Efor000995.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- ZEB2
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010000141.1:37454-41284[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0017 0.48 12.7 2.0 3 22 60 79 59 79 0.94 2 14 0.042 12 8.3 1.4 2 21 98 117 97 118 0.93 3 14 0.0033 0.95 11.8 1.0 1 22 146 167 146 170 0.91 4 14 2 5.7e+02 3.1 3.3 1 23 203 228 203 229 0.86 5 14 0.038 11 8.5 0.2 2 23 339 360 338 360 0.95 6 14 0.5 1.4e+02 4.9 1.1 1 23 603 626 603 626 0.91 7 14 0.0055 1.6 11.1 10.0 1 23 632 655 632 655 0.98 8 14 0.0043 1.2 11.4 2.7 1 23 663 686 663 686 0.95 9 14 0.00085 0.24 13.6 3.7 1 23 692 714 692 714 0.95 10 14 1.4e-05 0.0041 19.2 1.5 1 23 719 741 719 741 0.97 11 14 7.6e-05 0.022 17.0 1.8 1 23 747 769 747 769 0.98 12 14 4.5e-07 0.00013 24.0 0.5 1 23 773 795 773 795 0.98 13 14 0.00015 0.042 16.0 0.1 2 23 802 823 801 823 0.94 14 14 0.00058 0.17 14.2 0.4 1 23 829 852 829 852 0.98
Sequence Information
- Coding Sequence
- ATGGAGATAGAAATGATAAAAACCCAGATGAAGGAGTTTCAAGGCCTGGTAATCAAAGACTATCCCATTCCTCTGCCTGTTGCACCACCACAAGCAACAGCTTGCACGCGCGGCTTCGAAGaggagaagaagaggaggaagaagaaaacgaAGAACGCGTTCTTCAAGAAGCCCTACTGCCAGAGCTGCCAGAAGTGCTTCAAGAACTCCTGGGGTCTTTCGGTCCACCAGCGCAGTTGCTCCCCGCTGCATTCTCTGGCGGTCAGGCCGCACGTGGTAAATCCCCTGATAACCTGCAAGGACTGCAAGTCATCGTTCTCGTCGACCCGAGAATTTTTCGAACACCGCCAGTTCCTCGACTGTCGGCTTTTGTCCTTCGATGAAGAGTCCGACCTGTCCGAGAACACCGACGAGGAGTACGAGTACGACTACCTGTACACGTGCAGGGATTGCAAGGCAAAGTTCGTATTCAAGGAGCTGCTGACCATACACAGAATCCGGGAGAAGCACCTTGGTCAGAACAAAAGCATCCCCGAGGAGGACTACGTGCCTCTCAAAGCGGACTCCGCGGAGGACTTTAGCTTCATAAGCACCAAGGAGGGCGAGTACTCGTGCTCGGCTTGTAACAACGGGTTCGTCTACCACGACCTCGACAACCTCCTGAAGCACCACCGAGTGGTACACCACAGCATGTCCGACATCTACTGCAGGTATTGCTGTTGCAAGCTGAACAGCCTCACGGACTTTGAGGAGCACCACAGGGTCTACCACGAGTTACAGAGGTATTGCAGGGTCTGCAGCGACGACGACTTCAGCAACTACGACGCCCTACCGCCCAAGCCGGTGTGCCTCATCTGCTGCTGGAAGTTCGGTATGCCCTTCGACAACTGCCTGGCCCTGCTCAAGGAGAACCTCTACTGCGACGACTGCGAGCGCGTCCTCCCCAACCTCGCATCTATCAAGTTCCACAACTGCGACAAGAGGAAGGACCCATTTCTGACGGTGCCCCTTCTGGTTTGCCCTTTGTGCCTGGACACCTTTAACAGTCTGAGGTCACTGTATCGGCATATCGTTAAACACAACGACAAGTTGCCCTTCGAGTGCCACGTTTGCGATAGTGGTCACGAGACTCTCAAGGCGGTCAAGGAACACATTCAGAAGTGTCATTTCAACGAGGAGCTCAGGCTGCCCAAGGTCGACACCCTGACGCTGAGGAAGAGCGCCGAGGAGGTGATCGACAAGTCACAGTCTCGATCATCCAAAGGAGTCACTTTGGTCGACGTTAAATCCGAGTTTCCCAGTCAGCAGCCGCACCAAGTTGTCAGCTCTCAGGAACCGTACATAATAGTCCCAAACCCGAACCAGCCGGGCCAACTGCTGCTAGTACAGCAAACTCAGCCTCAGAAACTGCCCCGGTCGTCAGCTTACATGGTTGTACCACACCCACAGGATCCGGAAAAGAAGCTCATAATCCAGACTTCCGACCCGATGCTGGAGCAGACCCAGACTAAACCGAAAAAACGACCCGGAGAACTGAAGCGAAAATCGATCTCGGCAAGGGACCCAATCGATCCGCTGTCCGACGAGGCTACCGCCAAAAAAGCCAGGGTCGCTAAACCCAGAGCGCCCAGAAAAACGAAGGCAACGAAGTCTCAGCAAGTGAAAAGTTTACCTACTGAGCAGGTAGAGTCGAGCTTGCCCAAAGAACCTGAGAAAAACGAAAACGACACCGACGAGGACGACGGTGACGACGGTCAGGACAACGAGCCGGTGAAGGAGATCTACTCCCGCATAAAACCCGGCGTTTATCAGTGCAACGTCTGCGAGTGCACTCGTCCTGACCGTCGCTCGGTCCTGTCGCACATCTACGGCCAGCACTCGCACCTGAAGCCTTTCAAATGTTCCGTGTGCGACAGGCACTTCAAGCGCAAGTGCTCCATGCGCCATCACGAGAATACCACGCACTTCAAGGTGTCGACCGAAGTCTTTCCCTGCGAAAAGTGCGACTACAGTTCGACCAGCAAAGTCTGCCTGCGTACGCACGTATACAGAATGCACACCGACGAGTACAGGTTCACCTGCGAGCACTGCGGAAAGATGTTCAAAATTAAGCGAGAAATGCAAGAACACTTGGTCCATCATAACAACGAGTCTCACATGTGCGATATTTGCGGCAAGGTTTATCGCGGCCCTCACCTTCTCCGCGTTCATAGGAGACTACACCTGGACCTCTACAAGTTCCAGTGCGCCAAGTGTAAGAAGAAACTGAGCTCCCAGGAGAGCCTGGACAAGCACATGAAGCTGCACGCGAGGATATTCGAGTGCGACGAGTGCGGTATGAAGTTCCCTAGCAAGTATAACCTCATCAAGCACAGAAATGTTCACACCAGGGAGCAGGCTGTCCCGTGTCCAGACTGCGGAAAAATTTTCACCGACGAGAGCACTCAGAAAGTCCACTCGCTCATTCACGCGGGCTTGAAGCCCTACAGGTGCAACGTTTGCGGTGTAGGGTTCTCGCAGAGGACGCCGATGATGTTGCATTGGAGGAAGAAGCACCCAGGAGAGACTGAACCGCCTCCGCCGGTCATCCTGAAGAACATACTGCAGAATATCGAGAAACAGAAGAAGAAGTCGCAGGAGGACAACGGTTCTTAG
- Protein Sequence
- MEIEMIKTQMKEFQGLVIKDYPIPLPVAPPQATACTRGFEEEKKRRKKKTKNAFFKKPYCQSCQKCFKNSWGLSVHQRSCSPLHSLAVRPHVVNPLITCKDCKSSFSSTREFFEHRQFLDCRLLSFDEESDLSENTDEEYEYDYLYTCRDCKAKFVFKELLTIHRIREKHLGQNKSIPEEDYVPLKADSAEDFSFISTKEGEYSCSACNNGFVYHDLDNLLKHHRVVHHSMSDIYCRYCCCKLNSLTDFEEHHRVYHELQRYCRVCSDDDFSNYDALPPKPVCLICCWKFGMPFDNCLALLKENLYCDDCERVLPNLASIKFHNCDKRKDPFLTVPLLVCPLCLDTFNSLRSLYRHIVKHNDKLPFECHVCDSGHETLKAVKEHIQKCHFNEELRLPKVDTLTLRKSAEEVIDKSQSRSSKGVTLVDVKSEFPSQQPHQVVSSQEPYIIVPNPNQPGQLLLVQQTQPQKLPRSSAYMVVPHPQDPEKKLIIQTSDPMLEQTQTKPKKRPGELKRKSISARDPIDPLSDEATAKKARVAKPRAPRKTKATKSQQVKSLPTEQVESSLPKEPEKNENDTDEDDGDDGQDNEPVKEIYSRIKPGVYQCNVCECTRPDRRSVLSHIYGQHSHLKPFKCSVCDRHFKRKCSMRHHENTTHFKVSTEVFPCEKCDYSSTSKVCLRTHVYRMHTDEYRFTCEHCGKMFKIKREMQEHLVHHNNESHMCDICGKVYRGPHLLRVHRRLHLDLYKFQCAKCKKKLSSQESLDKHMKLHARIFECDECGMKFPSKYNLIKHRNVHTREQAVPCPDCGKIFTDESTQKVHSLIHAGLKPYRCNVCGVGFSQRTPMMLHWRKKHPGETEPPPPVILKNILQNIEKQKKKSQEDNGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -