPFPFWPHPSFHHIPLEYARNPSSSTPFTTNPEFFASQMMQKLQEDASRTLGERGAGGGGGGGSQNSTPPSTTPTLAKSARQMAESLLDGTGSNGSFLDGIIRSSLESGVPNTEEKQLAKEEKNVAPENMSNKALLDQLCRNSRLTPLPKPNTIDNNSSGDESYRKGSSPLHFVTGTSIKEERMDDSSPSYERDTTDLHTIELSNDSHESSDKKHHQFSSDESKVPLTGRIYLKQDLVNPDNLKPEKLVRFLPDMDRNGVCENPDSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -