Basic Information

Insect: Encarsia formosa
Gene Symbol: -
Assembly: GCA_030522645.1
Location: JAPYYY010003015.1:11907-21599[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.11 32 7.0 4.0 1 19 136 154 136 157 0.91

2 7 0.023 6.6 9.1 4.9 1 23 165 188 165 188 0.96

3 7 0.00065 0.19 14.0 2.8 1 23 226 249 226 249 0.97

4 7 0.00011 0.031 16.5 0.5 2 22 258 278 258 278 0.95

5 7 0.0067 1.9 10.8 1.6 2 23 291 313 290 313 0.94

6 7 0.76 2.2e+02 4.4 0.2 5 19 325 339 322 342 0.83

7 7 0.00091 0.26 13.6 2.8 1 23 357 380 357 380 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.11	32	7.0	4.0	1	19	136	154	136	157	0.91
2	7	0.023	6.6	9.1	4.9	1	23	165	188	165	188	0.96
3	7	0.00065	0.19	14.0	2.8	1	23	226	249	226	249	0.97
4	7	0.00011	0.031	16.5	0.5	2	22	258	278	258	278	0.95
5	7	0.0067	1.9	10.8	1.6	2	23	291	313	290	313	0.94
6	7	0.76	2.2e+02	4.4	0.2	5	19	325	339	322	342	0.83
7	7	0.00091	0.26	13.6	2.8	1	23	357	380	357	380	0.95

Sequence Information

Coding Sequence: ATGATCGTTTTATCAAATTACATGCTCTGCGACGGAGGTTGCAACGAGTGCATGAAATTAGGTATCAAGCAAGCAACGACGGGGTTAAAAGCGACTGCGACAGGTGCCCGGGTAGGCCGGTTATGGGCGTGTCCACCCGGGATTGGCGGAGGCTCGTTCTCTCGCGAGTACCCGCACGCGAGGAGAGGGAGGCCTAATTGCATCCCGCGGCTGCACCCGTTCCCTTCGCTTCCGCTCGAGTCCACTCGAGTCTGTGTCGATGGCTTCTTTTACCCAACGCCGCCTGGAATGCATTTTGCTGACCGAAAATACAATAGGTTGAACTACTGCAGTCAATGCAGCAGAATTTGGCAACTTTCCAAGCATAAGAACAGCAAATGTGCAGTGTGTGCATCTGTTCTCGCATACAAGTGTAGAAAATGTGGGAAAGTTTGTTCGTCAATCAAAGGATTCCATGATCACTCTTATCGCTATTGCAACAAGGAGCCAAGATTTTTCTGTGACCAGTGCAACTTCAAGAGTTACCAGAAAGTACACCTCACTTATCACATTCAAACAAAACATTTACCTCCAGATCCAACTTTGAAAAAGTGCAGCAGCTGTAGACATTTTTATGCTTACAGCAAGCTGGACGAACACATAAAAATCTGCTGTGACAGAAGAAAATCTAAGAGATTTTACTGCGATATTTGTGGATACCAGTGCAGTGGAAAAAGTAGACTTTCAAGTCACATGCAGTCGAAGCATCTACCCCAAGACCCAAATACAAACACTTGCAATAGATGTGGAAAAAGATTGGTTGACTCGTCAGGTCTGAAAAGACACTTGAAAACATGTGGTAAATTGGTAAACTTCAGAGTAAAGCACTTGTCATGTGACCACTGCGATTACAAAACTGGCATGAAGTCAAATATGTACGCTCACATGAAAGCAAAGCATCTACCAAGAGATCCTAACTCGAACAAATGCATCAGATGTGGTAAAAGCTTCAGATGGCCTAATAAATTGAGGGAACATTCTGAAGTTTGTGGTATGGAACTACTCAAAATATTGTCTGGATTGAAGCGTTTTTCTTGCGAACACTGTGATTACAAAGCACGTTTCAAATCTTACTTAAAAGAACACATGCTGGCAAGACATTTACCAAAGGATCCTAACTTGTACAACTTATACGCGGTAAGAGGAGAAATTTTCTTCGCAGCACCCAATGGTACCACCATGAAGTTGAAAACGTTTCCTCAAGACGTCACTGCTTTCGCGACGCACAACAATCACTTGTACGTATCGGTGAAGCGCAGCAGCAAAGAAGAAATGAACAGTGGAATATGGCGTGTCAACTCAACGAACCTAGCCGAATCGAAAGACAACAATTGGCAAGAGTTCCGGGTGGTAAACGCAGCCTACGCAGATCTACTATGCATGGTCATCGCGAAAGGTCACATCTACTCTGGTCGCAGCGACGGCGTGGTATGGAGATGTTCAGCTGACGATCCGGACAAGTGTCAAGATTGGATCAATCTGGAAAAACCCGTGACCAATTTGGATTACAATCCCGGTGCCAACGAATTGTACGCGATCCTGGGGATTTATATCGGGGACAAGTCGGTCTCGAGGTTCTGGCGATGCTCCCCGGACACAGCAAATTACTGCAATTTGCAGACGTTTCAGTCCAGGTATGAAATGACTATTCACATAGCTTTTGGTGCCATTTGGATTGGCAAAAACATAGGACAACTGCGGAAGTGTCCTTTGGACTTCGGGAGTAAGGAGTTTACATCCAGGCAAAAAAATTGTCTCGATGTCTTGGACTTTGATCTACCGAAGAGTATGAGTATCGTTTCTTCGAGTGATTATTTGTACGTTCACGCGGAACACGGTAAATACATCTGGCGTTGCGACCCTGAAAAGACAGAAAAATCTTGCACCAAAGTGATTAAAGTATCGGATGGACAAAACATGGGCCCTTTCataatgatttaa
Protein Sequence: MIVLSNYMLCDGGCNECMKLGIKQATTGLKATATGARVGRLWACPPGIGGGSFSREYPHARRGRPNCIPRLHPFPSLPLESTRVCVDGFFYPTPPGMHFADRKYNRLNYCSQCSRIWQLSKHKNSKCAVCASVLAYKCRKCGKVCSSIKGFHDHSYRYCNKEPRFFCDQCNFKSYQKVHLTYHIQTKHLPPDPTLKKCSSCRHFYAYSKLDEHIKICCDRRKSKRFYCDICGYQCSGKSRLSSHMQSKHLPQDPNTNTCNRCGKRLVDSSGLKRHLKTCGKLVNFRVKHLSCDHCDYKTGMKSNMYAHMKAKHLPRDPNSNKCIRCGKSFRWPNKLREHSEVCGMELLKILSGLKRFSCEHCDYKARFKSYLKEHMLARHLPKDPNLYNLYAVRGEIFFAAPNGTTMKLKTFPQDVTAFATHNNHLYVSVKRSSKEEMNSGIWRVNSTNLAESKDNNWQEFRVVNAAYADLLCMVIAKGHIYSGRSDGVVWRCSADDPDKCQDWINLEKPVTNLDYNPGANELYAILGIYIGDKSVSRFWRCSPDTANYCNLQTFQSRYEMTIHIAFGAIWIGKNIGQLRKCPLDFGSKEFTSRQKNCLDVLDFDLPKSMSIVSSSDYLYVHAEHGKYIWRCDPEKTEKSCTKVIKVSDGQNMGPFIMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -